Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005742 19 869 NP_671714 19 869 XP_006715890 19 869 XP_005250160 19 869 XP_005250159 19 869 NP_002435 17 3301 XP_005262326 17 3301 NP_037379 16 5631 NP_659540 16 5631 NP_653321 16 5631 NP_001092903 16 5631 NP_065885 16 5631 NP_001098991 16 5631 XP_006717843 16 5631 XP_005252734 16 5631 XP_005252733 16 5631 XP_005252732 16 5631 XP_005252731 16 5631 XP_005252730 16 5631 XP_005252729 16 5631 XP_005264323 16 5631 NP_001139784 16 7355 NP_705832 16 7355 NP_054767 16 7355 XP_005256920 16 7355 XP_006720977 16 7355 XP_006720976 16 7355 XP_006720975 16 7355 XP_005255512 16 7355 XP_006720974 16 7355 XP_005255510 16 7355 XP_006720973 16 7355 XP_006720972 16 7355 XP_006720971 16 7355 XP_005255508 16 7355 XP_005255509 16 7355 NP_776248 15 9605 NP_009117 15 9605 NP_055986 15 9605 NP_065905 15 9605 NP_001257869 15 9605 XP_005260322 15 9605 XP_005260321 15 9605 XP_005260320 15 9605 XP_006723758 15 9605 XP_006723757 15 9605 XP_006723756 15 9605 XP_006723755 15 9605 XP_006723754 15 9605 XP_006723753 15 9605 XP_005260319 15 9605 XP_006722578 15 9605 XP_005266789 15 9605 XP_006722577 15 9605 XP_006722576 15 9605 XP_005266788 15 9605 XP_005266787 15 9605 XP_005255257 15 9605 XP_005255256 15 9605 XP_005255255 15 9605 XP_005255254 15 9605 XP_005255252 15 9605>NP_005742 Length = 3907 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RTREQLAVE 9 R REQLAVE Sbjct: 1908 RAREQLAVE 1916>NP_671714 Length = 3899 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RTREQLAVE 9 R REQLAVE Sbjct: 1908 RAREQLAVE 1916>XP_006715890 Length = 3860 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RTREQLAVE 9 R REQLAVE Sbjct: 1861 RAREQLAVE 1869>XP_005250160 Length = 3939 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RTREQLAVE 9 R REQLAVE Sbjct: 1940 RAREQLAVE 1948>XP_005250159 Length = 3952 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RTREQLAVE 9 R REQLAVE Sbjct: 1940 RAREQLAVE 1948>NP_002435 Length = 577 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 RTREQLAVE 9 +T+EQLA+E Sbjct: 412 KTQEQLALE 420>XP_005262326 Length = 578 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 RTREQLAVE 9 +T+EQLA+E Sbjct: 413 KTQEQLALE 421>NP_037379 Length = 458 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RTREQLAVE 9 RT+ QLAV+ Sbjct: 432 RTQSQLAVQ 440>NP_659540 Length = 361 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RTREQLAVE 9 RT+ QLAV+ Sbjct: 335 RTQSQLAVQ 343>NP_653321 Length = 626 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RTREQLAVE 9 RTREQL + Sbjct: 520 RTREQLQAD 528>NP_001092903 Length = 831 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RTREQLAVE 9 RTREQL + Sbjct: 520 RTREQLQAD 528>NP_065885 Length = 550 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RTREQLAV 8 +T+EQLA+ Sbjct: 363 KTKEQLAI 370>NP_001098991 Length = 844 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RTREQLAVE 9 +TREQL E Sbjct: 534 KTREQLQAE 542>XP_006717843 Length = 844 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RTREQLAVE 9 +TREQL E Sbjct: 534 KTREQLQAE 542>XP_005252734 Length = 846 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RTREQLAVE 9 +TREQL E Sbjct: 534 KTREQLQAE 542>XP_005252733 Length = 916 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RTREQLAVE 9 +TREQL E Sbjct: 460 KTREQLQAE 468>XP_005252732 Length = 976 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RTREQLAVE 9 +TREQL E Sbjct: 534 KTREQLQAE 542>XP_005252731 Length = 988 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RTREQLAVE 9 +TREQL E Sbjct: 534 KTREQLQAE 542>XP_005252730 Length = 990 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RTREQLAVE 9 +TREQL E Sbjct: 534 KTREQLQAE 542>XP_005252729 Length = 990 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RTREQLAVE 9 +TREQL E Sbjct: 534 KTREQLQAE 542>XP_005264323 Length = 426 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RTREQLAVE 9 RT+ QLAV+ Sbjct: 400 RTQSQLAVQ 408>NP_001139784 Length = 986 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RTREQLA 7 RT+EQLA Sbjct: 28 RTQEQLA 34>NP_705832 Length = 938 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RTREQLA 7 RT+EQLA Sbjct: 28 RTQEQLA 34>NP_054767 Length = 1049 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RTREQL 6 RTREQL Sbjct: 61 RTREQL 66>XP_005256920 Length = 943 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RTREQLA 7 RT+EQLA Sbjct: 28 RTQEQLA 34>XP_006720977 Length = 1049 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RTREQL 6 RTREQL Sbjct: 61 RTREQL 66>XP_006720976 Length = 1053 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RTREQL 6 RTREQL Sbjct: 61 RTREQL 66>XP_006720975 Length = 1070 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RTREQL 6 RTREQL Sbjct: 32 RTREQL 37>XP_005255512 Length = 1088 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RTREQL 6 RTREQL Sbjct: 50 RTREQL 55>XP_006720974 Length = 1099 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RTREQL 6 RTREQL Sbjct: 61 RTREQL 66>XP_005255510 Length = 1099 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RTREQL 6 RTREQL Sbjct: 61 RTREQL 66>XP_006720973 Length = 1099 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RTREQL 6 RTREQL Sbjct: 61 RTREQL 66>XP_006720972 Length = 1099 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RTREQL 6 RTREQL Sbjct: 61 RTREQL 66>XP_006720971 Length = 1099 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RTREQL 6 RTREQL Sbjct: 61 RTREQL 66>XP_005255508 Length = 1099 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RTREQL 6 RTREQL Sbjct: 61 RTREQL 66>XP_005255509 Length = 1099 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RTREQL 6 RTREQL Sbjct: 61 RTREQL 66>NP_776248 Length = 257 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TREQLA 7 TREQLA Sbjct: 189 TREQLA 194>NP_009117 Length = 2442 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RTREQLAVE 9 R E+LAVE Sbjct: 1870 RLEEELAVE 1878>NP_055986 Length = 1125 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TREQLA 7 TREQLA Sbjct: 870 TREQLA 875>NP_065905 Length = 1216 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TREQLAV 8 +REQLAV Sbjct: 803 SREQLAV 809>NP_001257869 Length = 1111 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TREQLA 7 TREQLA Sbjct: 856 TREQLA 861>XP_005260322 Length = 1810 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RTREQLAVE 9 R E+LAVE Sbjct: 1238 RLEEELAVE 1246>XP_005260321 Length = 2365 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RTREQLAVE 9 R E+LAVE Sbjct: 1793 RLEEELAVE 1801>XP_005260320 Length = 2370 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RTREQLAVE 9 R E+LAVE Sbjct: 1870 RLEEELAVE 1878>XP_006723758 Length = 2386 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RTREQLAVE 9 R E+LAVE Sbjct: 1814 RLEEELAVE 1822>XP_006723757 Length = 2404 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RTREQLAVE 9 R E+LAVE Sbjct: 1870 RLEEELAVE 1878>XP_006723756 Length = 2442 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RTREQLAVE 9 R E+LAVE Sbjct: 1870 RLEEELAVE 1878>XP_006723755 Length = 2442 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RTREQLAVE 9 R E+LAVE Sbjct: 1870 RLEEELAVE 1878>XP_006723754 Length = 2442 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RTREQLAVE 9 R E+LAVE Sbjct: 1870 RLEEELAVE 1878>XP_006723753 Length = 2442 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RTREQLAVE 9 R E+LAVE Sbjct: 1870 RLEEELAVE 1878>XP_005260319 Length = 2442 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RTREQLAVE 9 R E+LAVE Sbjct: 1870 RLEEELAVE 1878>XP_006722578 Length = 860 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TREQLAV 8 +REQLAV Sbjct: 447 SREQLAV 453>XP_005266789 Length = 999 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TREQLAV 8 +REQLAV Sbjct: 803 SREQLAV 809>XP_006722577 Length = 1043 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TREQLAV 8 +REQLAV Sbjct: 803 SREQLAV 809>XP_006722576 Length = 1087 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TREQLAV 8 +REQLAV Sbjct: 803 SREQLAV 809>XP_005266788 Length = 1192 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TREQLAV 8 +REQLAV Sbjct: 779 SREQLAV 785>XP_005266787 Length = 1216 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TREQLAV 8 +REQLAV Sbjct: 803 SREQLAV 809>XP_005255257 Length = 774 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TREQLA 7 TREQLA Sbjct: 519 TREQLA 524>XP_005255256 Length = 780 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TREQLA 7 TREQLA Sbjct: 525 TREQLA 530>XP_005255255 Length = 951 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TREQLA 7 TREQLA Sbjct: 696 TREQLA 701>XP_005255254 Length = 1051 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TREQLA 7 TREQLA Sbjct: 796 TREQLA 801>XP_005255252 Length = 1124 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TREQLA 7 TREQLA Sbjct: 869 TREQLA 874Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.313 0.123 0.290 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 398,228 Number of extensions: 507 Number of successful extensions: 62 Number of sequences better than 10000.0: 62 Number of HSP's gapped: 62 Number of HSP's successfully gapped: 62 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |