Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001185761 20 509 NP_055459 20 509 XP_006726410 20 509 XP_006711719 20 509 XP_006711716 20 509 XP_005273038 20 509 XP_006711164 20 509 NP_001245330 16 5631 NP_003300 16 5631 NP_001035049 16 5631 NP_001245331 16 5631 NP_001245332 16 5631 NP_001254544 16 5631 XP_006719764 16 5631 XP_006719763 16 5631 NP_001003937 16 5631 NP_000101 16 7355 NP_001153773 16 7355 NP_996611 16 7355 NP_001120727 16 7355 NP_631915 16 7355 NP_003310 16 7355 NP_597676 16 7355 NP_001243779 16 7355 NP_596869 16 7355 XP_006726255 16 7355 XP_006726254 16 7355 XP_006726253 16 7355 XP_006726252 16 7355 XP_006726215 16 7355 XP_006726214 16 7355 XP_006726213 16 7355 XP_006726212 16 7355 XP_006726371 16 7355 XP_006726370 16 7355 XP_006726117 16 7355 XP_006726116 16 7355 XP_006726115 16 7355 XP_006726114 16 7355 XP_006726018 16 7355 XP_006726017 16 7355 XP_006726016 16 7355 XP_006726015 16 7355 XP_006725930 16 7355 XP_006725929 16 7355 XP_006725928 16 7355 XP_006725927 16 7355 XP_006725829 16 7355 XP_006725828 16 7355 XP_006725827 16 7355 XP_006725826 16 7355 XP_006725703 16 7355 XP_006725702 16 7355 XP_006725701 16 7355 XP_006725700 16 7355 XP_006725699 16 7355 XP_006726335 16 7355 XP_006726334 16 7355 XP_006726333 16 7355 XP_006726332 16 7355 XP_006723140 16 7355 XP_006723139 16 7355 XP_006723138 16 7355 XP_006723137 16 7355 XP_005246888 16 7355 XP_006712788 16 7355 XP_006712787 16 7355 XP_006712786 16 7355 XP_006710460 16 7355 XP_005270619 16 7355 NP_001254479 16 7355 NP_597681 16 7355 NP_079160 15 9605 NP_079199 15 9605 XP_005268134 15 9605 XP_005268132 15 9605>NP_001185761 Length = 2240 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RTNLEVKSV 9 RTNLEVKS+ Sbjct: 2223 RTNLEVKSL 2231>NP_055459 Length = 2346 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RTNLEVKSV 9 RTNLEVKS+ Sbjct: 2329 RTNLEVKSL 2337>XP_006726410 Length = 2087 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RTNLEVKSV 9 RTNLEVKS+ Sbjct: 2070 RTNLEVKSL 2078>XP_006711719 Length = 2302 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RTNLEVKSV 9 RTNLEVKS+ Sbjct: 2285 RTNLEVKSL 2293>XP_006711716 Length = 2411 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RTNLEVKSV 9 RTNLEVKS+ Sbjct: 2394 RTNLEVKSL 2402>XP_005273038 Length = 2509 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RTNLEVKSV 9 RTNLEVKS+ Sbjct: 2492 RTNLEVKSL 2500>XP_006711164 Length = 2087 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RTNLEVKSV 9 RTNLEVKS+ Sbjct: 2070 RTNLEVKSL 2078>NP_001245330 Length = 1040 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TNLEVKS 8 TNLEVK+ Sbjct: 213 TNLEVKN 219>NP_003300 Length = 437 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TNLEVKSV 9 TNLEVK + Sbjct: 305 TNLEVKEL 312>NP_001035049 Length = 1093 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TNLEVKS 8 TNLEVK+ Sbjct: 266 TNLEVKN 272>NP_001245331 Length = 691 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TNLEVKS 8 TNLEVK+ Sbjct: 266 TNLEVKN 272>NP_001245332 Length = 747 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TNLEVKS 8 TNLEVK+ Sbjct: 213 TNLEVKN 219>NP_001254544 Length = 638 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TNLEVKS 8 TNLEVK+ Sbjct: 213 TNLEVKN 219>XP_006719764 Length = 634 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TNLEVKS 8 TNLEVK+ Sbjct: 266 TNLEVKN 272>XP_006719763 Length = 800 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TNLEVKS 8 TNLEVK+ Sbjct: 266 TNLEVKN 272>NP_001003937 Length = 410 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TNLEVKSV 9 TNLEVK + Sbjct: 278 TNLEVKEL 285>NP_000101 Length = 1025 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TNLEVKS 8 TNL++KS Sbjct: 93 TNLDIKS 99>NP_001153773 Length = 173 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TNLEVKS 8 TNL++KS Sbjct: 93 TNLDIKS 99>NP_996611 Length = 980 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TNLEVKSV 9 TNLE+K + Sbjct: 943 TNLEIKKL 950>NP_001120727 Length = 1037 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TNLEVKSV 9 TNLE+K + Sbjct: 1000 TNLEIKKL 1007>NP_631915 Length = 1009 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TNLEVKSV 9 TNLE+K + Sbjct: 972 TNLEIKKL 979>NP_003310 Length = 26926 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RTNLEVK 7 RT+LEVK Sbjct: 8189 RTSLEVK 8195>NP_597676 Length = 27051 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RTNLEVK 7 RT+LEVK Sbjct: 8314 RTSLEVK 8320>NP_001243779 Length = 34350 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RTNLEVK 7 RT+LEVK Sbjct: 15613 RTSLEVK 15619>NP_596869 Length = 33423 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RTNLEVK 7 RT+LEVK Sbjct: 14686 RTSLEVK 14692>XP_006726255 Length = 1007 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TNLEVKSV 9 TNLE+K + Sbjct: 970 TNLEIKKL 977>XP_006726254 Length = 1037 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TNLEVKSV 9 TNLE+K + Sbjct: 1000 TNLEIKKL 1007>XP_006726253 Length = 1037 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TNLEVKSV 9 TNLE+K + Sbjct: 1000 TNLEIKKL 1007>XP_006726252 Length = 1064 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TNLEVKSV 9 TNLE+K + Sbjct: 1027 TNLEIKKL 1034>XP_006726215 Length = 1007 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TNLEVKSV 9 TNLE+K + Sbjct: 970 TNLEIKKL 977>XP_006726214 Length = 1037 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TNLEVKSV 9 TNLE+K + Sbjct: 1000 TNLEIKKL 1007>XP_006726213 Length = 1037 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TNLEVKSV 9 TNLE+K + Sbjct: 1000 TNLEIKKL 1007>XP_006726212 Length = 1064 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TNLEVKSV 9 TNLE+K + Sbjct: 1027 TNLEIKKL 1034>XP_006726371 Length = 1037 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TNLEVKSV 9 TNLE+K + Sbjct: 1000 TNLEIKKL 1007>XP_006726370 Length = 1037 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TNLEVKSV 9 TNLE+K + Sbjct: 1000 TNLEIKKL 1007>XP_006726117 Length = 1007 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TNLEVKSV 9 TNLE+K + Sbjct: 970 TNLEIKKL 977>XP_006726116 Length = 1037 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TNLEVKSV 9 TNLE+K + Sbjct: 1000 TNLEIKKL 1007>XP_006726115 Length = 1037 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TNLEVKSV 9 TNLE+K + Sbjct: 1000 TNLEIKKL 1007>XP_006726114 Length = 1064 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TNLEVKSV 9 TNLE+K + Sbjct: 1027 TNLEIKKL 1034>XP_006726018 Length = 1007 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TNLEVKSV 9 TNLE+K + Sbjct: 970 TNLEIKKL 977>XP_006726017 Length = 1037 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TNLEVKSV 9 TNLE+K + Sbjct: 1000 TNLEIKKL 1007>XP_006726016 Length = 1037 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TNLEVKSV 9 TNLE+K + Sbjct: 1000 TNLEIKKL 1007>XP_006726015 Length = 1064 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TNLEVKSV 9 TNLE+K + Sbjct: 1027 TNLEIKKL 1034>XP_006725930 Length = 1007 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TNLEVKSV 9 TNLE+K + Sbjct: 970 TNLEIKKL 977>XP_006725929 Length = 1037 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TNLEVKSV 9 TNLE+K + Sbjct: 1000 TNLEIKKL 1007>XP_006725928 Length = 1037 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TNLEVKSV 9 TNLE+K + Sbjct: 1000 TNLEIKKL 1007>XP_006725927 Length = 1064 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TNLEVKSV 9 TNLE+K + Sbjct: 1027 TNLEIKKL 1034>XP_006725829 Length = 1007 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TNLEVKSV 9 TNLE+K + Sbjct: 970 TNLEIKKL 977>XP_006725828 Length = 1037 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TNLEVKSV 9 TNLE+K + Sbjct: 1000 TNLEIKKL 1007>XP_006725827 Length = 1037 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TNLEVKSV 9 TNLE+K + Sbjct: 1000 TNLEIKKL 1007>XP_006725826 Length = 1064 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TNLEVKSV 9 TNLE+K + Sbjct: 1027 TNLEIKKL 1034>XP_006725703 Length = 980 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TNLEVKSV 9 TNLE+K + Sbjct: 943 TNLEIKKL 950>XP_006725702 Length = 1007 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TNLEVKSV 9 TNLE+K + Sbjct: 970 TNLEIKKL 977>XP_006725701 Length = 1037 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TNLEVKSV 9 TNLE+K + Sbjct: 1000 TNLEIKKL 1007>XP_006725700 Length = 1037 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TNLEVKSV 9 TNLE+K + Sbjct: 1000 TNLEIKKL 1007>XP_006725699 Length = 1064 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TNLEVKSV 9 TNLE+K + Sbjct: 1027 TNLEIKKL 1034>XP_006726335 Length = 1007 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TNLEVKSV 9 TNLE+K + Sbjct: 970 TNLEIKKL 977>XP_006726334 Length = 1037 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TNLEVKSV 9 TNLE+K + Sbjct: 1000 TNLEIKKL 1007>XP_006726333 Length = 1037 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TNLEVKSV 9 TNLE+K + Sbjct: 1000 TNLEIKKL 1007>XP_006726332 Length = 1064 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TNLEVKSV 9 TNLE+K + Sbjct: 1027 TNLEIKKL 1034>XP_006723140 Length = 1007 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TNLEVKSV 9 TNLE+K + Sbjct: 970 TNLEIKKL 977>XP_006723139 Length = 1037 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TNLEVKSV 9 TNLE+K + Sbjct: 1000 TNLEIKKL 1007>XP_006723138 Length = 1037 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TNLEVKSV 9 TNLE+K + Sbjct: 1000 TNLEIKKL 1007>XP_006723137 Length = 1064 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TNLEVKSV 9 TNLE+K + Sbjct: 1027 TNLEIKKL 1034>XP_005246888 Length = 22663 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RTNLEVK 7 RT+LEVK Sbjct: 3926 RTSLEVK 3932>XP_006712788 Length = 24022 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RTNLEVK 7 RT+LEVK Sbjct: 5285 RTSLEVK 5291>XP_006712787 Length = 33978 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RTNLEVK 7 RT+LEVK Sbjct: 15241 RTSLEVK 15247>XP_006712786 Length = 35484 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RTNLEVK 7 RT+LEVK Sbjct: 16747 RTSLEVK 16753>XP_006710460 Length = 889 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TNLEVKS 8 TNL++KS Sbjct: 93 TNLDIKS 99>XP_005270619 Length = 953 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TNLEVKS 8 TNL++KS Sbjct: 93 TNLDIKS 99>NP_001254479 Length = 35991 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RTNLEVK 7 RT+LEVK Sbjct: 17254 RTSLEVK 17260>NP_597681 Length = 27118 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RTNLEVK 7 RT+LEVK Sbjct: 8381 RTSLEVK 8387>NP_079160 Length = 463 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TNLEVKSV 9 TN EVK + Sbjct: 215 TNFEVKGI 222>NP_079199 Length = 1887 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 NLEVKS 8 NLEVKS Sbjct: 1720 NLEVKS 1725>XP_005268134 Length = 281 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TNLEVKSV 9 TN EVK + Sbjct: 33 TNFEVKGI 40>XP_005268132 Length = 463 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TNLEVKSV 9 TN EVK + Sbjct: 215 TNFEVKGI 222Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.305 0.120 0.281 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 308,637 Number of extensions: 394 Number of successful extensions: 76 Number of sequences better than 10000.0: 76 Number of HSP's gapped: 76 Number of HSP's successfully gapped: 76 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |