Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004351 20 299 NP_005036 18 1935 NP_774959 18 1935 NP_001180197 17 4312 NP_036287 17 4312 NP_001180198 17 4312 NP_001257661 17 4312 XP_006723189 17 4312 XP_006723188 17 4312 NP_001194005 16 5631 NP_543024 16 5631 XP_006723777 16 5631 XP_005260352 16 5631 NP_001157790 16 7355 NP_001157791 16 7355 NP_001157789 16 7355 NP_001448 16 7355 NP_001240841 16 7355 NP_055988 16 7355 NP_036307 16 7355 NP_208385 16 7355 NP_932348 16 7355 NP_055905 16 7355 NP_001153804 16 7355 NP_001005388 16 7355 NP_006397 16 7355 NP_001153803 16 7355 XP_005274495 16 7355 XP_005256402 16 7355 XP_006722342 16 7355 XP_005252908 16 7355 XP_006714063 16 7355 XP_005262705 16 7355 XP_006714062 16 7355 XP_005262704 16 7355 XP_005262703 16 7355 XP_006713130 16 7355 XP_005265039 16 7355 XP_005265038 16 7355 XP_005265035 16 7355 XP_005265034 16 7355 XP_006711299 16 7355 XP_005245053 16 7355 XP_006711298 16 7355 XP_005245050 16 7355 XP_005245049 16 7355 XP_005245048 16 7355 XP_005245046 16 7355 XP_005245043 16 7355 XP_006711297 16 7355 XP_006711296 16 7355 XP_006711295 16 7355 XP_006711294 16 7355 XP_006711293 16 7355 XP_005245042 16 7355 XP_006711292 16 7355 XP_006711291 16 7355 XP_006711290 16 7355 XP_006711289 16 7355 XP_005245034 16 7355 NP_065095 15 9605 NP_689580 15 9605 NP_001244074 15 9605 NP_054722 15 9605 NP_085911 15 9605 NP_004390 15 9605 XP_005256326 15 9605 XP_005253390 15 9605 XP_006719114 15 9605 XP_006719113 15 9605 XP_005246000 15 9605 XP_006710404 15 9605>NP_004351 Length = 882 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RVEVSKDFG 9 RVEVS+DFG Sbjct: 492 RVEVSEDFG 500>NP_005036 Length = 3460 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RVEVSKDFG 9 R+E S+DFG Sbjct: 2040 RLEFSRDFG 2048>NP_774959 Length = 3458 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RVEVSKDFG 9 R+E S+DFG Sbjct: 2040 RLEFSRDFG 2048>NP_001180197 Length = 850 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VEVSKDFG 9 VEV +DFG Sbjct: 532 VEVPEDFG 539>NP_036287 Length = 649 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VEVSKDFG 9 VEV +DFG Sbjct: 331 VEVPEDFG 338>NP_001180198 Length = 796 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VEVSKDFG 9 VEV +DFG Sbjct: 478 VEVPEDFG 485>NP_001257661 Length = 128 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EVSKDFG 9 E+S+DFG Sbjct: 73 EISEDFG 79>XP_006723189 Length = 795 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VEVSKDFG 9 VEV +DFG Sbjct: 477 VEVPEDFG 484>XP_006723188 Length = 849 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VEVSKDFG 9 VEV +DFG Sbjct: 531 VEVPEDFG 538>NP_001194005 Length = 423 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VSKDFG 9 +SKDFG Sbjct: 270 ISKDFG 275>NP_543024 Length = 572 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VSKDFG 9 +SKDFG Sbjct: 270 ISKDFG 275>XP_006723777 Length = 469 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VSKDFG 9 +SKDFG Sbjct: 163 ISKDFG 168>XP_005260352 Length = 576 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VSKDFG 9 +SKDFG Sbjct: 270 ISKDFG 275>NP_001157790 Length = 2591 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RVEVSKD 7 RVEV KD Sbjct: 955 RVEVGKD 961>NP_001157791 Length = 2578 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RVEVSKD 7 RVEV KD Sbjct: 955 RVEVGKD 961>NP_001157789 Length = 2633 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RVEVSKD 7 RVEV KD Sbjct: 955 RVEVGKD 961>NP_001448 Length = 2602 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RVEVSKD 7 RVEV KD Sbjct: 955 RVEVGKD 961>NP_001240841 Length = 1159 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 EVSKDFG 9 EVS DFG Sbjct: 16 EVSVDFG 22>NP_055988 Length = 1168 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 EVSKDFG 9 EVS DFG Sbjct: 16 EVSVDFG 22>NP_036307 Length = 471 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RVEVSKD 7 R+E+SKD Sbjct: 311 RIEMSKD 317>NP_208385 Length = 415 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RVEVSKD 7 R+E+SKD Sbjct: 311 RIEMSKD 317>NP_932348 Length = 915 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 EVSKDF 8 E+SKDF Sbjct: 511 EISKDF 516>NP_055905 Length = 1169 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 RVEVSKDFG 9 RV+ DFG Sbjct: 796 RVQAENDFG 804>NP_001153804 Length = 1174 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 RVEVSKDFG 9 RV+ DFG Sbjct: 796 RVQAENDFG 804>NP_001005388 Length = 1240 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 RVEVSKDFG 9 RV+ DFG Sbjct: 800 RVQAENDFG 808>NP_006397 Length = 271 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 EVSKDFG 9 ++SKD+G Sbjct: 183 QISKDYG 189>NP_001153803 Length = 1189 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 RVEVSKDFG 9 RV+ DFG Sbjct: 811 RVQAENDFG 819>XP_005274495 Length = 257 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 EVSKDFG 9 ++SKD+G Sbjct: 169 QISKDYG 175>XP_005256402 Length = 751 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 EVSKDF 8 E+SKDF Sbjct: 511 EISKDF 516>XP_006722342 Length = 762 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 EVSKDF 8 E+SKDF Sbjct: 522 EISKDF 527>XP_005252908 Length = 466 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RVEVSKD 7 R+E+SKD Sbjct: 306 RIEMSKD 312>XP_006714063 Length = 1168 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 EVSKDFG 9 EVS DFG Sbjct: 16 EVSVDFG 22>XP_005262705 Length = 1181 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 EVSKDFG 9 EVS DFG Sbjct: 16 EVSVDFG 22>XP_006714062 Length = 1262 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 EVSKDFG 9 EVS DFG Sbjct: 16 EVSVDFG 22>XP_005262704 Length = 1262 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 EVSKDFG 9 EVS DFG Sbjct: 16 EVSVDFG 22>XP_005262703 Length = 1275 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 EVSKDFG 9 EVS DFG Sbjct: 16 EVSVDFG 22>XP_006713130 Length = 2109 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RVEVSKD 7 RVEV KD Sbjct: 955 RVEVGKD 961>XP_005265039 Length = 2177 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RVEVSKD 7 RVEV KD Sbjct: 955 RVEVGKD 961>XP_005265038 Length = 2181 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RVEVSKD 7 RVEV KD Sbjct: 955 RVEVGKD 961>XP_005265035 Length = 2609 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RVEVSKD 7 RVEV KD Sbjct: 955 RVEVGKD 961>XP_005265034 Length = 2622 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RVEVSKD 7 RVEV KD Sbjct: 955 RVEVGKD 961>XP_006711299 Length = 1042 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 RVEVSKDFG 9 RV+ DFG Sbjct: 966 RVQAENDFG 974>XP_005245053 Length = 1232 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 RVEVSKDFG 9 RV+ DFG Sbjct: 966 RVQAENDFG 974>XP_006711298 Length = 1299 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 RVEVSKDFG 9 RV+ DFG Sbjct: 934 RVQAENDFG 942>XP_005245050 Length = 1306 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 RVEVSKDFG 9 RV+ DFG Sbjct: 928 RVQAENDFG 936>XP_005245049 Length = 1318 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 RVEVSKDFG 9 RV+ DFG Sbjct: 945 RVQAENDFG 953>XP_005245048 Length = 1323 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 RVEVSKDFG 9 RV+ DFG Sbjct: 945 RVQAENDFG 953>XP_005245046 Length = 1338 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 RVEVSKDFG 9 RV+ DFG Sbjct: 960 RVQAENDFG 968>XP_005245043 Length = 1389 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 RVEVSKDFG 9 RV+ DFG Sbjct: 949 RVQAENDFG 957>XP_006711297 Length = 1391 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 RVEVSKDFG 9 RV+ DFG Sbjct: 934 RVQAENDFG 942>XP_006711296 Length = 1391 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 RVEVSKDFG 9 RV+ DFG Sbjct: 844 RVQAENDFG 852>XP_006711295 Length = 1400 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 RVEVSKDFG 9 RV+ DFG Sbjct: 853 RVQAENDFG 861>XP_006711294 Length = 1400 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 RVEVSKDFG 9 RV+ DFG Sbjct: 960 RVQAENDFG 968>XP_006711293 Length = 1402 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 RVEVSKDFG 9 RV+ DFG Sbjct: 934 RVQAENDFG 942>XP_005245042 Length = 1406 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 RVEVSKDFG 9 RV+ DFG Sbjct: 966 RVQAENDFG 974>XP_006711292 Length = 1428 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 RVEVSKDFG 9 RV+ DFG Sbjct: 881 RVQAENDFG 889>XP_006711291 Length = 1430 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 RVEVSKDFG 9 RV+ DFG Sbjct: 934 RVQAENDFG 942>XP_006711290 Length = 1434 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 RVEVSKDFG 9 RV+ DFG Sbjct: 887 RVQAENDFG 895>XP_006711289 Length = 1475 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 RVEVSKDFG 9 RV+ DFG Sbjct: 928 RVQAENDFG 936>XP_005245034 Length = 1481 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 RVEVSKDFG 9 RV+ DFG Sbjct: 934 RVQAENDFG 942>NP_065095 Length = 211 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 VEVSKDFG 9 + +SK+FG Sbjct: 154 IHISKNFG 161>NP_689580 Length = 362 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RVEVSKDFG 9 RVE K FG Sbjct: 215 RVECIKSFG 223>NP_001244074 Length = 880 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RVEVSKDFG 9 RVEV FG Sbjct: 855 RVEVKATFG 863>NP_054722 Length = 1227 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RVEVSKDF 8 R+EV +DF Sbjct: 390 RLEVDEDF 397>NP_085911 Length = 906 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RVEVSKDFG 9 RVEV FG Sbjct: 881 RVEVKATFG 889>NP_004390 Length = 856 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RVEVSKDFG 9 RVEV FG Sbjct: 831 RVEVKATFG 839>XP_005256326 Length = 1192 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RVEVSKDF 8 R+EV +DF Sbjct: 355 RLEVDEDF 362>XP_005253390 Length = 942 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RVEVSKDFG 9 RVEV FG Sbjct: 917 RVEVKATFG 925>XP_006719114 Length = 954 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RVEVSKDFG 9 RVEV FG Sbjct: 904 RVEVKATFG 912>XP_006719113 Length = 967 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RVEVSKDFG 9 RVEV FG Sbjct: 917 RVEVKATFG 925>XP_005246000 Length = 189 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 VEVSKDFG 9 + +SK+FG Sbjct: 154 IHISKNFG 161>XP_006710404 Length = 243 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RVEVSKDFG 9 RVE K FG Sbjct: 96 RVECIKSFG 104Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.318 0.140 0.380 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 507,420 Number of extensions: 810 Number of successful extensions: 72 Number of sequences better than 10000.0: 72 Number of HSP's gapped: 72 Number of HSP's successfully gapped: 72 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |