Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006197 17 3301 XP_006714104 17 3301 XP_005265800 17 3301 XP_006714103 17 3301 XP_006714102 17 3301 NP_004326 16 5631 NP_001191236 16 7355 NP_001191235 16 7355 NP_000574 16 7355 NP_004435 16 7355 NP_001008487 16 7355 NP_001008486 16 7355 NP_001008485 16 7355 NP_060306 16 7355 NP_001157947 16 7355 XP_005271680 16 7355 XP_005271679 16 7355 XP_005271678 16 7355 XP_005271676 16 7355 XP_005271681 16 7355 XP_006718955 16 7355 XP_006718954 16 7355 XP_006718953 16 7355 XP_006718950 16 7355 XP_005273894 16 7355 XP_006714240 16 7355 XP_005247622 16 7355 XP_005247621 16 7355 XP_006713744 16 7355 XP_005247620 16 7355 XP_005247619 16 7355 XP_005247618 16 7355 XP_005247617 16 7355 XP_005247616 16 7355 NP_878253 16 7355 NP_006718 15 9605 NP_001017922 15 9605 NP_061008 15 9605 NP_001152849 15 9605 NP_001152850 15 9605 NP_073601 15 9605 NP_001152851 15 9605 NP_001152852 15 9605 NP_057363 15 9605 XP_005256170 15 9605 XP_005256156 15 9605 XP_005256164 15 9605 XP_005256158 15 9605 XP_005256160 15 9605 XP_005256157 15 9605 XP_006710376 15 9605 XP_005270472 15 9605>NP_006197 Length = 1089 Score = 16.9 bits (32), Expect = 3301 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VLVLLVIV 9 VLVLLVIV Sbjct: 531 VLVLLVIV 538>XP_006714104 Length = 832 Score = 16.9 bits (32), Expect = 3301 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VLVLLVIV 9 VLVLLVIV Sbjct: 556 VLVLLVIV 563>XP_005265800 Length = 1089 Score = 16.9 bits (32), Expect = 3301 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VLVLLVIV 9 VLVLLVIV Sbjct: 531 VLVLLVIV 538>XP_006714103 Length = 1111 Score = 16.9 bits (32), Expect = 3301 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VLVLLVIV 9 VLVLLVIV Sbjct: 553 VLVLLVIV 560>XP_006714102 Length = 1114 Score = 16.9 bits (32), Expect = 3301 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VLVLLVIV 9 VLVLLVIV Sbjct: 556 VLVLLVIV 563>NP_004326 Length = 180 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VLVLLVIV 9 +LVLL+IV Sbjct: 28 ILVLLIIV 35>NP_001191236 Length = 493 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 RVLVLLVIV 9 RVLVLL+ V Sbjct: 22 RVLVLLLAV 30>NP_001191235 Length = 474 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 RVLVLLVIV 9 RVLVLL+ V Sbjct: 3 RVLVLLLAV 11>NP_000574 Length = 474 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 RVLVLLVIV 9 RVLVLL+ V Sbjct: 3 RVLVLLLAV 11>NP_004435 Length = 987 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 VLVLLVIV 9 VLVL+VIV Sbjct: 550 VLVLVVIV 557>NP_001008487 Length = 461 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RVLVLLVI 8 RVL+LLV+ Sbjct: 350 RVLLLLVV 357>NP_001008486 Length = 471 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RVLVLLVI 8 RVL+LLV+ Sbjct: 340 RVLLLLVV 347>NP_001008485 Length = 507 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RVLVLLVI 8 RVL+LLV+ Sbjct: 376 RVLLLLVV 383>NP_060306 Length = 487 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RVLVLLVI 8 RVL+LLV+ Sbjct: 376 RVLLLLVV 383>NP_001157947 Length = 370 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RVLVLLVI 8 RVL+LLV+ Sbjct: 259 RVLLLLVV 266>XP_005271680 Length = 713 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 VLVLLVIV 9 VLVLLVI+ Sbjct: 590 VLVLLVIL 597>XP_005271679 Length = 713 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 VLVLLVIV 9 VLVLLVI+ Sbjct: 590 VLVLLVIL 597>XP_005271678 Length = 713 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 VLVLLVIV 9 VLVLLVI+ Sbjct: 590 VLVLLVIL 597>XP_005271676 Length = 753 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 VLVLLVIV 9 VLVLLVI+ Sbjct: 630 VLVLLVIL 637>XP_005271681 Length = 772 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 VLVLLVIV 9 VLVLLVI+ Sbjct: 649 VLVLLVIL 656>XP_006718955 Length = 796 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 VLVLLVIV 9 VLVLLVI+ Sbjct: 673 VLVLLVIL 680>XP_006718954 Length = 877 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 VLVLLVIV 9 VLVLLVI+ Sbjct: 773 VLVLLVIL 780>XP_006718953 Length = 881 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 VLVLLVIV 9 VLVLLVI+ Sbjct: 758 VLVLLVIL 765>XP_006718950 Length = 896 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 VLVLLVIV 9 VLVLLVI+ Sbjct: 773 VLVLLVIL 780>XP_005273894 Length = 520 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 RVLVLLVIV 9 ++L+LLVI+ Sbjct: 69 KILILLVIL 77>XP_006714240 Length = 425 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 RVLVLLVIV 9 RVLVLL+ V Sbjct: 3 RVLVLLLAV 11>XP_005247622 Length = 481 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RVLVLLVI 8 RVL+LLV+ Sbjct: 350 RVLLLLVV 357>XP_005247621 Length = 502 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RVLVLLVI 8 RVL+LLV+ Sbjct: 391 RVLLLLVV 398>XP_006713744 Length = 507 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RVLVLLVI 8 RVL+LLV+ Sbjct: 376 RVLLLLVV 383>XP_005247620 Length = 507 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RVLVLLVI 8 RVL+LLV+ Sbjct: 376 RVLLLLVV 383>XP_005247619 Length = 507 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RVLVLLVI 8 RVL+LLV+ Sbjct: 376 RVLLLLVV 383>XP_005247618 Length = 507 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RVLVLLVI 8 RVL+LLV+ Sbjct: 376 RVLLLLVV 383>XP_005247617 Length = 522 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RVLVLLVI 8 RVL+LLV+ Sbjct: 391 RVLLLLVV 398>XP_005247616 Length = 522 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RVLVLLVI 8 RVL+LLV+ Sbjct: 391 RVLLLLVV 398>NP_878253 Length = 520 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 RVLVLLVIV 9 ++L+LLVI+ Sbjct: 69 KILILLVIL 77>NP_006718 Length = 788 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VLVLLVIV 9 +++LLVIV Sbjct: 621 IIILLVIV 628>NP_001017922 Length = 475 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VLVLLVIV 9 VLVLL++V Sbjct: 164 VLVLLIMV 171>NP_061008 Length = 475 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VLVLLVIV 9 VLVLL++V Sbjct: 164 VLVLLIMV 171>NP_001152849 Length = 383 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 RVLVLLVIV 9 RVLV LV+V Sbjct: 131 RVLVDLVVV 139>NP_001152850 Length = 383 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 RVLVLLVIV 9 RVLV LV+V Sbjct: 131 RVLVDLVVV 139>NP_073601 Length = 382 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 RVLVLLVIV 9 RVLV LV+V Sbjct: 130 RVLVDLVVV 138>NP_001152851 Length = 382 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 RVLVLLVIV 9 RVLV LV+V Sbjct: 130 RVLVDLVVV 138>NP_001152852 Length = 363 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 RVLVLLVIV 9 RVLV LV+V Sbjct: 111 RVLVDLVVV 119>NP_057363 Length = 789 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VLVLLVIV 9 VL+LL++V Sbjct: 623 VLILLILV 630>XP_005256170 Length = 363 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 RVLVLLVIV 9 RVLV LV+V Sbjct: 111 RVLVDLVVV 119>XP_005256156 Length = 363 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 RVLVLLVIV 9 RVLV LV+V Sbjct: 111 RVLVDLVVV 119>XP_005256164 Length = 231 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 RVLVLLVIV 9 RVLV LV+V Sbjct: 131 RVLVDLVVV 139>XP_005256158 Length = 363 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 RVLVLLVIV 9 RVLV LV+V Sbjct: 111 RVLVDLVVV 119>XP_005256160 Length = 363 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 RVLVLLVIV 9 RVLV LV+V Sbjct: 111 RVLVDLVVV 119>XP_005256157 Length = 363 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 RVLVLLVIV 9 RVLV LV+V Sbjct: 111 RVLVDLVVV 119>XP_006710376 Length = 475 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VLVLLVIV 9 VLVLL++V Sbjct: 164 VLVLLIMV 171>XP_005270472 Length = 536 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VLVLLVIV 9 VLVLL++V Sbjct: 225 VLVLLIMV 232Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.358 0.175 0.413 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 260,427 Number of extensions: 512 Number of successful extensions: 52 Number of sequences better than 10000.0: 52 Number of HSP's gapped: 52 Number of HSP's successfully gapped: 52 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 14 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (17.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |