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Blast-Search of mutated query peptide against human proteome

BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_004976                                                              20     390
NP_203524                                                              20     390
XP_006719132                                                           20     390
NP_002515                                                              20     509
NP_000834                                                              18    1935
NP_004597                                                              17    4312
NP_001273003                                                           17    4312
NP_620278                                                              17    4312
XP_006724745                                                           17    4312
XP_006724744                                                           17    4312
XP_005262354                                                           17    4312
XP_006724743                                                           17    4312
XP_005262353                                                           17    4312
XP_005262352                                                           17    4312
NP_056234                                                              16    5631
XP_005274542                                                           16    5631
NP_789765                                                              16    7355
NP_001123914                                                           16    7355
NP_005334                                                              16    7355
XP_006725199                                                           16    7355
XP_006718280                                                           16    7355
NP_055938                                                              15    9605
NP_001028895                                                           15    9605
XP_005251336                                                           15    9605
XP_006716527                                                           15    9605
XP_005264780                                                           15    9605
XP_006713127                                                           15    9605
XP_006713126                                                           15    9605
XP_005264779                                                           15    9605
XP_005264778                                                           15    9605
XP_005264777                                                           15    9605

>NP_004976
          Length = 188

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   RTVDTKQAR 9
           RTVDTKQA+
Sbjct: 123 RTVDTKQAQ 131



>NP_203524
          Length = 189

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   RTVDTKQAR 9
           RTVDTKQA+
Sbjct: 123 RTVDTKQAQ 131



>XP_006719132
          Length = 189

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   RTVDTKQAR 9
           RTVDTKQA+
Sbjct: 123 RTVDTKQAQ 131



>NP_002515
          Length = 189

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1   RTVDTKQA 8
           RTVDTKQA
Sbjct: 123 RTVDTKQA 130



>NP_000834
          Length = 877

 Score = 17.7 bits (34), Expect =  1935
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1   RTVDTKQAR 9
           RTVD +QAR
Sbjct: 731 RTVDPEQAR 739



>NP_004597
          Length = 1893

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1    RTVDTKQAR 9
            RT+ T+QAR
Sbjct: 1051 RTMSTEQAR 1059



>NP_001273003
          Length = 1895

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1    RTVDTKQAR 9
            RT+ T+QAR
Sbjct: 1051 RTMSTEQAR 1059



>NP_620278
          Length = 1872

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1    RTVDTKQAR 9
            RT+ T+QAR
Sbjct: 1030 RTMSTEQAR 1038



>XP_006724745
          Length = 1800

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   RTVDTKQAR 9
           RT+ T+QAR
Sbjct: 924 RTMSTEQAR 932



>XP_006724744
          Length = 1851

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1    RTVDTKQAR 9
            RT+ T+QAR
Sbjct: 1051 RTMSTEQAR 1059



>XP_005262354
          Length = 1906

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1    RTVDTKQAR 9
            RT+ T+QAR
Sbjct: 1030 RTMSTEQAR 1038



>XP_006724743
          Length = 1924

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1    RTVDTKQAR 9
            RT+ T+QAR
Sbjct: 1051 RTMSTEQAR 1059



>XP_005262353
          Length = 1926

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1    RTVDTKQAR 9
            RT+ T+QAR
Sbjct: 1051 RTMSTEQAR 1059



>XP_005262352
          Length = 1927

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1    RTVDTKQAR 9
            RT+ T+QAR
Sbjct: 1051 RTMSTEQAR 1059



>NP_056234
          Length = 2828

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   TVDTKQAR 9
           T DT+QAR
Sbjct: 465 TKDTRQAR 472



>XP_005274542
          Length = 2853

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   TVDTKQAR 9
           T DT+QAR
Sbjct: 490 TKDTRQAR 497



>NP_789765
          Length = 170

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 9/9 (100%)

Query: 1   RTVDTKQAR 9
           RTV+++QA+
Sbjct: 123 RTVESRQAQ 131



>NP_001123914
          Length = 189

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 9/9 (100%)

Query: 1   RTVDTKQAR 9
           RTV+++QA+
Sbjct: 123 RTVESRQAQ 131



>NP_005334
          Length = 189

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 9/9 (100%)

Query: 1   RTVDTKQAR 9
           RTV+++QA+
Sbjct: 123 RTVESRQAQ 131



>XP_006725199
          Length = 170

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 9/9 (100%)

Query: 1   RTVDTKQAR 9
           RTV+++QA+
Sbjct: 123 RTVESRQAQ 131



>XP_006718280
          Length = 170

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 9/9 (100%)

Query: 1   RTVDTKQAR 9
           RTV+++QA+
Sbjct: 123 RTVESRQAQ 131



>NP_055938
          Length = 1034

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   VDTKQAR 9
           VDT+Q+R
Sbjct: 634 VDTRQSR 640



>NP_001028895
          Length = 412

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1  RTVDTKQA 8
          +T DTK+A
Sbjct: 33 KTADTKKA 40



>XP_005251336
          Length = 412

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1  RTVDTKQA 8
          +T DTK+A
Sbjct: 33 KTADTKKA 40



>XP_006716527
          Length = 378

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1  RTVDTKQA 8
          +T DTK+A
Sbjct: 33 KTADTKKA 40



>XP_005264780
          Length = 686

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   VDTKQAR 9
           VDT+Q+R
Sbjct: 286 VDTRQSR 292



>XP_006713127
          Length = 745

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   VDTKQAR 9
           VDT+Q+R
Sbjct: 345 VDTRQSR 351



>XP_006713126
          Length = 980

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   VDTKQAR 9
           VDT+Q+R
Sbjct: 580 VDTRQSR 586



>XP_005264779
          Length = 989

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   VDTKQAR 9
           VDT+Q+R
Sbjct: 589 VDTRQSR 595



>XP_005264778
          Length = 1001

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   VDTKQAR 9
           VDT+Q+R
Sbjct: 601 VDTRQSR 607



>XP_005264777
          Length = 1003

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   VDTKQAR 9
           VDT+Q+R
Sbjct: 603 VDTRQSR 609



  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.314    0.118    0.300 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 376,954
Number of extensions: 472
Number of successful extensions: 31
Number of sequences better than 10000.0: 31
Number of HSP's gapped: 31
Number of HSP's successfully gapped: 31
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.8 bits)
S2: 28 (15.4 bits)