Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001155973 19 665 NP_001020014 19 665 NP_055903 19 665 NP_001136025 17 4312 NP_001136024 17 4312 NP_060620 17 4312 XP_005271054 17 4312 XP_005271053 17 4312 XP_005271051 17 4312 XP_005271050 17 4312 XP_005271049 17 4312 NP_001171661 16 5631 NP_004245 16 5631 NP_001171665 16 5631 NP_001171662 16 5631 NP_444256 16 7355 NP_444254 16 7355 NP_444253 16 7355 NP_444255 16 7355 NP_001092007 16 7355 NP_689499 16 7355 NP_001243197 16 7355 NP_001243196 16 7355 NP_006693 16 7355 NP_001159583 16 7355 NP_001159585 16 7355 NP_002042 16 7355 NP_001159586 16 7355 NP_115967 16 7355 NP_001002295 16 7355 NP_001159584 16 7355 NP_055707 16 7355 NP_001273128 16 7355 NP_004035 16 7355 NP_061928 16 7355 NP_001092909 16 7355 NP_443124 16 7355 NP_006460 16 7355 NP_115544 16 7355 NP_001273123 16 7355 NP_001273118 16 7355 NP_001273117 16 7355 XP_006718924 16 7355 XP_006718107 16 7355 XP_006718106 16 7355 XP_005252500 16 7355 XP_005252499 16 7355 XP_005266139 16 7355 XP_005266136 16 7355 XP_006717167 16 7355 XP_006717166 16 7355 XP_006717165 16 7355 XP_005247551 16 7355 XP_005247550 16 7355 XP_006713712 16 7355 XP_005247549 16 7355 XP_006712608 16 7355 XP_005244900 16 7355 NP_003202 16 7355 NP_006840 16 7355 NP_001070248 16 7355 NP_001191335 15 9605 NP_001263256 15 9605 NP_001263255 15 9605 NP_700357 15 9605 NP_653186 15 9605 NP_001157413 15 9605 NP_001264044 15 9605 XP_006718494 15 9605 XP_005273799 15 9605 XP_006718493 15 9605 XP_005250558 15 9605 XP_006715785 15 9605>NP_001155973 Length = 1833 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RVAVLNGQP 9 RVAV NGQP Sbjct: 72 RVAVPNGQP 80>NP_001020014 Length = 1029 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RVAVLNGQP 9 RVAV NGQP Sbjct: 108 RVAVPNGQP 116>NP_055903 Length = 1723 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RVAVLNGQP 9 RVAV NGQP Sbjct: 72 RVAVPNGQP 80>NP_001136025 Length = 709 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 RVAVLNGQP 9 RVA LN QP Sbjct: 528 RVADLNDQP 536>NP_001136024 Length = 1369 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 RVAVLNGQP 9 RVA LN QP Sbjct: 528 RVADLNDQP 536>NP_060620 Length = 566 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 RVAVLNGQP 9 R AVLNG P Sbjct: 432 RGAVLNGGP 440>XP_005271054 Length = 282 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 RVAVLNGQP 9 R AVLNG P Sbjct: 148 RGAVLNGGP 156>XP_005271053 Length = 308 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 RVAVLNGQP 9 R AVLNG P Sbjct: 174 RGAVLNGGP 182>XP_005271051 Length = 566 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 RVAVLNGQP 9 R AVLNG P Sbjct: 432 RGAVLNGGP 440>XP_005271050 Length = 592 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 RVAVLNGQP 9 R AVLNG P Sbjct: 458 RGAVLNGGP 466>XP_005271049 Length = 592 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 RVAVLNGQP 9 R AVLNG P Sbjct: 458 RGAVLNGGP 466>NP_001171661 Length = 542 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RVAVLNGQ 8 RVAV NG+ Sbjct: 278 RVAVFNGK 285>NP_004245 Length = 542 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RVAVLNGQ 8 RVAV NG+ Sbjct: 278 RVAVFNGK 285>NP_001171665 Length = 419 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RVAVLNGQ 8 RVAV NG+ Sbjct: 155 RVAVFNGK 162>NP_001171662 Length = 451 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RVAVLNGQ 8 RVAV NG+ Sbjct: 187 RVAVFNGK 194>NP_444256 Length = 1794 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VLNGQP 9 +LNGQP Sbjct: 479 LLNGQP 484>NP_444254 Length = 1845 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VLNGQP 9 +LNGQP Sbjct: 479 LLNGQP 484>NP_444253 Length = 1914 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VLNGQP 9 +LNGQP Sbjct: 548 LLNGQP 553>NP_444255 Length = 1863 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VLNGQP 9 +LNGQP Sbjct: 548 LLNGQP 553>NP_001092007 Length = 1342 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVAVLNGQP 9 ++AVL G+P Sbjct: 555 QLAVLTGEP 563>NP_689499 Length = 1317 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVAVLNGQP 9 ++AVL G+P Sbjct: 530 QLAVLTGEP 538>NP_001243197 Length = 1026 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VLNGQP 9 +LNGQP Sbjct: 813 LLNGQP 818>NP_001243196 Length = 1320 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VLNGQP 9 +LNGQP Sbjct: 1107 LLNGQP 1112>NP_006693 Length = 1327 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVAVLNGQP 9 ++AVL G+P Sbjct: 535 QLAVLTGEP 543>NP_001159583 Length = 1375 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVAVLNGQP 9 ++AVL G+P Sbjct: 583 QLAVLTGEP 591>NP_001159585 Length = 1327 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVAVLNGQP 9 ++AVL G+P Sbjct: 535 QLAVLTGEP 543>NP_002042 Length = 443 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 AVLNGQ 8 AVLNGQ Sbjct: 17 AVLNGQ 22>NP_001159586 Length = 1365 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVAVLNGQP 9 ++AVL G+P Sbjct: 574 QLAVLTGEP 582>NP_115967 Length = 1320 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VLNGQP 9 +LNGQP Sbjct: 1107 LLNGQP 1112>NP_001002295 Length = 444 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 AVLNGQ 8 AVLNGQ Sbjct: 17 AVLNGQ 22>NP_001159584 Length = 1300 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVAVLNGQP 9 ++AVL G+P Sbjct: 509 QLAVLTGEP 517>NP_055707 Length = 1271 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 AVLNGQP 9 A+L GQP Sbjct: 797 AILGGQP 803>NP_001273128 Length = 1271 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 AVLNGQP 9 A+L GQP Sbjct: 797 AILGGQP 803>NP_004035 Length = 592 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 VAVLNGQP 9 + VLNG P Sbjct: 228 ITVLNGAP 235>NP_061928 Length = 1007 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VLNGQP 9 +LNGQP Sbjct: 66 LLNGQP 71>NP_001092909 Length = 1008 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RVAVLNG 7 RVA LNG Sbjct: 424 RVAALNG 430>NP_443124 Length = 2459 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RVAVLNGQ 8 R+AVL GQ Sbjct: 636 RLAVLRGQ 643>NP_006460 Length = 642 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VAVLNGQ 8 VAVLNG+ Sbjct: 554 VAVLNGK 560>NP_115544 Length = 830 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RVAVLNGQP 9 + VLNG+P Sbjct: 347 KALVLNGKP 355>NP_001273123 Length = 1316 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 AVLNGQP 9 A+L GQP Sbjct: 842 AILGGQP 848>NP_001273118 Length = 1337 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 AVLNGQP 9 A+L GQP Sbjct: 863 AILGGQP 869>NP_001273117 Length = 1349 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 AVLNGQP 9 A+L GQP Sbjct: 875 AILGGQP 881>XP_006718924 Length = 969 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VLNGQP 9 +LNGQP Sbjct: 66 LLNGQP 71>XP_006718107 Length = 1330 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VLNGQP 9 +LNGQP Sbjct: 1117 LLNGQP 1122>XP_006718106 Length = 1338 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VLNGQP 9 +LNGQP Sbjct: 1125 LLNGQP 1130>XP_005252500 Length = 444 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 AVLNGQ 8 AVLNGQ Sbjct: 17 AVLNGQ 22>XP_005252499 Length = 444 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 AVLNGQ 8 AVLNGQ Sbjct: 17 AVLNGQ 22>XP_005266139 Length = 741 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVAVLNGQP 9 ++AVL G+P Sbjct: 556 QLAVLTGEP 564>XP_005266136 Length = 953 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVAVLNGQP 9 ++AVL G+P Sbjct: 556 QLAVLTGEP 564>XP_006717167 Length = 1309 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVAVLNGQP 9 ++AVL G+P Sbjct: 522 QLAVLTGEP 530>XP_006717166 Length = 1316 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVAVLNGQP 9 ++AVL G+P Sbjct: 529 QLAVLTGEP 537>XP_006717165 Length = 1343 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RVAVLNGQP 9 ++AVL G+P Sbjct: 556 QLAVLTGEP 564>XP_005247551 Length = 1855 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VLNGQP 9 +LNGQP Sbjct: 489 LLNGQP 494>XP_005247550 Length = 1856 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VLNGQP 9 +LNGQP Sbjct: 558 LLNGQP 563>XP_006713712 Length = 1923 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VLNGQP 9 +LNGQP Sbjct: 558 LLNGQP 563>XP_005247549 Length = 1924 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VLNGQP 9 +LNGQP Sbjct: 558 LLNGQP 563>XP_006712608 Length = 533 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 VAVLNGQP 9 + VLNG P Sbjct: 169 ITVLNGAP 176>XP_005244900 Length = 424 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VAVLNGQ 8 VAVLNG+ Sbjct: 336 VAVLNGK 342>NP_003202 Length = 410 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RVAVLNGQ 8 R+AV NG+ Sbjct: 225 RIAVFNGK 232>NP_006840 Length = 525 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 AVLNGQ 8 AVLNGQ Sbjct: 366 AVLNGQ 371>NP_001070248 Length = 991 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RVAVLNGQ 8 R+AVL GQ Sbjct: 636 RLAVLRGQ 643>NP_001191335 Length = 218 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AVLNGQP 9 AVL+G+P Sbjct: 48 AVLSGEP 54>NP_001263256 Length = 445 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RVAVLNGQ 8 RVA +NG+ Sbjct: 193 RVAAINGK 200>NP_001263255 Length = 519 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RVAVLNGQ 8 RVA +NG+ Sbjct: 267 RVAAINGK 274>NP_700357 Length = 332 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RVAVLNGQ 8 RVA +NG+ Sbjct: 80 RVAAINGK 87>NP_653186 Length = 553 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RVAVLNGQ 8 RVA +NG+ Sbjct: 301 RVAAINGK 308>NP_001157413 Length = 1257 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 VLNGQP 9 +LNG+P Sbjct: 313 ILNGEP 318>NP_001264044 Length = 4516 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 AVLNGQ 8 A+LNGQ Sbjct: 498 AILNGQ 503>XP_006718494 Length = 543 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RVAVLNGQ 8 RVA +NG+ Sbjct: 291 RVAAINGK 298>XP_005273799 Length = 578 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RVAVLNGQ 8 RVA +NG+ Sbjct: 326 RVAAINGK 333>XP_006718493 Length = 578 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RVAVLNGQ 8 RVA +NG+ Sbjct: 326 RVAAINGK 333>XP_005250558 Length = 1024 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RVAVLNGQ 8 RVA++NG+ Sbjct: 485 RVALVNGK 492>XP_006715785 Length = 279 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 VLNGQP 9 +LNG+P Sbjct: 16 ILNGEP 21Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.319 0.138 0.397 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 622,178 Number of extensions: 944 Number of successful extensions: 73 Number of sequences better than 10000.0: 73 Number of HSP's gapped: 73 Number of HSP's successfully gapped: 73 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |