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Blast-Search of mutated query peptide against human proteome

BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_001257436                                                           18    1135
NP_001257437                                                           18    1135
NP_006281                                                              18    1135
XP_006715618                                                           18    1135
XP_005267176                                                           18    1135
NP_006182                                                              16    5631
NP_055898                                                              16    5631
NP_057591                                                              16    5631
NP_775768                                                              16    5631
NP_001271203                                                           16    5631
NP_877497                                                              16    5631
XP_005257515                                                           16    5631
XP_005257513                                                           16    5631
NP_775871                                                              16    7355
NP_065128                                                              15    9605
NP_001135943                                                           15    9605
NP_001177736                                                           15    9605
NP_683725                                                              15    9605
XP_005263206                                                           15    9605
XP_005263205                                                           15    9605

>NP_001257436
          Length = 790

 Score = 18.5 bits (36), Expect =  1135
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   RTTVEASSS 9
           RTT EASSS
Sbjct: 542 RTTAEASSS 550



>NP_001257437
          Length = 790

 Score = 18.5 bits (36), Expect =  1135
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   RTTVEASSS 9
           RTT EASSS
Sbjct: 542 RTTAEASSS 550



>NP_006281
          Length = 790

 Score = 18.5 bits (36), Expect =  1135
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   RTTVEASSS 9
           RTT EASSS
Sbjct: 542 RTTAEASSS 550



>XP_006715618
          Length = 577

 Score = 18.5 bits (36), Expect =  1135
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   RTTVEASSS 9
           RTT EASSS
Sbjct: 329 RTTAEASSS 337



>XP_005267176
          Length = 790

 Score = 18.5 bits (36), Expect =  1135
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   RTTVEASSS 9
           RTT EASSS
Sbjct: 542 RTTAEASSS 550



>NP_006182
          Length = 394

 Score = 16.2 bits (30), Expect =  5631
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1  RTTVEASSS 9
          R+ VEASSS
Sbjct: 33 RSLVEASSS 41



>NP_055898
          Length = 1481

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 9/9 (100%)

Query: 1    RTTVEASSS 9
            +TT+EASS+
Sbjct: 1194 QTTLEASST 1202



>NP_057591
          Length = 1490

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 9/9 (100%)

Query: 1    RTTVEASSS 9
            +TT+EASS+
Sbjct: 1194 QTTLEASST 1202



>NP_775768
          Length = 207

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 9/9 (100%)

Query: 1   RTTVEASSS 9
           RT+++ASSS
Sbjct: 105 RTSMDASSS 113



>NP_001271203
          Length = 780

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 9/9 (100%)

Query: 1   RTTVEASSS 9
           RT+++ASSS
Sbjct: 105 RTSMDASSS 113



>NP_877497
          Length = 776

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 9/9 (100%)

Query: 1   RTTVEASSS 9
           RT+++ASSS
Sbjct: 105 RTSMDASSS 113



>XP_005257515
          Length = 1256

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 9/9 (100%)

Query: 1    RTTVEASSS 9
            +TT+EASS+
Sbjct: 1194 QTTLEASST 1202



>XP_005257513
          Length = 1489

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 9/9 (100%)

Query: 1    RTTVEASSS 9
            +TT+EASS+
Sbjct: 1193 QTTLEASST 1201



>NP_775871
          Length = 8384

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 9/9 (100%)

Query: 1    RTTVEASSS 9
            R+T+EA++S
Sbjct: 7886 RSTIEATTS 7894



>NP_065128
          Length = 462

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   RTTVEASSS 9
           +TT E+SSS
Sbjct: 419 KTTSESSSS 427



>NP_001135943
          Length = 462

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   RTTVEASSS 9
           +TT E+SSS
Sbjct: 419 KTTSESSSS 427



>NP_001177736
          Length = 124

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2  TTVEASSS 9
          TT+++SSS
Sbjct: 91 TTIDSSSS 98



>NP_683725
          Length = 134

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   TTVEASSS 9
           TT+++SSS
Sbjct: 101 TTIDSSSS 108



>XP_005263206
          Length = 462

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   RTTVEASSS 9
           +TT E+SSS
Sbjct: 419 KTTSESSSS 427



>XP_005263205
          Length = 462

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   RTTVEASSS 9
           +TT E+SSS
Sbjct: 419 KTTSESSSS 427



  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.279   0.0881    0.184 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 271,468
Number of extensions: 245
Number of successful extensions: 20
Number of sequences better than 10000.0: 20
Number of HSP's gapped: 20
Number of HSP's successfully gapped: 20
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 18 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (14.8 bits)
S2: 28 (15.4 bits)