Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001180451 19 665 NP_001180453 19 665 NP_001180452 19 665 NP_078795 19 665 XP_006721333 19 665 XP_006721332 19 665 NP_005179 18 1482 NP_004360 16 5631 NP_008958 16 5631 NP_001230352 16 5631 XP_005246122 16 5631 XP_006712316 16 5631 NP_055309 16 7355 NP_110445 16 7355 XP_006722977 16 7355 XP_005260143 16 7355 XP_005260145 16 7355 XP_005260142 16 7355 XP_005260144 16 7355 XP_006721103 16 7355 XP_005255314 16 7355 XP_006721102 16 7355 XP_005255313 16 7355 XP_005255312 16 7355 XP_006721101 16 7355 XP_005255311 16 7355 XP_005255310 16 7355 XP_005246782 16 7355 XP_005246780 16 7355 XP_005246776 16 7355 XP_006712723 16 7355 XP_006712722 16 7355 XP_005246775 16 7355 NP_001276090 15 9605 NP_001276089 15 9605 NP_005922 15 9605 NP_059138 15 9605 NP_065769 15 9605 NP_055816 15 9605 NP_057683 15 9605 NP_150229 15 9605 NP_001257309 15 9605 NP_061862 15 9605 NP_892014 15 9605 NP_001257310 15 9605 XP_006726158 15 9605 XP_006726065 15 9605 XP_005255915 15 9605 XP_006718498 15 9605 XP_005273831 15 9605 XP_005273830 15 9605 XP_005273828 15 9605 XP_006718495 15 9605 XP_005273827 15 9605 XP_005273826 15 9605 XP_005273825 15 9605 XP_005273824 15 9605 XP_005273823 15 9605 XP_005273822 15 9605 XP_005268525 15 9605 XP_005268524 15 9605 XP_006714850 15 9605 XP_005268523 15 9605 XP_006714297 15 9605 XP_005270973 15 9605 XP_005270971 15 9605 XP_005270970 15 9605>NP_001180451 Length = 1223 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RTLSHISNA 9 RTLSHIS A Sbjct: 450 RTLSHISEA 458>NP_001180453 Length = 1233 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RTLSHISNA 9 RTLSHIS A Sbjct: 460 RTLSHISEA 468>NP_001180452 Length = 1239 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RTLSHISNA 9 RTLSHIS A Sbjct: 466 RTLSHISEA 474>NP_078795 Length = 1219 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RTLSHISNA 9 RTLSHIS A Sbjct: 446 RTLSHISEA 454>XP_006721333 Length = 1238 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RTLSHISNA 9 RTLSHIS A Sbjct: 466 RTLSHISEA 474>XP_006721332 Length = 1239 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RTLSHISNA 9 RTLSHIS A Sbjct: 466 RTLSHISEA 474>NP_005179 Length = 906 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RTLSHISNA 9 RTLS ISNA Sbjct: 788 RTLSDISNA 796>NP_004360 Length = 3177 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LSHISN 8 LSHISN Sbjct: 103 LSHISN 108>NP_008958 Length = 1522 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RTLSHISN 8 RTLS +SN Sbjct: 309 RTLSDVSN 316>NP_001230352 Length = 70 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TLSHISNA 9 T++HISN+ Sbjct: 52 TVAHISNS 59>XP_005246122 Length = 2977 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LSHISN 8 LSHISN Sbjct: 103 LSHISN 108>XP_006712316 Length = 3010 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LSHISN 8 LSHISN Sbjct: 103 LSHISN 108>NP_055309 Length = 1962 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TLSHISN 8 +LSH+SN Sbjct: 503 SLSHLSN 509>NP_110445 Length = 396 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TLSHISNA 9 TLSHI A Sbjct: 165 TLSHIQEA 172>XP_006722977 Length = 396 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TLSHISNA 9 TLSHI A Sbjct: 165 TLSHIQEA 172>XP_005260143 Length = 396 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TLSHISNA 9 TLSHI A Sbjct: 165 TLSHIQEA 172>XP_005260145 Length = 396 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TLSHISNA 9 TLSHI A Sbjct: 165 TLSHIQEA 172>XP_005260142 Length = 396 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TLSHISNA 9 TLSHI A Sbjct: 165 TLSHIQEA 172>XP_005260144 Length = 396 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TLSHISNA 9 TLSHI A Sbjct: 165 TLSHIQEA 172>XP_006721103 Length = 1597 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TLSHISN 8 +LSH+SN Sbjct: 471 SLSHLSN 477>XP_005255314 Length = 1709 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TLSHISN 8 +LSH+SN Sbjct: 250 SLSHLSN 256>XP_006721102 Length = 1820 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TLSHISN 8 +LSH+SN Sbjct: 361 SLSHLSN 367>XP_005255313 Length = 1822 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TLSHISN 8 +LSH+SN Sbjct: 471 SLSHLSN 477>XP_005255312 Length = 1871 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TLSHISN 8 +LSH+SN Sbjct: 471 SLSHLSN 477>XP_006721101 Length = 1907 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TLSHISN 8 +LSH+SN Sbjct: 471 SLSHLSN 477>XP_005255311 Length = 1913 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TLSHISN 8 +LSH+SN Sbjct: 503 SLSHLSN 509>XP_005255310 Length = 1919 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TLSHISN 8 +LSH+SN Sbjct: 471 SLSHLSN 477>XP_005246782 Length = 732 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RTLSHIS 7 RTLSH++ Sbjct: 691 RTLSHLA 697>XP_005246780 Length = 958 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RTLSHIS 7 RTLSH++ Sbjct: 917 RTLSHLA 923>XP_005246776 Length = 980 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RTLSHIS 7 RTLSH++ Sbjct: 939 RTLSHLA 945>XP_006712723 Length = 980 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RTLSHIS 7 RTLSH++ Sbjct: 939 RTLSHLA 945>XP_006712722 Length = 980 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RTLSHIS 7 RTLSH++ Sbjct: 939 RTLSHLA 945>XP_005246775 Length = 980 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RTLSHIS 7 RTLSH++ Sbjct: 939 RTLSHLA 945>NP_001276090 Length = 340 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RTLSHISN 8 RTL+HI + Sbjct: 98 RTLTHIKD 105>NP_001276089 Length = 351 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RTLSHISN 8 RTL+HI + Sbjct: 66 RTLTHIKD 73>NP_005922 Length = 383 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RTLSHISN 8 RTL+HI + Sbjct: 98 RTLTHIKD 105>NP_059138 Length = 1032 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RTLSHISNA 9 RTL H+S A Sbjct: 575 RTLRHLSLA 583>NP_065769 Length = 1352 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TLSHISN 8 TLSH+S+ Sbjct: 74 TLSHLSS 80>NP_055816 Length = 3664 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RTLSHISNA 9 RT+SH++ A Sbjct: 3011 RTVSHLAAA 3019>NP_057683 Length = 264 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 LSHISN 8 LSH+SN Sbjct: 47 LSHLSN 52>NP_150229 Length = 1359 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RTLSHIS 7 +TL+HIS Sbjct: 210 KTLTHIS 216>NP_001257309 Length = 598 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TLSHISN 8 TLSH+S+ Sbjct: 450 TLSHLSD 456>NP_061862 Length = 1060 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RTLSHIS 7 +TLSH+S Sbjct: 693 QTLSHLS 699>NP_892014 Length = 792 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TLSHISN 8 TLSH+S+ Sbjct: 537 TLSHLSD 543>NP_001257310 Length = 517 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TLSHISN 8 TLSH+S+ Sbjct: 262 TLSHLSD 268>XP_006726158 Length = 351 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RTLSHISN 8 RTL+HI + Sbjct: 66 RTLTHIKD 73>XP_006726065 Length = 351 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RTLSHISN 8 RTL+HI + Sbjct: 66 RTLTHIKD 73>XP_005255915 Length = 1099 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RTLSHISN 8 RTL+HI + Sbjct: 107 RTLTHIDS 114>XP_006718498 Length = 388 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TLSHISN 8 TLSH+S+ Sbjct: 133 TLSHLSD 139>XP_005273831 Length = 415 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TLSHISN 8 TLSH+S+ Sbjct: 160 TLSHLSD 166>XP_005273830 Length = 559 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TLSHISN 8 TLSH+S+ Sbjct: 304 TLSHLSD 310>XP_005273828 Length = 559 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TLSHISN 8 TLSH+S+ Sbjct: 304 TLSHLSD 310>XP_006718495 Length = 606 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TLSHISN 8 TLSH+S+ Sbjct: 458 TLSHLSD 464>XP_005273827 Length = 559 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TLSHISN 8 TLSH+S+ Sbjct: 304 TLSHLSD 310>XP_005273826 Length = 688 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TLSHISN 8 TLSH+S+ Sbjct: 433 TLSHLSD 439>XP_005273825 Length = 693 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TLSHISN 8 TLSH+S+ Sbjct: 545 TLSHLSD 551>XP_005273824 Length = 713 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TLSHISN 8 TLSH+S+ Sbjct: 458 TLSHLSD 464>XP_005273823 Length = 758 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TLSHISN 8 TLSH+S+ Sbjct: 503 TLSHLSD 509>XP_005273822 Length = 800 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TLSHISN 8 TLSH+S+ Sbjct: 545 TLSHLSD 551>XP_005268525 Length = 1005 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RTLSHIS 7 +TLSH+S Sbjct: 638 QTLSHLS 644>XP_005268524 Length = 1006 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RTLSHIS 7 +TLSH+S Sbjct: 639 QTLSHLS 645>XP_006714850 Length = 1049 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RTLSHIS 7 +TLSH+S Sbjct: 682 QTLSHLS 688>XP_005268523 Length = 1061 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RTLSHIS 7 +TLSH+S Sbjct: 694 QTLSHLS 700>XP_006714297 Length = 195 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 LSHISN 8 LSH+SN Sbjct: 47 LSHLSN 52>XP_005270973 Length = 350 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 LSHISN 8 +SHISN Sbjct: 312 ISHISN 317>XP_005270971 Length = 395 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 LSHISN 8 +SHISN Sbjct: 357 ISHISN 362>XP_005270970 Length = 420 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 LSHISN 8 +SHISN Sbjct: 382 ISHISN 387Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.314 0.116 0.305 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 549,559 Number of extensions: 745 Number of successful extensions: 67 Number of sequences better than 10000.0: 67 Number of HSP's gapped: 67 Number of HSP's successfully gapped: 67 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |