Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_055365 20 390 NP_115791 17 3301 NP_005040 17 3301 XP_006723973 17 3301 XP_006715859 17 3301 XP_006715858 17 3301 XP_006715857 17 3301 XP_006710159 17 3301 NP_001254635 17 4312 NP_054862 17 4312 NP_006161 17 4312 NP_001028886 17 4312 NP_001245239 17 4312 NP_001245237 17 4312 NP_001245238 17 4312 XP_005253748 17 4312 NP_055999 16 5631 NP_001137854 16 5631 NP_001160006 16 5631 NP_001160005 16 5631 XP_005248604 16 5631 XP_005248602 16 5631 XP_006713136 16 5631 NP_001136021 16 5631 NP_077726 16 5631 NP_001191330 16 7355 NP_001158 16 7355 NP_006827 16 7355 XP_006724817 16 7355 XP_005269369 16 7355 XP_005269368 16 7355 XP_005269367 16 7355 NP_689912 16 7355 NP_001124295 15 9605 NP_001370 15 9605 NP_001166037 15 9605 NP_001166039 15 9605 NP_002459 15 9605 NP_001166040 15 9605 NP_001166038 15 9605 NP_036441 15 9605 NP_001277114 15 9605 NP_068375 15 9605 NP_573573 15 9605 NP_061836 15 9605 NP_079175 15 9605 NP_001258918 15 9605 NP_057306 15 9605 NP_387505 15 9605 XP_005261051 15 9605 XP_006722744 15 9605 XP_006722420 15 9605 XP_006722419 15 9605 XP_005258207 15 9605 XP_005258206 15 9605 XP_005277989 15 9605 XP_006718541 15 9605 XP_006718540 15 9605 XP_005277987 15 9605 XP_006714933 15 9605 XP_006713233 15 9605 XP_005265229 15 9605 XP_005245315 15 9605 XP_006711447 15 9605 XP_005245314 15 9605 NP_002637 15 9605>NP_055365 Length = 1032 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 RTGRLMDI 8 RTGRLMDI Sbjct: 77 RTGRLMDI 84>NP_115791 Length = 1154 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RTGRLMDI 8 R GRL+DI Sbjct: 72 RAGRLLDI 79>NP_005040 Length = 919 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RTGRLMDI 8 +TGRL+D+ Sbjct: 489 QTGRLLDV 496>XP_006723973 Length = 919 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RTGRLMDI 8 +TGRL+D+ Sbjct: 489 QTGRLLDV 496>XP_006715859 Length = 854 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RTGRLMDI 8 R GRL+DI Sbjct: 72 RAGRLLDI 79>XP_006715858 Length = 1267 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RTGRLMDI 8 R GRL+DI Sbjct: 72 RAGRLLDI 79>XP_006715857 Length = 1268 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RTGRLMDI 8 R GRL+DI Sbjct: 72 RAGRLLDI 79>XP_006710159 Length = 919 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RTGRLMDI 8 +TGRL+D+ Sbjct: 489 QTGRLLDV 496>NP_001254635 Length = 176 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RTGRLMDI 8 R GR+MD+ Sbjct: 148 RKGRMMDV 155>NP_054862 Length = 290 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RTGRLMDI 8 R GR+MD+ Sbjct: 262 RKGRMMDV 269>NP_006161 Length = 808 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GRLMDIF 9 G+LMD+F Sbjct: 282 GKLMDLF 288>NP_001028886 Length = 808 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GRLMDIF 9 G+LMD+F Sbjct: 282 GKLMDLF 288>NP_001245239 Length = 628 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GRLMDIF 9 G+LMD+F Sbjct: 282 GKLMDLF 288>NP_001245237 Length = 812 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GRLMDIF 9 G+LMD+F Sbjct: 286 GKLMDLF 292>NP_001245238 Length = 845 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GRLMDIF 9 G+LMD+F Sbjct: 319 GKLMDLF 325>XP_005253748 Length = 812 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GRLMDIF 9 G+LMD+F Sbjct: 286 GKLMDLF 292>NP_055999 Length = 1001 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RTGRLMDIF 9 RTG+ DIF Sbjct: 69 RTGKNTDIF 77>NP_001137854 Length = 1127 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RTGRLMDIF 9 RTG+ DIF Sbjct: 195 RTGKNTDIF 203>NP_001160006 Length = 575 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GRLMDI 8 GRLMDI Sbjct: 275 GRLMDI 280>NP_001160005 Length = 704 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GRLMDI 8 GRLMDI Sbjct: 404 GRLMDI 409>XP_005248604 Length = 666 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GRLMDI 8 GRLMDI Sbjct: 366 GRLMDI 371>XP_005248602 Length = 700 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GRLMDI 8 GRLMDI Sbjct: 400 GRLMDI 405>XP_006713136 Length = 1022 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RTGRLMDIF 9 RTG+ DIF Sbjct: 90 RTGKNTDIF 98>NP_001136021 Length = 690 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GRLMDI 8 GRLMDI Sbjct: 390 GRLMDI 395>NP_077726 Length = 724 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GRLMDI 8 GRLMDI Sbjct: 424 GRLMDI 429>NP_001191330 Length = 497 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RTGRLMDI 8 RTG+++DI Sbjct: 142 RTGQVVDI 149>NP_001158 Length = 497 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RTGRLMDI 8 RTG+++DI Sbjct: 142 RTGQVVDI 149>NP_006827 Length = 2671 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GRLMDIF 9 GRLM+I+ Sbjct: 1199 GRLMEIY 1205>XP_006724817 Length = 497 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RTGRLMDI 8 RTG+++DI Sbjct: 142 RTGQVVDI 149>XP_005269369 Length = 681 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GRLMDIF 9 GRL D+F Sbjct: 527 GRLKDVF 533>XP_005269368 Length = 709 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GRLMDIF 9 GRL D+F Sbjct: 527 GRLKDVF 533>XP_005269367 Length = 727 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GRLMDIF 9 GRL D+F Sbjct: 527 GRLKDVF 533>NP_689912 Length = 755 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GRLMDIF 9 GRL D+F Sbjct: 527 GRLKDVF 533>NP_001124295 Length = 1632 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RTGRLMDIF 9 R GR+ +IF Sbjct: 1008 RIGRIKEIF 1016>NP_001370 Length = 1616 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RTGRLMDIF 9 R GR+ +IF Sbjct: 992 RIGRIKEIF 1000>NP_001166037 Length = 159 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TGRLMD 7 TGRL+D Sbjct: 84 TGRLLD 89>NP_001166039 Length = 264 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TGRLMD 7 TGRL+D Sbjct: 84 TGRLLD 89>NP_002459 Length = 309 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TGRLMD 7 TGRL+D Sbjct: 84 TGRLLD 89>NP_001166040 Length = 204 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TGRLMD 7 TGRL+D Sbjct: 84 TGRLLD 89>NP_001166038 Length = 317 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TGRLMD 7 TGRL+D Sbjct: 84 TGRLLD 89>NP_036441 Length = 1849 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TGRLMD 7 TGRL+D Sbjct: 1206 TGRLLD 1211>NP_001277114 Length = 931 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 RTGRLMDIF 9 ++GR D+F Sbjct: 645 KSGRFCDVF 653>NP_068375 Length = 941 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 RTGRLMDIF 9 ++GR D+F Sbjct: 655 KSGRFCDVF 663>NP_573573 Length = 1261 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TGRLMD 7 TGRL+D Sbjct: 618 TGRLLD 623>NP_061836 Length = 2320 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TGRLMD 7 TG+LMD Sbjct: 1031 TGKLMD 1036>NP_079175 Length = 659 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RTGRLMD 7 R GRL+D Sbjct: 328 RAGRLLD 334>NP_001258918 Length = 584 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RTGRLMD 7 R GRL+D Sbjct: 253 RAGRLLD 259>NP_057306 Length = 622 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GRLMDI 8 GRLMD+ Sbjct: 322 GRLMDL 327>NP_387505 Length = 2269 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TGRLMD 7 TG+LMD Sbjct: 1031 TGKLMD 1036>XP_005261051 Length = 2242 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TGRLMD 7 TG+LMD Sbjct: 953 TGKLMD 958>XP_006722744 Length = 1495 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RTGRLMDIF 9 R GR+ +IF Sbjct: 871 RIGRIKEIF 879>XP_006722420 Length = 481 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RTGRLMD 7 R GRL+D Sbjct: 150 RAGRLLD 156>XP_006722419 Length = 481 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RTGRLMD 7 R GRL+D Sbjct: 150 RAGRLLD 156>XP_005258207 Length = 481 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RTGRLMD 7 R GRL+D Sbjct: 150 RAGRLLD 156>XP_005258206 Length = 657 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RTGRLMD 7 R GRL+D Sbjct: 328 RAGRLLD 334>XP_005277989 Length = 1470 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TGRLMD 7 TGRL+D Sbjct: 827 TGRLLD 832>XP_006718541 Length = 1839 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TGRLMD 7 TGRL+D Sbjct: 1196 TGRLLD 1201>XP_006718540 Length = 1842 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TGRLMD 7 TGRL+D Sbjct: 1199 TGRLLD 1204>XP_005277987 Length = 1849 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TGRLMD 7 TGRL+D Sbjct: 1206 TGRLLD 1211>XP_006714933 Length = 496 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GRLMDI 8 GRLMD+ Sbjct: 196 GRLMDL 201>XP_006713233 Length = 213 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TGRLMD 7 TGRL+D Sbjct: 84 TGRLLD 89>XP_005265229 Length = 258 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TGRLMD 7 TGRL+D Sbjct: 84 TGRLLD 89>XP_005245315 Length = 1607 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 TGRLMDIF 9 +GR+ D+F Sbjct: 1337 SGRISDVF 1344>XP_006711447 Length = 1634 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 TGRLMDIF 9 +GR+ D+F Sbjct: 1364 SGRISDVF 1371>XP_005245314 Length = 1634 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 TGRLMDIF 9 +GR+ D+F Sbjct: 1364 SGRISDVF 1371>NP_002637 Length = 1634 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 TGRLMDIF 9 +GR+ D+F Sbjct: 1364 SGRISDVF 1371Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.345 0.159 0.476 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 496,962 Number of extensions: 835 Number of successful extensions: 66 Number of sequences better than 10000.0: 66 Number of HSP's gapped: 66 Number of HSP's successfully gapped: 66 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |