Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005742 18 1135 NP_671714 18 1135 XP_006715890 18 1135 XP_005250160 18 1135 XP_005250159 18 1135 NP_940953 17 4312 NP_005605 17 4312 XP_006716144 17 4312 XP_005273179 17 4312 XP_006711367 17 4312 XP_005273178 17 4312 XP_005244985 16 5631 NP_001186456 16 7355 NP_001186457 16 7355 NP_001004416 16 7355 NP_775839 16 7355 NP_001275635 15 9605 NP_060502 15 9605 NP_958815 15 9605 NP_000868 15 9605 NP_065759 15 9605 NP_001128243 15 9605 NP_009106 15 9605 NP_001252 15 9605 NP_001964 15 9605 NP_055524 15 9605 NP_005018 15 9605 NP_065825 15 9605 XP_006720967 15 9605 XP_005255486 15 9605 XP_005255485 15 9605 XP_005255484 15 9605 XP_006720966 15 9605 XP_005255483 15 9605 XP_006716343 15 9605 XP_005273449 15 9605 XP_005273448 15 9605 XP_005263991 15 9605 XP_005263989 15 9605 XP_005263990 15 9605 XP_005263988 15 9605 XP_005263987 15 9605 XP_005263986 15 9605 XP_005245008 15 9605 XP_005245007 15 9605 NP_068567 15 9605>NP_005742 Length = 3907 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RVLLESEKV 9 +VLLESEKV Sbjct: 3299 QVLLESEKV 3307>NP_671714 Length = 3899 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RVLLESEKV 9 +VLLESEKV Sbjct: 3291 QVLLESEKV 3299>XP_006715890 Length = 3860 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RVLLESEKV 9 +VLLESEKV Sbjct: 3252 QVLLESEKV 3260>XP_005250160 Length = 3939 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RVLLESEKV 9 +VLLESEKV Sbjct: 3331 QVLLESEKV 3339>XP_005250159 Length = 3952 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RVLLESEKV 9 +VLLESEKV Sbjct: 3344 QVLLESEKV 3352>NP_940953 Length = 1907 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RVLLESEK 8 RV+LESE+ Sbjct: 1287 RVMLESER 1294>NP_005605 Length = 184 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 RVLLESEKV 9 R++LE+EK+ Sbjct: 162 RIILEAEKM 170>XP_006716144 Length = 173 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 RVLLESEKV 9 R++LE+EK+ Sbjct: 151 RIILEAEKM 159>XP_005273179 Length = 785 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RVLLESEK 8 RV+LESE+ Sbjct: 165 RVMLESER 172>XP_006711367 Length = 1872 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RVLLESEK 8 RV+LESE+ Sbjct: 1287 RVMLESER 1294>XP_005273178 Length = 1931 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RVLLESEK 8 RV+LESE+ Sbjct: 1287 RVMLESER 1294>XP_005244985 Length = 481 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VLLESEK 8 +LLESEK Sbjct: 438 ILLESEK 444>NP_001186456 Length = 1374 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 RVLLESEKV 9 RVL E EKV Sbjct: 1046 RVLCEIEKV 1054>NP_001186457 Length = 1246 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 RVLLESEKV 9 RVL E EKV Sbjct: 918 RVLCEIEKV 926>NP_001004416 Length = 1318 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 RVLLESEKV 9 RVL E EKV Sbjct: 990 RVLCEIEKV 998>NP_775839 Length = 1446 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 RVLLESEKV 9 RVL E EKV Sbjct: 1118 RVLCEIEKV 1126>NP_001275635 Length = 538 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLLESEKV 9 VLLE EK+ Sbjct: 455 VLLELEKI 462>NP_060502 Length = 325 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVLLESEKV 9 ++L+E EKV Sbjct: 154 KILMEVEKV 162>NP_958815 Length = 371 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVLLESEKV 9 ++L+E EKV Sbjct: 154 KILMEVEKV 162>NP_000868 Length = 569 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLLESEKV 9 VLLE EK+ Sbjct: 486 VLLELEKI 493>NP_065759 Length = 1116 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RVLLESEKV 9 R L+E+EKV Sbjct: 730 RRLMEAEKV 738>NP_001128243 Length = 1139 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RVLLESEKV 9 R L+E+EKV Sbjct: 753 RRLMEAEKV 761>NP_009106 Length = 339 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVLLESEKV 9 + L+E+EKV Sbjct: 213 KALIEAEKV 221>NP_001252 Length = 372 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RVLLESEK 8 +VL+E+EK Sbjct: 49 KVLMENEK 56>NP_001964 Length = 431 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLLESEKV 9 VLLE +KV Sbjct: 306 VLLEKDKV 313>NP_055524 Length = 3546 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RVLLESEK 8 R+LLES++ Sbjct: 2950 RILLESDE 2957>NP_005018 Length = 728 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVLLESEKV 9 R+LL SE++ Sbjct: 520 RILLNSERL 528>NP_065825 Length = 1006 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RVLLESEK 8 RVLLES + Sbjct: 134 RVLLESRR 141>XP_006720967 Length = 272 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVLLESEKV 9 ++L+E EKV Sbjct: 101 KILMEVEKV 109>XP_005255486 Length = 285 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVLLESEKV 9 ++L+E EKV Sbjct: 68 KILMEVEKV 76>XP_005255485 Length = 285 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVLLESEKV 9 ++L+E EKV Sbjct: 68 KILMEVEKV 76>XP_005255484 Length = 318 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVLLESEKV 9 ++L+E EKV Sbjct: 101 KILMEVEKV 109>XP_006720966 Length = 318 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVLLESEKV 9 ++L+E EKV Sbjct: 101 KILMEVEKV 109>XP_005255483 Length = 325 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVLLESEKV 9 ++L+E EKV Sbjct: 154 KILMEVEKV 162>XP_006716343 Length = 257 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVLLESEKV 9 + L+E+EKV Sbjct: 131 KALIEAEKV 139>XP_005273449 Length = 339 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVLLESEKV 9 + L+E+EKV Sbjct: 213 KALIEAEKV 221>XP_005273448 Length = 451 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVLLESEKV 9 + L+E+EKV Sbjct: 325 KALIEAEKV 333>XP_005263991 Length = 569 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLLESEKV 9 VLLE EK+ Sbjct: 486 VLLELEKI 493>XP_005263989 Length = 569 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLLESEKV 9 VLLE EK+ Sbjct: 486 VLLELEKI 493>XP_005263990 Length = 569 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLLESEKV 9 VLLE EK+ Sbjct: 486 VLLELEKI 493>XP_005263988 Length = 569 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLLESEKV 9 VLLE EK+ Sbjct: 486 VLLELEKI 493>XP_005263987 Length = 569 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLLESEKV 9 VLLE EK+ Sbjct: 486 VLLELEKI 493>XP_005263986 Length = 569 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLLESEKV 9 VLLE EK+ Sbjct: 486 VLLELEKI 493>XP_005245008 Length = 431 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLLESEKV 9 VLLE +KV Sbjct: 306 VLLEKDKV 313>XP_005245007 Length = 431 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLLESEKV 9 VLLE +KV Sbjct: 306 VLLEKDKV 313>NP_068567 Length = 405 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLLESEKV 9 VLLE +KV Sbjct: 306 VLLEKDKV 313Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.311 0.132 0.297 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 483,914 Number of extensions: 845 Number of successful extensions: 46 Number of sequences better than 10000.0: 46 Number of HSP's gapped: 46 Number of HSP's successfully gapped: 46 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |