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Blast-Search of mutated query peptide against human proteome

BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_004251                                                              19     665
NP_009152                                                              17    4312
NP_001186582                                                           17    4312
NP_001186583                                                           17    4312
NP_001186591                                                           17    4312
NP_001186592                                                           17    4312
NP_001186590                                                           17    4312
NP_001186593                                                           17    4312
NP_001360                                                              15    9605
NP_001124468                                                           15    9605
NP_000850                                                              15    9605
NP_004148                                                              15    9605
NP_663788                                                              15    9605
NP_001106984                                                           15    9605
NP_001106983                                                           15    9605
NP_067026                                                              15    9605
XP_006720023                                                           15    9605
XP_005254148                                                           15    9605
XP_005254146                                                           15    9605
XP_006720020                                                           15    9605
XP_005254144                                                           15    9605
XP_006720019                                                           15    9605
XP_005254143                                                           15    9605
XP_005254142                                                           15    9605
XP_005248319                                                           15    9605
XP_005265372                                                           15    9605
XP_005265371                                                           15    9605
XP_005265370                                                           15    9605

>NP_004251
          Length = 1208

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 2   VKLVDSMG 9
           VKLVDSMG
Sbjct: 990 VKLVDSMG 997



>NP_009152
          Length = 205

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1  RVKLVDSM 8
          RVKL+D+M
Sbjct: 34 RVKLLDTM 41



>NP_001186582
          Length = 180

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1  RVKLVDSM 8
          RVKL+D+M
Sbjct: 34 RVKLLDTM 41



>NP_001186583
          Length = 207

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1  RVKLVDSM 8
          RVKL+D+M
Sbjct: 34 RVKLLDTM 41



>NP_001186591
          Length = 211

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1  RVKLVDSM 8
          RVKL+D+M
Sbjct: 34 RVKLLDTM 41



>NP_001186592
          Length = 175

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1  RVKLVDSM 8
          RVKL+D+M
Sbjct: 34 RVKLLDTM 41



>NP_001186590
          Length = 220

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1  RVKLVDSM 8
          RVKL+D+M
Sbjct: 34 RVKLLDTM 41



>NP_001186593
          Length = 142

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1  RVKLVDSM 8
          RVKL+D+M
Sbjct: 34 RVKLLDTM 41



>NP_001360
          Length = 4624

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1    RVKLVDSMG 9
            R  +VDSMG
Sbjct: 4013 RKYIVDSMG 4021



>NP_001124468
          Length = 835

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   RVKLVDSMG 9
           RVK++ S+G
Sbjct: 255 RVKMIMSLG 263



>NP_000850
          Length = 888

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   RVKLVDSMG 9
           RVK++ S+G
Sbjct: 255 RVKMIMSLG 263



>NP_004148
          Length = 404

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   RVKLVDSMG 9
           R+K+VD +G
Sbjct: 270 RMKIVDVIG 278



>NP_663788
          Length = 782

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   RVKLVDSMG 9
           R+K  DS+G
Sbjct: 129 RIKSFDSLG 137



>NP_001106984
          Length = 753

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   RVKLVDSMG 9
           R+K  DS+G
Sbjct: 100 RIKSFDSLG 108



>NP_001106983
          Length = 803

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   RVKLVDSMG 9
           R+K  DS+G
Sbjct: 150 RIKSFDSLG 158



>NP_067026
          Length = 271

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   LVDSMG 9
           L+DSMG
Sbjct: 163 LIDSMG 168



>XP_006720023
          Length = 679

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   RVKLVDSMG 9
           R+K  DS+G
Sbjct: 129 RIKSFDSLG 137



>XP_005254148
          Length = 721

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1  RVKLVDSMG 9
          R+K  DS+G
Sbjct: 47 RIKSFDSLG 55



>XP_005254146
          Length = 792

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1  RVKLVDSMG 9
          R+K  DS+G
Sbjct: 47 RIKSFDSLG 55



>XP_006720020
          Length = 798

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1  RVKLVDSMG 9
          R+K  DS+G
Sbjct: 53 RIKSFDSLG 61



>XP_005254144
          Length = 803

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   RVKLVDSMG 9
           R+K  DS+G
Sbjct: 129 RIKSFDSLG 137



>XP_006720019
          Length = 815

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   RVKLVDSMG 9
           R+K  DS+G
Sbjct: 129 RIKSFDSLG 137



>XP_005254143
          Length = 862

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   RVKLVDSMG 9
           R+K  DS+G
Sbjct: 129 RIKSFDSLG 137



>XP_005254142
          Length = 874

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   RVKLVDSMG 9
           R+K  DS+G
Sbjct: 129 RIKSFDSLG 137



>XP_005248319
          Length = 4609

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1    RVKLVDSMG 9
            R  +VDSMG
Sbjct: 3998 RKYIVDSMG 4006



>XP_005265372
          Length = 330

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   RVKLVDSMG 9
           R+K+VD +G
Sbjct: 270 RMKIVDVIG 278



>XP_005265371
          Length = 382

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   RVKLVDSMG 9
           R+K+VD +G
Sbjct: 270 RMKIVDVIG 278



>XP_005265370
          Length = 404

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   RVKLVDSMG 9
           R+K+VD +G
Sbjct: 270 RMKIVDVIG 278



  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.323    0.139    0.363 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 397,194
Number of extensions: 596
Number of successful extensions: 28
Number of sequences better than 10000.0: 28
Number of HSP's gapped: 28
Number of HSP's successfully gapped: 28
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.9 bits)
S2: 28 (15.4 bits)