Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_115803 20 299 NP_031376 17 2528 XP_006710239 17 2528 NP_891550 17 3301 XP_005265386 17 3301 NP_001035362 17 4312 NP_005711 17 4312 XP_006715889 17 4312 XP_006715888 17 4312 NP_001273004 16 5631 NP_004311 16 5631 NP_775293 16 5631 NP_995318 16 5631 NP_001152980 16 5631 NP_002216 16 5631 NP_892005 16 5631 NP_612501 16 5631 NP_001107604 16 5631 XP_006720557 16 5631 XP_006720556 16 5631 XP_006720555 16 5631 XP_006720554 16 5631 XP_005254407 16 5631 XP_005254346 16 5631 XP_005254347 16 5631 XP_005246845 16 5631 XP_006712765 16 5631 XP_006712764 16 5631 XP_005246844 16 5631 XP_006712763 16 5631 XP_006712762 16 5631 XP_006712761 16 5631 NP_065863 16 7355 XP_005260057 16 7355 XP_006722867 16 7355 XP_006722866 16 7355 XP_006722865 16 7355 XP_005260058 16 7355 NP_001004457 16 7355 NP_001129628 15 9605 NP_001269869 15 9605 NP_001034934 15 9605 NP_002171 15 9605 NP_001158058 15 9605 NP_001229769 15 9605 NP_055725 15 9605 XP_006725395 15 9605 XP_006722056 15 9605 XP_005274034 15 9605 XP_005274033 15 9605 XP_006712965 15 9605 XP_005246372 15 9605 XP_005273163 15 9605 XP_005273162 15 9605 XP_005273160 15 9605 XP_005270390 15 9605 XP_006711823 15 9605 XP_006711680 15 9605 XP_005245637 15 9605 NP_733843 15 9605 NP_001017434 15 9605>NP_115803 Length = 1156 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RTRIAVCRQ 9 R RIAVCRQ Sbjct: 41 RARIAVCRQ 49>NP_031376 Length = 401 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RTRIAVCR 8 RTR+++CR Sbjct: 74 RTRLSLCR 81>XP_006710239 Length = 485 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RTRIAVCR 8 R+R++VCR Sbjct: 340 RSRVSVCR 347>NP_891550 Length = 1935 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RTRIAVCRQ 9 RTR+ VC++ Sbjct: 1403 RTRLVVCQR 1411>XP_005265386 Length = 1907 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RTRIAVCRQ 9 RTR+ VC++ Sbjct: 1375 RTRLVVCQR 1383>NP_001035362 Length = 1762 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RTRIAVCRQ 9 +TR A+CR+ Sbjct: 809 QTRSAICRK 817>NP_005711 Length = 372 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RTRIAVC 7 RT+IA+C Sbjct: 20 RTQIAIC 26>XP_006715889 Length = 372 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RTRIAVC 7 RT+IA+C Sbjct: 20 RTQIAIC 26>XP_006715888 Length = 372 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RTRIAVC 7 RT+IA+C Sbjct: 20 RTQIAIC 26>NP_001273004 Length = 869 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TRIAVCRQ 9 T IA+CR+ Sbjct: 506 TAIAICRR 513>NP_004311 Length = 994 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TRIAVCRQ 9 T IA+CR+ Sbjct: 631 TAIAICRR 638>NP_775293 Length = 1001 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TRIAVCRQ 9 T IA+CR+ Sbjct: 631 TAIAICRR 638>NP_995318 Length = 177 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RTRIAVCR 8 R RIA+C+ Sbjct: 53 RKRIAICQ 60>NP_001152980 Length = 396 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TRIAVCRQ 9 TR+ CRQ Sbjct: 304 TRLMACRQ 311>NP_002216 Length = 426 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TRIAVCRQ 9 TR+ CRQ Sbjct: 334 TRLMACRQ 341>NP_892005 Length = 189 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RTRIAVCR 8 R RIA+C+ Sbjct: 53 RKRIAICQ 60>NP_612501 Length = 148 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RTRIAVCR 8 R RIA+C+ Sbjct: 24 RKRIAICQ 31>NP_001107604 Length = 2694 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 RIAVCRQ 9 R+A+CR+ Sbjct: 1236 RVAICRK 1242>XP_006720557 Length = 389 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TRIAVCRQ 9 TR+ CRQ Sbjct: 334 TRLMACRQ 341>XP_006720556 Length = 418 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TRIAVCRQ 9 TR+ CRQ Sbjct: 334 TRLMACRQ 341>XP_006720555 Length = 447 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TRIAVCRQ 9 TR+ CRQ Sbjct: 334 TRLMACRQ 341>XP_006720554 Length = 468 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TRIAVCRQ 9 TR+ CRQ Sbjct: 315 TRLMACRQ 322>XP_005254407 Length = 487 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TRIAVCRQ 9 TR+ CRQ Sbjct: 334 TRLMACRQ 341>XP_005254346 Length = 483 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 RTRIAVCRQ 9 +TR+ +CR+ Sbjct: 13 KTRLRLCRE 21>XP_005254347 Length = 483 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 RTRIAVCRQ 9 +TR+ +CR+ Sbjct: 13 KTRLRLCRE 21>XP_005246845 Length = 1624 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 RIAVCRQ 9 R+A+CR+ Sbjct: 153 RVAICRK 159>XP_006712765 Length = 2679 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 RIAVCRQ 9 R+A+CR+ Sbjct: 1208 RVAICRK 1214>XP_006712764 Length = 2697 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 RIAVCRQ 9 R+A+CR+ Sbjct: 1265 RVAICRK 1271>XP_005246844 Length = 2707 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 RIAVCRQ 9 R+A+CR+ Sbjct: 1236 RVAICRK 1242>XP_006712763 Length = 2716 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 RIAVCRQ 9 R+A+CR+ Sbjct: 1265 RVAICRK 1271>XP_006712762 Length = 2723 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 RIAVCRQ 9 R+A+CR+ Sbjct: 1265 RVAICRK 1271>XP_006712761 Length = 2736 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 RIAVCRQ 9 R+A+CR+ Sbjct: 1265 RVAICRK 1271>NP_065863 Length = 2047 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RTRIAVCRQ 9 +TRI VC + Sbjct: 1886 KTRIRVCHR 1894>XP_005260057 Length = 2113 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RTRIAVCRQ 9 +TRI VC + Sbjct: 1952 KTRIRVCHR 1960>XP_006722867 Length = 1159 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RTRIAVCRQ 9 +TRI VC + Sbjct: 998 KTRIRVCHR 1006>XP_006722866 Length = 1778 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RTRIAVCRQ 9 +TRI VC + Sbjct: 1617 KTRIRVCHR 1625>XP_006722865 Length = 2078 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RTRIAVCRQ 9 +TRI VC + Sbjct: 1917 KTRIRVCHR 1925>XP_005260058 Length = 2082 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RTRIAVCRQ 9 +TRI VC + Sbjct: 1921 KTRIRVCHR 1929>NP_001004457 Length = 330 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TRIAVCRQ 9 TR+A C Q Sbjct: 181 TRVAFCAQ 188>NP_001129628 Length = 953 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RTRIAVCRQ 9 +TRI C+Q Sbjct: 693 KTRIYQCKQ 701>NP_001269869 Length = 517 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 RTRIAVCR 8 R+R+ +CR Sbjct: 230 RSRVPLCR 237>NP_001034934 Length = 518 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 RTRIAVCR 8 R+R+ +CR Sbjct: 230 RSRVPLCR 237>NP_002171 Length = 993 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 RIAVCRQ 9 R+A+C+Q Sbjct: 254 RLALCKQ 260>NP_001158058 Length = 3708 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 RTRIAVCRQ 9 R R+A C Q Sbjct: 3491 RIRVAACPQ 3499>NP_001229769 Length = 241 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RTRIAVC 7 R R+AVC Sbjct: 189 RLRLAVC 195>NP_055725 Length = 953 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RTRIAVCRQ 9 +TRI C+Q Sbjct: 693 KTRIYQCKQ 701>XP_006725395 Length = 1249 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 RTRIAVCR 8 RTR +CR Sbjct: 1209 RTRAPLCR 1216>XP_006722056 Length = 1249 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 RTRIAVCR 8 RTR +CR Sbjct: 1209 RTRAPLCR 1216>XP_005274034 Length = 508 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 RIAVCRQ 9 R+A+C+Q Sbjct: 254 RLALCKQ 260>XP_005274033 Length = 540 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 RIAVCRQ 9 R+A+C+Q Sbjct: 254 RLALCKQ 260>XP_006712965 Length = 423 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 1 RTRIAVCR 8 RTR CR Sbjct: 47 RTRTTACR 54>XP_005246372 Length = 420 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 RTRIAVCR 8 R+R+ +CR Sbjct: 132 RSRVPLCR 139>XP_005273163 Length = 220 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RTRIAVC 7 R R+AVC Sbjct: 168 RLRLAVC 174>XP_005273162 Length = 220 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RTRIAVC 7 R R+AVC Sbjct: 168 RLRLAVC 174>XP_005273160 Length = 286 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RTRIAVC 7 R R+AVC Sbjct: 234 RLRLAVC 240>XP_005270390 Length = 589 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RTRIAVC 7 RTR A+C Sbjct: 557 RTRCALC 563>XP_006711823 Length = 592 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RTRIAVC 7 RTR A+C Sbjct: 560 RTRCALC 566>XP_006711680 Length = 3617 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 RTRIAVCRQ 9 R R+A C Q Sbjct: 3400 RIRVAACPQ 3408>XP_005245637 Length = 3683 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 RTRIAVCRQ 9 R R+A C Q Sbjct: 3466 RIRVAACPQ 3474>NP_733843 Length = 592 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RTRIAVC 7 RTR A+C Sbjct: 560 RTRCALC 566>NP_001017434 Length = 341 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RTRIAVC 7 RTR A+C Sbjct: 309 RTRCALC 315Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.346 0.138 0.444 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 580,240 Number of extensions: 609 Number of successful extensions: 61 Number of sequences better than 10000.0: 61 Number of HSP's gapped: 61 Number of HSP's successfully gapped: 61 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |