Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000305 19 665 XP_006717990 19 665 XP_006717989 19 665 NP_001269607 16 5631 NP_001269606 16 5631 NP_000457 16 5631 NP_000444 16 5631 NP_666018 16 5631 NP_078863 16 5631 NP_848593 16 5631 XP_006718220 16 5631 XP_006718219 16 5631 XP_006718218 16 5631 XP_005250490 16 5631 XP_005250486 16 5631 XP_005271253 16 5631 XP_005271252 16 5631 XP_005271251 16 5631 NP_877950 16 7355 NP_689616 16 7355 NP_001192230 16 7355 XP_006714503 16 7355 NP_001135938 16 7355 NP_597700 16 7355 NP_001165881 15 9605 NP_001165828 15 9605 NP_001416 15 9605 NP_003009 15 9605 NP_008835 15 9605 NP_001075109 15 9605 NP_001074295 15 9605 NP_620598 15 9605 NP_079052 15 9605 NP_620599 15 9605 NP_004348 15 9605 NP_001034579 15 9605 NP_055826 15 9605 NP_001185879 15 9605 NP_443188 15 9605 NP_937822 15 9605 XP_006721081 15 9605 XP_005255143 15 9605 XP_006721080 15 9605 XP_006721079 15 9605 XP_005255141 15 9605 XP_005254732 15 9605 XP_005254731 15 9605 XP_006720754 15 9605 XP_005254729 15 9605 XP_005254730 15 9605 XP_005254728 15 9605 XP_005254727 15 9605 XP_006716443 15 9605 XP_006716442 15 9605 XP_005273655 15 9605 XP_005272427 15 9605 XP_005272426 15 9605>NP_000305 Length = 403 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RTGVMIYAY 9 RTGVMI AY Sbjct: 130 RTGVMICAY 138>XP_006717990 Length = 175 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RTGVMIYAY 9 RTGVMI AY Sbjct: 115 RTGVMICAY 123>XP_006717989 Length = 388 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RTGVMIYAY 9 RTGVMI AY Sbjct: 115 RTGVMICAY 123>NP_001269607 Length = 1075 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 RTGVMIY 7 RTG+++Y Sbjct: 666 RTGILLY 672>NP_001269606 Length = 1226 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 RTGVMIY 7 RTG+++Y Sbjct: 817 RTGILLY 823>NP_000457 Length = 1283 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 RTGVMIY 7 RTG+++Y Sbjct: 874 RTGILLY 880>NP_000444 Length = 643 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TGVMIYA 8 TG++IYA Sbjct: 145 TGIVIYA 151>NP_666018 Length = 610 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TGVMIYA 8 TG++IYA Sbjct: 143 TGIVIYA 149>NP_078863 Length = 277 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GVMIYAY 9 GVM+Y Y Sbjct: 116 GVMLYRY 122>NP_848593 Length = 618 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TGVMIYA 8 TGV++YA Sbjct: 139 TGVVVYA 145>XP_006718220 Length = 391 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TGVMIYA 8 TGV++YA Sbjct: 139 TGVVVYA 145>XP_006718219 Length = 417 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TGVMIYA 8 TGV++YA Sbjct: 139 TGVVVYA 145>XP_006718218 Length = 507 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TGVMIYA 8 TGV++YA Sbjct: 28 TGVVVYA 34>XP_005250490 Length = 700 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 RTGVMIY 7 RTG+++Y Sbjct: 291 RTGILLY 297>XP_005250486 Length = 1243 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 RTGVMIY 7 RTG+++Y Sbjct: 834 RTGILLY 840>XP_005271253 Length = 204 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GVMIYAY 9 GVM+Y Y Sbjct: 43 GVMLYRY 49>XP_005271252 Length = 246 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GVMIYAY 9 GVM+Y Y Sbjct: 85 GVMLYRY 91>XP_005271251 Length = 247 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GVMIYAY 9 GVM+Y Y Sbjct: 86 GVMLYRY 92>NP_877950 Length = 775 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 GVMIYAY 9 GV++Y+Y Sbjct: 414 GVLLYSY 420>NP_689616 Length = 1009 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 GVMIYAY 9 GV++Y+Y Sbjct: 648 GVLLYSY 654>NP_001192230 Length = 1017 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 GVMIYAY 9 GV++Y+Y Sbjct: 648 GVLLYSY 654>XP_006714503 Length = 848 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 GVMIYAY 9 GV++Y+Y Sbjct: 648 GVLLYSY 654>NP_001135938 Length = 423 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RTGVMI 6 RTGVMI Sbjct: 106 RTGVMI 111>NP_597700 Length = 523 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RTGVMI 6 RTGVMI Sbjct: 206 RTGVMI 211>NP_001165881 Length = 197 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 TGVMIYAY 9 TG+++Y Y Sbjct: 99 TGLVVYDY 106>NP_001165828 Length = 191 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 TGVMIYAY 9 TG+++Y Y Sbjct: 99 TGLVVYDY 106>NP_001416 Length = 163 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 TGVMIYA 8 TG +IYA Sbjct: 113 TGALIYA 119>NP_003009 Length = 197 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 TGVMIYAY 9 TG+++Y Y Sbjct: 99 TGLVVYDY 106>NP_008835 Length = 4128 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TGVMIYAY 9 TGV Y+Y Sbjct: 2047 TGVQSYSY 2054>NP_001075109 Length = 4097 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TGVMIYAY 9 TGV Y+Y Sbjct: 2047 TGVQSYSY 2054>NP_001074295 Length = 1406 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 RTGVMIY 7 +TG++IY Sbjct: 1256 QTGILIY 1262>NP_620598 Length = 253 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 GVMIYAY 9 G++ YAY Sbjct: 108 GILAYAY 114>NP_079052 Length = 1746 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 RTGVMIY 7 +TG++IY Sbjct: 1594 QTGILIY 1600>NP_620599 Length = 253 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 GVMIYAY 9 G++ YAY Sbjct: 108 GILAYAY 114>NP_004348 Length = 253 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 GVMIYAY 9 G++ YAY Sbjct: 108 GILAYAY 114>NP_001034579 Length = 253 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 GVMIYAY 9 G++ YAY Sbjct: 108 GILAYAY 114>NP_055826 Length = 1858 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 2 TGVMIYAY 9 TG IY Y Sbjct: 569 TGARIYTY 576>NP_001185879 Length = 1880 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 2 TGVMIYAY 9 TG IY Y Sbjct: 591 TGARIYTY 598>NP_443188 Length = 577 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 RTGVMIY 7 RTG+++Y Sbjct: 358 RTGLLLY 364>NP_937822 Length = 431 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TGVMIYA 8 TGV+I+A Sbjct: 51 TGVLIFA 57>XP_006721081 Length = 357 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 RTGVMIY 7 RTG+++Y Sbjct: 138 RTGLLLY 144>XP_005255143 Length = 397 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 RTGVMIY 7 RTG+++Y Sbjct: 178 RTGLLLY 184>XP_006721080 Length = 516 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 RTGVMIY 7 RTG+++Y Sbjct: 358 RTGLLLY 364>XP_006721079 Length = 543 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 RTGVMIY 7 RTG+++Y Sbjct: 358 RTGLLLY 364>XP_005255141 Length = 577 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 RTGVMIY 7 RTG+++Y Sbjct: 358 RTGLLLY 364>XP_005254732 Length = 1746 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 RTGVMIY 7 +TG++IY Sbjct: 1594 QTGILIY 1600>XP_005254731 Length = 1746 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 RTGVMIY 7 +TG++IY Sbjct: 1594 QTGILIY 1600>XP_006720754 Length = 1746 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 RTGVMIY 7 +TG++IY Sbjct: 1594 QTGILIY 1600>XP_005254729 Length = 1746 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 RTGVMIY 7 +TG++IY Sbjct: 1594 QTGILIY 1600>XP_005254730 Length = 1746 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 RTGVMIY 7 +TG++IY Sbjct: 1594 QTGILIY 1600>XP_005254728 Length = 1746 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 RTGVMIY 7 +TG++IY Sbjct: 1594 QTGILIY 1600>XP_005254727 Length = 1746 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 RTGVMIY 7 +TG++IY Sbjct: 1594 QTGILIY 1600>XP_006716443 Length = 191 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 TGVMIYAY 9 TG+++Y Y Sbjct: 99 TGLVVYDY 106>XP_006716442 Length = 191 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 TGVMIYAY 9 TG+++Y Y Sbjct: 99 TGLVVYDY 106>XP_005273655 Length = 257 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 TGVMIYAY 9 TG+++Y Y Sbjct: 148 TGLVVYDY 155>XP_005272427 Length = 1406 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 RTGVMIY 7 +TG++IY Sbjct: 1256 QTGILIY 1262>XP_005272426 Length = 1406 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 RTGVMIY 7 +TG++IY Sbjct: 1256 QTGILIY 1262Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.336 0.145 0.441 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 395,290 Number of extensions: 699 Number of successful extensions: 57 Number of sequences better than 10000.0: 57 Number of HSP's gapped: 57 Number of HSP's successfully gapped: 57 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |