Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 18 1135 NP_001075109 18 1135 NP_001243372 16 5631 NP_001243371 16 5631 NP_660282 16 5631 NP_001073883 16 5631 NP_001254 16 5631 XP_006721069 16 5631 XP_005267748 16 5631 XP_005262744 16 5631 NP_003010 16 7355 NP_001035924 16 7355 NP_878913 16 7355 NP_075068 16 7355 XP_006723231 16 7355 XP_005258877 16 7355 XP_005258876 16 7355 NP_054756 16 7355 NP_056160 15 9605 NP_001188356 15 9605 NP_056036 15 9605 NP_060285 15 9605 NP_055833 15 9605 NP_001186871 15 9605 NP_071926 15 9605 NP_001159742 15 9605 NP_001159741 15 9605 NP_005984 15 9605 XP_005258567 15 9605 XP_006722353 15 9605 XP_005256453 15 9605 XP_006717798 15 9605 XP_006715464 15 9605 XP_006715463 15 9605 XP_006715462 15 9605 XP_006715461 15 9605 XP_006715460 15 9605 XP_006715459 15 9605 XP_006715458 15 9605 XP_006715457 15 9605 XP_006715456 15 9605 XP_006715109 15 9605 XP_006715108 15 9605 XP_006715107 15 9605 XP_006715106 15 9605 XP_006715105 15 9605 XP_006715104 15 9605 XP_006715103 15 9605 XP_006715102 15 9605 XP_006714856 15 9605 XP_005268556 15 9605 XP_006714855 15 9605 XP_006714854 15 9605 XP_005268555 15 9605 XP_005268554 15 9605 NP_789780 15 9605>NP_008835 Length = 4128 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RVLQQLIVA 9 RVL+QLIVA Sbjct: 1712 RVLEQLIVA 1720>NP_001075109 Length = 4097 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RVLQQLIVA 9 RVL+QLIVA Sbjct: 1712 RVLEQLIVA 1720>NP_001243372 Length = 299 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RVLQQLI 7 RVLQQL+ Sbjct: 217 RVLQQLV 223>NP_001243371 Length = 394 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RVLQQLI 7 RVLQQL+ Sbjct: 217 RVLQQLV 223>NP_660282 Length = 340 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RVLQQLI 7 RVLQQL+ Sbjct: 217 RVLQQLV 223>NP_001073883 Length = 2028 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 VLQQLIV 8 VLQQLIV Sbjct: 92 VLQQLIV 98>NP_001254 Length = 461 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RVLQQLIV 8 +VLQQL+V Sbjct: 425 KVLQQLLV 432>XP_006721069 Length = 340 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RVLQQLI 7 RVLQQL+ Sbjct: 217 RVLQQLV 223>XP_005267748 Length = 1535 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 VLQQLIV 8 VLQQLIV Sbjct: 92 VLQQLIV 98>XP_005262744 Length = 421 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RVLQQLIV 8 +VLQQL+V Sbjct: 385 KVLQQLLV 392>NP_003010 Length = 375 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LQQLIVA 9 LQQL+VA Sbjct: 300 LQQLVVA 306>NP_001035924 Length = 1133 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RVLQQLIVA 9 R+L QL+VA Sbjct: 156 RILGQLLVA 164>NP_878913 Length = 1135 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RVLQQLIVA 9 R+L QL+VA Sbjct: 156 RILGQLLVA 164>NP_075068 Length = 1146 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RVLQQLIV 8 ++LQQL+V Sbjct: 968 QILQQLVV 975>XP_006723231 Length = 736 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LQQLIVA 9 LQQL+VA Sbjct: 322 LQQLVVA 328>XP_005258877 Length = 736 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LQQLIVA 9 LQQL+VA Sbjct: 322 LQQLVVA 328>XP_005258876 Length = 818 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LQQLIVA 9 LQQL+VA Sbjct: 404 LQQLVVA 410>NP_054756 Length = 736 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LQQLIVA 9 LQQL+VA Sbjct: 322 LQQLVVA 328>NP_056160 Length = 1067 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 RVLQQLIV 8 R+LQQ+++ Sbjct: 403 RILQQIVL 410>NP_001188356 Length = 1068 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 RVLQQLIV 8 R+LQQ+++ Sbjct: 403 RILQQIVL 410>NP_056036 Length = 1577 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 RVLQQLIV 8 RVLQQL V Sbjct: 1227 RVLQQLQV 1234>NP_060285 Length = 363 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RVLQQLIV 8 RV+Q+L+V Sbjct: 86 RVIQELLV 93>NP_055833 Length = 2465 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RVLQQLIV 8 +VLQ+LIV Sbjct: 1584 KVLQRLIV 1591>NP_001186871 Length = 2476 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RVLQQLIV 8 +VLQ+LIV Sbjct: 1575 KVLQRLIV 1582>NP_071926 Length = 1544 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RVLQQLI 7 RVLQ+LI Sbjct: 1075 RVLQELI 1081>NP_001159742 Length = 318 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RVLQQLIV 8 RV+Q+L+V Sbjct: 86 RVIQELLV 93>NP_001159741 Length = 363 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RVLQQLIV 8 RV+Q+L+V Sbjct: 86 RVIQELLV 93>NP_005984 Length = 1192 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RVLQQLIV 8 RV++QL+V Sbjct: 360 RVIEQLLV 367>XP_005258567 Length = 1036 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLQQLIVA 9 VLQ LI+A Sbjct: 770 VLQDLIIA 777>XP_006722353 Length = 1165 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RVLQQLIV 8 RV++QL+V Sbjct: 360 RVIEQLLV 367>XP_005256453 Length = 1175 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RVLQQLIV 8 RV++QL+V Sbjct: 343 RVIEQLLV 350>XP_006717798 Length = 1534 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 RVLQQLIV 8 RVLQQL V Sbjct: 1184 RVLQQLQV 1191>XP_006715464 Length = 2027 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RVLQQLIV 8 +VLQ+LIV Sbjct: 1584 KVLQRLIV 1591>XP_006715463 Length = 2434 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RVLQQLIV 8 +VLQ+LIV Sbjct: 1584 KVLQRLIV 1591>XP_006715462 Length = 2452 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RVLQQLIV 8 +VLQ+LIV Sbjct: 1551 KVLQRLIV 1558>XP_006715461 Length = 2456 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RVLQQLIV 8 +VLQ+LIV Sbjct: 1575 KVLQRLIV 1582>XP_006715460 Length = 2465 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RVLQQLIV 8 +VLQ+LIV Sbjct: 1584 KVLQRLIV 1591>XP_006715459 Length = 2475 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RVLQQLIV 8 +VLQ+LIV Sbjct: 1574 KVLQRLIV 1581>XP_006715458 Length = 2476 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RVLQQLIV 8 +VLQ+LIV Sbjct: 1575 KVLQRLIV 1582>XP_006715457 Length = 2485 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RVLQQLIV 8 +VLQ+LIV Sbjct: 1584 KVLQRLIV 1591>XP_006715456 Length = 2485 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RVLQQLIV 8 +VLQ+LIV Sbjct: 1584 KVLQRLIV 1591>XP_006715109 Length = 1077 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 RVLQQLIV 8 R+LQQ+++ Sbjct: 403 RILQQIVL 410>XP_006715108 Length = 1077 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 RVLQQLIV 8 R+LQQ+++ Sbjct: 403 RILQQIVL 410>XP_006715107 Length = 1077 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 RVLQQLIV 8 R+LQQ+++ Sbjct: 403 RILQQIVL 410>XP_006715106 Length = 1077 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 RVLQQLIV 8 R+LQQ+++ Sbjct: 403 RILQQIVL 410>XP_006715105 Length = 1077 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 RVLQQLIV 8 R+LQQ+++ Sbjct: 403 RILQQIVL 410>XP_006715104 Length = 1111 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 RVLQQLIV 8 R+LQQ+++ Sbjct: 437 RILQQIVL 444>XP_006715103 Length = 1167 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 RVLQQLIV 8 R+LQQ+++ Sbjct: 502 RILQQIVL 509>XP_006715102 Length = 1176 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 RVLQQLIV 8 R+LQQ+++ Sbjct: 502 RILQQIVL 509>XP_006714856 Length = 1346 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RVLQQLI 7 RVLQ+LI Sbjct: 877 RVLQELI 883>XP_005268556 Length = 1466 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RVLQQLI 7 RVLQ+LI Sbjct: 997 RVLQELI 1003>XP_006714855 Length = 1473 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RVLQQLI 7 RVLQ+LI Sbjct: 1004 RVLQELI 1010>XP_006714854 Length = 1486 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RVLQQLI 7 RVLQ+LI Sbjct: 1017 RVLQELI 1023>XP_005268555 Length = 1524 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RVLQQLI 7 RVLQ+LI Sbjct: 1055 RVLQELI 1061>XP_005268554 Length = 1531 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RVLQQLI 7 RVLQ+LI Sbjct: 1075 RVLQELI 1081>NP_789780 Length = 1043 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLQQLIVA 9 VLQ LI+A Sbjct: 770 VLQDLIIA 777Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.342 0.149 0.349 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 352,898 Number of extensions: 428 Number of successful extensions: 56 Number of sequences better than 10000.0: 56 Number of HSP's gapped: 56 Number of HSP's successfully gapped: 56 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |