Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_733751 20 299 XP_006716142 20 299 XP_005250088 20 299 XP_006716141 20 299 XP_005250085 20 299 XP_006716140 20 299 XP_005250084 20 299 XP_005250083 20 299 XP_005250082 20 299 NP_003473 17 4312 NP_001265660 17 4312 NP_001265661 17 4312 NP_036340 17 4312 XP_006719679 17 4312 XP_005269219 17 4312 XP_006719678 17 4312 XP_006719677 17 4312 XP_006714841 17 4312 XP_006714840 17 4312 NP_001161860 16 5631 NP_006070 16 5631 NP_001161861 16 5631 NP_062541 16 7355 NP_671494 16 7355 NP_006268 16 7355 NP_061923 16 7355 XP_006725609 16 7355 XP_005254564 16 7355 XP_005263135 16 7355 XP_005263134 16 7355 XP_006714303 16 7355 XP_005263133 16 7355 XP_005263131 16 7355 XP_005263130 16 7355 NP_000194 15 9605 NP_000030 15 9605 NP_689914 15 9605 NP_055654 15 9605 NP_001159724 15 9605 NP_689576 15 9605 NP_001265372 15 9605 NP_001073904 15 9605 NP_055838 15 9605 NP_001072990 15 9605 NP_001257943 15 9605 NP_000909 15 9605 NP_002430 15 9605 NP_001263181 15 9605 NP_001265374 15 9605 NP_004977 15 9605 XP_005272481 15 9605 XP_006720204 15 9605 XP_006720203 15 9605 XP_006720202 15 9605 XP_006720201 15 9605 XP_005271597 15 9605 XP_005271596 15 9605 XP_006713944 15 9605 NP_001072989 15 9605>NP_733751 Length = 4911 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RVKQIATLW 9 RVKQIA LW Sbjct: 1674 RVKQIAKLW 1682>XP_006716142 Length = 4927 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RVKQIATLW 9 RVKQIA LW Sbjct: 1691 RVKQIAKLW 1699>XP_005250088 Length = 4928 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RVKQIATLW 9 RVKQIA LW Sbjct: 1691 RVKQIAKLW 1699>XP_006716141 Length = 4959 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RVKQIATLW 9 RVKQIA LW Sbjct: 1691 RVKQIAKLW 1699>XP_005250085 Length = 4979 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RVKQIATLW 9 RVKQIA LW Sbjct: 1691 RVKQIAKLW 1699>XP_006716140 Length = 4982 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RVKQIATLW 9 RVKQIA LW Sbjct: 1691 RVKQIAKLW 1699>XP_005250084 Length = 4982 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RVKQIATLW 9 RVKQIA LW Sbjct: 1691 RVKQIAKLW 1699>XP_005250083 Length = 4982 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RVKQIATLW 9 RVKQIA LW Sbjct: 1690 RVKQIAKLW 1698>XP_005250082 Length = 4983 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RVKQIATLW 9 RVKQIA LW Sbjct: 1691 RVKQIAKLW 1699>NP_003473 Length = 5537 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RVKQIATLW 9 R KQI LW Sbjct: 2041 RCKQIMKLW 2049>NP_001265660 Length = 481 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RVKQIATLW 9 R+K IA LW Sbjct: 400 RLKLIAELW 408>NP_001265661 Length = 362 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RVKQIATLW 9 R+K IA LW Sbjct: 281 RLKLIAELW 289>NP_036340 Length = 506 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RVKQIATLW 9 R+K IA LW Sbjct: 425 RLKLIAELW 433>XP_006719679 Length = 5536 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RVKQIATLW 9 R KQI LW Sbjct: 2040 RCKQIMKLW 2048>XP_005269219 Length = 5537 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RVKQIATLW 9 R KQI LW Sbjct: 2041 RCKQIMKLW 2049>XP_006719678 Length = 5539 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RVKQIATLW 9 R KQI LW Sbjct: 2043 RCKQIMKLW 2051>XP_006719677 Length = 5540 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RVKQIATLW 9 R KQI LW Sbjct: 2044 RCKQIMKLW 2052>XP_006714841 Length = 481 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RVKQIATLW 9 R+K IA LW Sbjct: 400 RLKLIAELW 408>XP_006714840 Length = 514 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RVKQIATLW 9 R+K IA LW Sbjct: 433 RLKLIAELW 441>NP_001161860 Length = 270 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 RVKQIATLW 9 R+K++ LW Sbjct: 239 RIKELPELW 247>NP_006070 Length = 270 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 RVKQIATLW 9 R+K++ LW Sbjct: 239 RIKELPELW 247>NP_001161861 Length = 275 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 RVKQIATLW 9 R+K++ LW Sbjct: 244 RIKELPELW 252>NP_062541 Length = 1670 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 QIATLW 9 Q+AT+W Sbjct: 281 QLATIW 286>NP_671494 Length = 1249 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 QIATLW 9 Q+AT+W Sbjct: 281 QLATIW 286>NP_006268 Length = 1697 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 QIATLW 9 Q+AT+W Sbjct: 281 QLATIW 286>NP_061923 Length = 1073 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 VKQIATLW 9 VK+I T W Sbjct: 322 VKEIGTRW 329>XP_006725609 Length = 562 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 RVKQIATLW 9 RVKQ +W Sbjct: 511 RVKQSTKIW 519>XP_005254564 Length = 562 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 RVKQIATLW 9 RVKQ +W Sbjct: 511 RVKQSTKIW 519>XP_005263135 Length = 488 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 VKQIATLW 9 VK+I T W Sbjct: 322 VKEIGTRW 329>XP_005263134 Length = 800 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 VKQIATLW 9 VK+I T W Sbjct: 322 VKEIGTRW 329>XP_006714303 Length = 957 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 VKQIATLW 9 VK+I T W Sbjct: 206 VKEIGTRW 213>XP_005263133 Length = 1022 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 VKQIATLW 9 VK+I T W Sbjct: 322 VKEIGTRW 329>XP_005263131 Length = 1073 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 VKQIATLW 9 VK+I T W Sbjct: 322 VKEIGTRW 329>XP_005263130 Length = 1073 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 VKQIATLW 9 VK+I T W Sbjct: 322 VKEIGTRW 329>NP_000194 Length = 653 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 VKQIATLW 9 +KQ+ T W Sbjct: 85 IKQVRTHW 92>NP_000030 Length = 267 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVKQIATLW 9 RVK +AT++ Sbjct: 34 RVKDLATVY 42>NP_689914 Length = 5058 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VKQIATL 8 VK+IATL Sbjct: 2570 VKEIATL 2576>NP_055654 Length = 763 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 RVKQIATLW 9 R KQ+ T W Sbjct: 443 RSKQLLTQW 451>NP_001159724 Length = 705 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 RVKQIATLW 9 R KQ+ T W Sbjct: 385 RSKQLLTQW 393>NP_689576 Length = 669 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 RVKQIATLW 9 +V+QI +W Sbjct: 573 KVRQILDIW 581>NP_001265372 Length = 632 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 RVKQIATLW 9 +V+QI +W Sbjct: 536 KVRQILDIW 544>NP_001073904 Length = 809 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 KQIATLW 9 +Q+A LW Sbjct: 92 RQLAALW 98>NP_055838 Length = 676 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RVKQIAT 7 RVK+IAT Sbjct: 136 RVKRIAT 142>NP_001072990 Length = 1306 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RVKQIATLW 9 R K+I+ LW Sbjct: 981 REKEISGLW 989>NP_001257943 Length = 1329 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RVKQIATLW 9 R K+I+ LW Sbjct: 1004 REKEISGLW 1012>NP_000909 Length = 508 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 KQIATLW 9 KQ+A +W Sbjct: 401 KQLAPIW 407>NP_002430 Length = 1137 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 RVKQIATLW 9 R+K A LW Sbjct: 1103 RLKYFAKLW 1111>NP_001263181 Length = 677 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RVKQIAT 7 RVK+IAT Sbjct: 136 RVKRIAT 142>NP_001265374 Length = 611 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 RVKQIATLW 9 +V+QI +W Sbjct: 515 KVRQILDIW 523>NP_004977 Length = 1300 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RVKQIATLW 9 R K+I+ LW Sbjct: 1004 REKEISGLW 1012>XP_005272481 Length = 507 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 KQIATLW 9 +Q+A LW Sbjct: 92 RQLAALW 98>XP_006720204 Length = 1298 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RVKQIATLW 9 R K+I+ LW Sbjct: 1004 REKEISGLW 1012>XP_006720203 Length = 1328 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RVKQIATLW 9 R K+I+ LW Sbjct: 1004 REKEISGLW 1012>XP_006720202 Length = 1329 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RVKQIATLW 9 R K+I+ LW Sbjct: 1004 REKEISGLW 1012>XP_006720201 Length = 1357 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RVKQIATLW 9 R K+I+ LW Sbjct: 1004 REKEISGLW 1012>XP_005271597 Length = 267 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVKQIATLW 9 RVK +AT++ Sbjct: 34 RVKDLATVY 42>XP_005271596 Length = 267 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVKQIATLW 9 RVK +AT++ Sbjct: 34 RVKDLATVY 42>XP_006713944 Length = 722 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 VKQIATLW 9 +KQ+ T W Sbjct: 85 IKQVRTHW 92>NP_001072989 Length = 1357 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RVKQIATLW 9 R K+I+ LW Sbjct: 1004 REKEISGLW 1012Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.330 0.131 0.459 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 388,475 Number of extensions: 618 Number of successful extensions: 59 Number of sequences better than 10000.0: 59 Number of HSP's gapped: 59 Number of HSP's successfully gapped: 59 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |