Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 22 103 NP_001075109 22 103 NP_078789 18 1935 NP_055565 18 1935 NP_001139487 18 1935 XP_006713398 18 1935 XP_006713397 18 1935 XP_006713396 18 1935 NP_001175 17 2528 NP_060223 17 4312 NP_997182 17 4312 NP_075573 16 5631 NP_075571 16 5631 NP_001231509 16 5631 NP_003487 16 5631 NP_000921 16 5631 NP_127509 16 5631 NP_671766 16 5631 NP_671756 16 5631 NP_003734 16 5631 XP_006712189 16 5631 XP_005264685 16 5631 XP_005264684 16 5631 XP_005264683 16 5631 XP_005264682 16 5631 NP_079033 16 7355 NP_000042 16 7355 NP_001138999 16 7355 NP_001131145 16 7355 NP_861454 16 7355 NP_703194 16 7355 NP_060090 16 7355 NP_036350 16 7355 NP_004507 16 7355 NP_005087 16 7355 NP_001123583 16 7355 NP_112490 16 7355 NP_001164633 16 7355 NP_963893 16 7355 XP_005262367 16 7355 XP_006724778 16 7355 XP_005262366 16 7355 XP_006722981 16 7355 XP_005259952 16 7355 XP_006722805 16 7355 XP_005254395 16 7355 XP_006718908 16 7355 XP_005271621 16 7355 XP_006718907 16 7355 XP_006718906 16 7355 XP_005271619 16 7355 XP_005271618 16 7355 XP_006717353 16 7355 XP_005266168 16 7355 XP_006717352 16 7355 XP_005266166 16 7355 XP_005266167 16 7355 XP_005266165 16 7355 XP_005266164 16 7355 XP_006717351 16 7355 XP_005266163 16 7355 XP_005266162 16 7355 NP_001156334 15 9605 NP_001156333 15 9605 NP_116026 15 9605 NP_005974 15 9605 NP_001230049 15 9605 NP_001126 15 9605 NP_037359 15 9605 NP_004366 15 9605 NP_114432 15 9605 NP_006435 15 9605 NP_001036016 15 9605 NP_001252531 15 9605 NP_055086 15 9605 NP_001036015 15 9605 NP_002855 15 9605 NP_510883 15 9605 XP_005274498 15 9605 XP_006721768 15 9605 XP_006721767 15 9605 XP_005255037 15 9605 XP_006720482 15 9605 XP_005268066 15 9605 XP_006716996 15 9605 XP_006714550 15 9605 NP_055182 15 9605>NP_008835 Length = 4128 Score = 21.9 bits (45), Expect = 103 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RTYSIVPMT 9 RTYS+VPMT Sbjct: 3789 RTYSVVPMT 3797>NP_001075109 Length = 4097 Score = 21.9 bits (45), Expect = 103 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RTYSIVPMT 9 RTYS+VPMT Sbjct: 3789 RTYSVVPMT 3797>NP_078789 Length = 1478 Score = 17.7 bits (34), Expect = 1935 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TYSIVPMT 9 TYS++P+T Sbjct: 1373 TYSLIPIT 1380>NP_055565 Length = 846 Score = 17.7 bits (34), Expect = 1935 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RTYSIVPMT 9 +TY + PMT Sbjct: 321 KTYQVTPMT 329>NP_001139487 Length = 842 Score = 17.7 bits (34), Expect = 1935 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RTYSIVPMT 9 +TY + PMT Sbjct: 321 KTYQVTPMT 329>XP_006713398 Length = 1478 Score = 17.7 bits (34), Expect = 1935 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TYSIVPMT 9 TYS++P+T Sbjct: 1373 TYSLIPIT 1380>XP_006713397 Length = 1478 Score = 17.7 bits (34), Expect = 1935 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TYSIVPMT 9 TYS++P+T Sbjct: 1373 TYSLIPIT 1380>XP_006713396 Length = 1478 Score = 17.7 bits (34), Expect = 1935 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TYSIVPMT 9 TYS++P+T Sbjct: 1373 TYSLIPIT 1380>NP_001175 Length = 2644 Score = 17.3 bits (33), Expect = 2528 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 RTYSIVPM 8 RTY+++P+ Sbjct: 2363 RTYAVIPL 2370>NP_060223 Length = 325 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RTYSIVP 7 R+YSI+P Sbjct: 9 RSYSIIP 15>NP_997182 Length = 325 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RTYSIVP 7 R+YSI+P Sbjct: 9 RSYSIIP 15>NP_075573 Length = 517 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TYSIVPMT 9 TY +VP T Sbjct: 467 TYKVVPST 474>NP_075571 Length = 672 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TYSIVPMT 9 TY +VP T Sbjct: 622 TYKVVPST 629>NP_001231509 Length = 3859 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RTYSIVP 7 RT+SI+P Sbjct: 210 RTHSIIP 216>NP_003487 Length = 3830 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RTYSIVP 7 RT+SI+P Sbjct: 210 RTHSIIP 216>NP_000921 Length = 562 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RTYSIVP 7 RTY +VP Sbjct: 374 RTYRVVP 380>NP_127509 Length = 516 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RTYSIVP 7 RTY +VP Sbjct: 328 RTYRVVP 334>NP_671766 Length = 1440 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RTYSIVPMT 9 R+YS +P+T Sbjct: 531 RSYSNIPVT 539>NP_671756 Length = 1399 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RTYSIVPMT 9 R+YS +P+T Sbjct: 531 RSYSNIPVT 539>NP_003734 Length = 1441 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RTYSIVPMT 9 R+YS +P+T Sbjct: 531 RSYSNIPVT 539>XP_006712189 Length = 1394 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RTYSIVPMT 9 R+YS +P+T Sbjct: 484 RSYSNIPVT 492>XP_005264685 Length = 1399 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RTYSIVPMT 9 R+YS +P+T Sbjct: 531 RSYSNIPVT 539>XP_005264684 Length = 1399 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RTYSIVPMT 9 R+YS +P+T Sbjct: 531 RSYSNIPVT 539>XP_005264683 Length = 1440 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RTYSIVPMT 9 R+YS +P+T Sbjct: 531 RSYSNIPVT 539>XP_005264682 Length = 1441 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RTYSIVPMT 9 R+YS +P+T Sbjct: 531 RSYSNIPVT 539>NP_079033 Length = 1298 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TYSIVP 7 TYS+VP Sbjct: 295 TYSLVP 300>NP_000042 Length = 3056 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 TYSIVPMT 9 TY +VP++ Sbjct: 2754 TYKVVPLS 2761>NP_001138999 Length = 808 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TYSIVP 7 TYS+VP Sbjct: 295 TYSLVP 300>NP_001131145 Length = 706 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 TYSIVPM 8 TY+I PM Sbjct: 364 TYAITPM 370>NP_861454 Length = 551 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TYSIVPM 8 TYS+VP+ Sbjct: 116 TYSMVPI 122>NP_703194 Length = 690 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 TYSIVPM 8 TY+I PM Sbjct: 364 TYAITPM 370>NP_060090 Length = 898 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 TYSIVPM 8 TY+I PM Sbjct: 364 TYAITPM 370>NP_036350 Length = 894 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 TYSIVPM 8 TY+I PM Sbjct: 364 TYAITPM 370>NP_004507 Length = 702 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 TYSIVPM 8 TY+I PM Sbjct: 364 TYAITPM 370>NP_005087 Length = 1370 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 YSIVPM 8 YS++PM Sbjct: 1334 YSVIPM 1339>NP_001123583 Length = 310 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TYSIVP 7 TYS+VP Sbjct: 34 TYSLVP 39>NP_112490 Length = 361 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TYSIVP 7 TYS+VP Sbjct: 34 TYSLVP 39>NP_001164633 Length = 1358 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 YSIVPM 8 YS++PM Sbjct: 1322 YSVIPM 1327>NP_963893 Length = 1370 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 YSIVPM 8 YS++PM Sbjct: 1334 YSVIPM 1339>XP_005262367 Length = 1358 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 YSIVPM 8 YS++PM Sbjct: 1322 YSVIPM 1327>XP_006724778 Length = 1370 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 YSIVPM 8 YS++PM Sbjct: 1334 YSVIPM 1339>XP_005262366 Length = 1370 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 YSIVPM 8 YS++PM Sbjct: 1334 YSVIPM 1339>XP_006722981 Length = 310 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TYSIVP 7 TYS+VP Sbjct: 34 TYSLVP 39>XP_005259952 Length = 633 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 TYSIVPM 8 TY+I PM Sbjct: 99 TYAITPM 105>XP_006722805 Length = 855 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 TYSIVPM 8 TY+I PM Sbjct: 364 TYAITPM 370>XP_005254395 Length = 353 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TYSIVPM 8 TYS+VP+ Sbjct: 116 TYSMVPI 122>XP_006718908 Length = 1708 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 TYSIVPMT 9 TY +VP++ Sbjct: 1406 TYKVVPLS 1413>XP_005271621 Length = 2708 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 TYSIVPMT 9 TY +VP++ Sbjct: 2406 TYKVVPLS 2413>XP_006718907 Length = 3050 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 TYSIVPMT 9 TY +VP++ Sbjct: 2748 TYKVVPLS 2755>XP_006718906 Length = 3056 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 TYSIVPMT 9 TY +VP++ Sbjct: 2754 TYKVVPLS 2761>XP_005271619 Length = 3056 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 TYSIVPMT 9 TY +VP++ Sbjct: 2754 TYKVVPLS 2761>XP_005271618 Length = 3056 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 TYSIVPMT 9 TY +VP++ Sbjct: 2754 TYKVVPLS 2761>XP_006717353 Length = 1243 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TYSIVP 7 TYS+VP Sbjct: 288 TYSLVP 293>XP_005266168 Length = 927 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TYSIVP 7 TYS+VP Sbjct: 295 TYSLVP 300>XP_006717352 Length = 1250 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TYSIVP 7 TYS+VP Sbjct: 295 TYSLVP 300>XP_005266166 Length = 1267 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TYSIVP 7 TYS+VP Sbjct: 264 TYSLVP 269>XP_005266167 Length = 1267 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TYSIVP 7 TYS+VP Sbjct: 264 TYSLVP 269>XP_005266165 Length = 1272 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TYSIVP 7 TYS+VP Sbjct: 295 TYSLVP 300>XP_005266164 Length = 1291 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TYSIVP 7 TYS+VP Sbjct: 288 TYSLVP 293>XP_006717351 Length = 1292 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TYSIVP 7 TYS+VP Sbjct: 289 TYSLVP 294>XP_005266163 Length = 1294 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TYSIVP 7 TYS+VP Sbjct: 291 TYSLVP 296>XP_005266162 Length = 1295 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TYSIVP 7 TYS+VP Sbjct: 292 TYSLVP 297>NP_001156334 Length = 231 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TYSIVP 7 TY+IVP Sbjct: 200 TYNIVP 205>NP_001156333 Length = 230 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TYSIVP 7 TY+IVP Sbjct: 200 TYNIVP 205>NP_116026 Length = 410 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 RTYSIVPMT 9 R Y I+P T Sbjct: 344 RCYDIIPET 352>NP_005974 Length = 424 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 RTYSIVPMT 9 R Y I+P T Sbjct: 344 RCYDIIPET 352>NP_001230049 Length = 210 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 RTYSIVPMT 9 R Y I+P T Sbjct: 130 RCYDIIPET 138>NP_001126 Length = 2431 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 RTYSIVPMT 9 RTY + P T Sbjct: 556 RTYGVRPST 564>NP_037359 Length = 2530 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 RTYSIVPMT 9 RTY + P T Sbjct: 556 RTYGVRPST 564>NP_004366 Length = 276 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TYSIVP 7 TY+IVP Sbjct: 200 TYNIVP 205>NP_114432 Length = 1249 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 YSIVPMT 9 YS VPMT Sbjct: 268 YSGVPMT 274>NP_006435 Length = 1197 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 RTYSIVPM 8 R Y+I+P+ Sbjct: 571 RRYTIIPL 578>NP_001036016 Length = 1197 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 RTYSIVPM 8 R Y+I+P+ Sbjct: 571 RRYTIIPL 578>NP_001252531 Length = 1197 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 RTYSIVPM 8 R Y+I+P+ Sbjct: 571 RRYTIIPL 578>NP_055086 Length = 696 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TYSIVPMT 9 TY +PMT Sbjct: 648 TYCNIPMT 655>NP_001036015 Length = 1197 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 RTYSIVPM 8 R Y+I+P+ Sbjct: 571 RRYTIIPL 578>NP_002855 Length = 1482 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 7/7 (100%) Query: 2 TYSIVPM 8 TY+++P+ Sbjct: 718 TYNVIPL 724>NP_510883 Length = 247 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 RTYSIVP 7 RT+++VP Sbjct: 47 RTFTVVP 53>XP_005274498 Length = 696 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TYSIVPMT 9 TY +PMT Sbjct: 648 TYCNIPMT 655>XP_006721768 Length = 276 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TYSIVP 7 TY+IVP Sbjct: 200 TYNIVP 205>XP_006721767 Length = 276 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TYSIVP 7 TY+IVP Sbjct: 200 TYNIVP 205>XP_005255037 Length = 347 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 RTYSIVP 7 RT+++VP Sbjct: 185 RTFTVVP 191>XP_006720482 Length = 2568 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 RTYSIVPMT 9 RTY + P T Sbjct: 556 RTYGVRPST 564>XP_005268066 Length = 1172 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 TYSIVPM 8 TY I+P+ Sbjct: 207 TYEIIPL 213>XP_006716996 Length = 1197 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 RTYSIVPM 8 R Y+I+P+ Sbjct: 571 RRYTIIPL 578>XP_006714550 Length = 379 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 RTYSIVPMT 9 R Y I+P T Sbjct: 299 RCYDIIPET 307>NP_055182 Length = 154 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RTYSIVPM 8 RTY+ VP+ Sbjct: 53 RTYNRVPL 60Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.325 0.131 0.379 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 625,238 Number of extensions: 1590 Number of successful extensions: 87 Number of sequences better than 10000.0: 87 Number of HSP's gapped: 87 Number of HSP's successfully gapped: 87 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |