Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004295 18 1135 NP_997719 17 2528 NP_002221 16 5631 NP_001895 16 5631 NP_001091680 16 5631 NP_068831 16 5631 NP_001091679 16 5631 NP_001158157 16 5631 XP_006721941 16 5631 XP_006721940 16 5631 XP_006721939 16 5631 XP_006721938 16 5631 XP_006721937 16 5631 XP_006721936 16 5631 XP_006721935 16 5631 XP_006721934 16 5631 XP_005257370 16 5631 XP_006713048 16 5631 XP_006713047 16 5631 XP_006713046 16 5631 XP_005264943 16 5631 NP_001010923 16 5631 NP_001159451 16 7355 XP_006717953 16 7355 NP_001123537 15 9605 NP_004136 15 9605 XP_006722821 15 9605 XP_006722820 15 9605 XP_005259972 15 9605 XP_006722819 15 9605 XP_006722818 15 9605>NP_004295 Length = 1620 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 RTLSRVLK 8 RTLSRVLK Sbjct: 121 RTLSRVLK 128>NP_997719 Length = 291 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 RTLSRVLKV 9 ++LSRVLKV Sbjct: 175 KSLSRVLKV 183>NP_002221 Length = 745 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 TLSRVLKV 9 T SRVLKV Sbjct: 330 TTSRVLKV 337>NP_001895 Length = 781 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 TLSRVLKV 9 T SRVLKV Sbjct: 339 TTSRVLKV 346>NP_001091680 Length = 781 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 TLSRVLKV 9 T SRVLKV Sbjct: 339 TTSRVLKV 346>NP_068831 Length = 745 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 TLSRVLKV 9 T SRVLKV Sbjct: 330 TTSRVLKV 337>NP_001091679 Length = 781 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 TLSRVLKV 9 T SRVLKV Sbjct: 339 TTSRVLKV 346>NP_001158157 Length = 680 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RTLSRVLKV 9 RTL RVL++ Sbjct: 15 RTLPRVLEI 23>XP_006721941 Length = 745 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 TLSRVLKV 9 T SRVLKV Sbjct: 330 TTSRVLKV 337>XP_006721940 Length = 745 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 TLSRVLKV 9 T SRVLKV Sbjct: 330 TTSRVLKV 337>XP_006721939 Length = 745 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 TLSRVLKV 9 T SRVLKV Sbjct: 330 TTSRVLKV 337>XP_006721938 Length = 745 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 TLSRVLKV 9 T SRVLKV Sbjct: 330 TTSRVLKV 337>XP_006721937 Length = 745 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 TLSRVLKV 9 T SRVLKV Sbjct: 330 TTSRVLKV 337>XP_006721936 Length = 745 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 TLSRVLKV 9 T SRVLKV Sbjct: 330 TTSRVLKV 337>XP_006721935 Length = 762 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 TLSRVLKV 9 T SRVLKV Sbjct: 347 TTSRVLKV 354>XP_006721934 Length = 783 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 TLSRVLKV 9 T SRVLKV Sbjct: 368 TTSRVLKV 375>XP_005257370 Length = 783 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 TLSRVLKV 9 T SRVLKV Sbjct: 368 TTSRVLKV 375>XP_006713048 Length = 720 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 TLSRVLKV 9 T SRVLKV Sbjct: 339 TTSRVLKV 346>XP_006713047 Length = 774 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 TLSRVLKV 9 T SRVLKV Sbjct: 332 TTSRVLKV 339>XP_006713046 Length = 774 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 TLSRVLKV 9 T SRVLKV Sbjct: 332 TTSRVLKV 339>XP_005264943 Length = 781 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 TLSRVLKV 9 T SRVLKV Sbjct: 339 TTSRVLKV 346>NP_001010923 Length = 641 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RTLSRVLKV 9 RTL RVL++ Sbjct: 15 RTLPRVLEI 23>NP_001159451 Length = 1994 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 TLSRVLKV 9 TLS VLKV Sbjct: 59 TLSAVLKV 66>XP_006717953 Length = 2008 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 TLSRVLKV 9 TLS VLKV Sbjct: 59 TLSAVLKV 66>NP_001123537 Length = 2022 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 TLSRVLKV 9 TLS++LKV Sbjct: 437 TLSQLLKV 444>NP_004136 Length = 2157 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 TLSRVLKV 9 TLS++LKV Sbjct: 437 TLSQLLKV 444>XP_006722821 Length = 1462 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 TLSRVLKV 9 TLS++LKV Sbjct: 437 TLSQLLKV 444>XP_006722820 Length = 2140 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 TLSRVLKV 9 TLS++LKV Sbjct: 437 TLSQLLKV 444>XP_005259972 Length = 2141 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 TLSRVLKV 9 TLS++LKV Sbjct: 437 TLSQLLKV 444>XP_006722819 Length = 2156 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 TLSRVLKV 9 TLS++LKV Sbjct: 437 TLSQLLKV 444>XP_006722818 Length = 2157 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 TLSRVLKV 9 TLS++LKV Sbjct: 437 TLSQLLKV 444Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.332 0.138 0.331 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 247,642 Number of extensions: 407 Number of successful extensions: 31 Number of sequences better than 10000.0: 31 Number of HSP's gapped: 31 Number of HSP's successfully gapped: 31 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |