Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001078518 18 1135 NP_036351 18 1135 NP_789765 18 1135 NP_001123914 18 1135 NP_005334 18 1135 NP_004976 18 1135 NP_203524 18 1135 NP_001239019 18 1135 NP_002515 18 1135 NP_853510 18 1135 NP_036382 18 1135 NP_006261 18 1135 XP_006725199 18 1135 XP_006719132 18 1135 XP_006718280 18 1135 XP_005247286 18 1135 XP_005247285 18 1135 NP_002877 18 1482 NP_001238851 18 1482 NP_056461 18 1482 NP_001238850 18 1482 NP_001010942 18 1482 NP_067006 18 1482 NP_001258115 18 1482 XP_006710866 18 1482 NP_066361 18 1482 NP_001010935 18 1482 NP_002875 18 1482 NP_005393 18 1935 NP_002872 18 1935 XP_006715826 18 1935 XP_006715825 18 1935 XP_005263786 18 1935 XP_005263785 18 1935 XP_005263784 18 1935 XP_005263781 18 1935 NP_005605 17 2528 NP_996563 17 3301 NP_001273130 17 4312 NP_001243750 17 4312 NP_008843 17 4312 NP_001259006 17 4312 NP_002921 17 4312 NP_057647 17 4312 XP_005254491 17 4312 NP_116307 16 5631 XP_006716144 16 5631 NP_997464 16 7355 NP_001244067 15 9605 NP_113671 15 9605 NP_001244066 15 9605 XP_005260627 15 9605 XP_006723945 15 9605 XP_006723944 15 9605>NP_001078518 Length = 208 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VGKSALTI 9 VGKSALTI Sbjct: 24 VGKSALTI 31>NP_036351 Length = 208 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VGKSALTI 9 VGKSALTI Sbjct: 24 VGKSALTI 31>NP_789765 Length = 170 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VGKSALTI 9 VGKSALTI Sbjct: 14 VGKSALTI 21>NP_001123914 Length = 189 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VGKSALTI 9 VGKSALTI Sbjct: 14 VGKSALTI 21>NP_005334 Length = 189 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VGKSALTI 9 VGKSALTI Sbjct: 14 VGKSALTI 21>NP_004976 Length = 188 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VGKSALTI 9 VGKSALTI Sbjct: 14 VGKSALTI 21>NP_203524 Length = 189 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VGKSALTI 9 VGKSALTI Sbjct: 14 VGKSALTI 21>NP_001239019 Length = 208 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VGKSALTI 9 VGKSALTI Sbjct: 24 VGKSALTI 31>NP_002515 Length = 189 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VGKSALTI 9 VGKSALTI Sbjct: 14 VGKSALTI 21>NP_853510 Length = 233 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VGKSALTI 9 VGKSALTI Sbjct: 52 VGKSALTI 59>NP_036382 Length = 204 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VGKSALTI 9 VGKSALTI Sbjct: 25 VGKSALTI 32>NP_006261 Length = 218 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VGKSALTI 9 VGKSALTI Sbjct: 40 VGKSALTI 47>XP_006725199 Length = 170 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VGKSALTI 9 VGKSALTI Sbjct: 14 VGKSALTI 21>XP_006719132 Length = 189 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VGKSALTI 9 VGKSALTI Sbjct: 14 VGKSALTI 21>XP_006718280 Length = 170 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VGKSALTI 9 VGKSALTI Sbjct: 14 VGKSALTI 21>XP_005247286 Length = 170 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VGKSALTI 9 VGKSALTI Sbjct: 24 VGKSALTI 31>XP_005247285 Length = 208 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VGKSALTI 9 VGKSALTI Sbjct: 24 VGKSALTI 31>NP_002877 Length = 183 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 VGKSALTI 9 VGKSALT+ Sbjct: 14 VGKSALTV 21>NP_001238851 Length = 137 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 VGKSALTI 9 VGKSALT+ Sbjct: 14 VGKSALTV 21>NP_056461 Length = 184 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 VGKSALTI 9 VGKSALT+ Sbjct: 14 VGKSALTV 21>NP_001238850 Length = 165 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 VGKSALTI 9 VGKSALT+ Sbjct: 14 VGKSALTV 21>NP_001010942 Length = 184 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 VGKSALTI 9 VGKSALT+ Sbjct: 14 VGKSALTV 21>NP_067006 Length = 183 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 VGKSALTI 9 VGKSALT+ Sbjct: 14 VGKSALTV 21>NP_001258115 Length = 183 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 VGKSALTI 9 VGKSALT+ Sbjct: 14 VGKSALTV 21>XP_006710866 Length = 184 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 VGKSALTI 9 VGKSALT+ Sbjct: 14 VGKSALTV 21>NP_066361 Length = 183 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 VGKSALTI 9 VGKSALT+ Sbjct: 14 VGKSALTV 21>NP_001010935 Length = 184 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 VGKSALTI 9 VGKSALT+ Sbjct: 14 VGKSALTV 21>NP_002875 Length = 184 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 VGKSALTI 9 VGKSALT+ Sbjct: 14 VGKSALTV 21>NP_005393 Length = 206 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 VGKSALTI 9 VGKSALT+ Sbjct: 25 VGKSALTL 32>NP_002872 Length = 206 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 VGKSALTI 9 VGKSALT+ Sbjct: 25 VGKSALTL 32>XP_006715826 Length = 206 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 VGKSALTI 9 VGKSALT+ Sbjct: 25 VGKSALTL 32>XP_006715825 Length = 206 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 VGKSALTI 9 VGKSALT+ Sbjct: 25 VGKSALTL 32>XP_005263786 Length = 206 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 VGKSALTI 9 VGKSALT+ Sbjct: 25 VGKSALTL 32>XP_005263785 Length = 206 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 VGKSALTI 9 VGKSALT+ Sbjct: 25 VGKSALTL 32>XP_005263784 Length = 206 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 VGKSALTI 9 VGKSALT+ Sbjct: 25 VGKSALTL 32>XP_005263781 Length = 228 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 VGKSALTI 9 VGKSALT+ Sbjct: 47 VGKSALTL 54>NP_005605 Length = 184 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 VGKSALTI 9 VGKS+LTI Sbjct: 17 VGKSSLTI 24>NP_996563 Length = 242 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RVGKSALTI 9 RVGKSA+ + Sbjct: 37 RVGKSAMIV 45>NP_001273130 Length = 204 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 GKSALTI 9 GKSALT+ Sbjct: 15 GKSALTV 21>NP_001243750 Length = 236 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VGKSALTI 9 VGKSA+T+ Sbjct: 49 VGKSAMTM 56>NP_008843 Length = 219 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VGKSALTI 9 VGKSA+T+ Sbjct: 32 VGKSAMTM 39>NP_001259006 Length = 153 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VGKSALTI 9 VGKSA+T+ Sbjct: 31 VGKSAMTM 38>NP_002921 Length = 217 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VGKSALTI 9 VGKSA+T+ Sbjct: 31 VGKSAMTM 38>NP_057647 Length = 266 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 GKSALTI 9 GKSALT+ Sbjct: 32 GKSALTV 38>XP_005254491 Length = 151 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 GKSALTI 9 GKSALT+ Sbjct: 32 GKSALTV 38>NP_116307 Length = 199 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VGKSALTI 9 VGKSAL + Sbjct: 17 VGKSALVV 24>XP_006716144 Length = 173 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VGKSALTI 9 +GKS+LTI Sbjct: 6 LGKSSLTI 13>NP_997464 Length = 320 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RVGKSALT 8 R+G SALT Sbjct: 236 RLGSSALT 243>NP_001244067 Length = 752 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RVGKSAL 7 R GKSAL Sbjct: 359 RTGKSAL 365>NP_113671 Length = 862 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RVGKSAL 7 R GKSAL Sbjct: 469 RTGKSAL 475>NP_001244066 Length = 903 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RVGKSAL 7 R GKSAL Sbjct: 510 RTGKSAL 516>XP_005260627 Length = 692 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RVGKSAL 7 R GKSAL Sbjct: 299 RTGKSAL 305>XP_006723945 Length = 752 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RVGKSAL 7 R GKSAL Sbjct: 359 RTGKSAL 365>XP_006723944 Length = 862 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RVGKSAL 7 R GKSAL Sbjct: 469 RTGKSAL 475Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.319 0.132 0.330 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 399,620 Number of extensions: 542 Number of successful extensions: 54 Number of sequences better than 10000.0: 54 Number of HSP's gapped: 54 Number of HSP's successfully gapped: 54 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |