Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 20 390 NP_001075109 20 390 NP_002518 17 4312 NP_001096124 17 4312 NP_078880 17 4312 NP_001139547 17 4312 NP_001139548 17 4312 NP_001191355 16 7355 NP_001244068 16 7355 NP_055722 16 7355 NP_001011703 16 7355 NP_258257 16 7355 NP_001268861 16 7355 NP_060230 16 7355 NP_001268862 16 7355 NP_004061 16 7355 NP_002305 16 7355 XP_005252354 16 7355 XP_005249604 16 7355 NP_001036169 16 7355 NP_036595 15 9605 NP_001123488 15 9605 NP_001032519 15 9605 NP_775859 15 9605 NP_055776 15 9605 NP_001123489 15 9605 NP_064506 15 9605 NP_001170 15 9605 NP_001258769 15 9605 NP_001124181 15 9605 NP_085150 15 9605 NP_001363 15 9605 XP_005253620 15 9605 XP_006718010 15 9605 XP_005263062 15 9605 XP_005263061 15 9605 XP_005263060 15 9605 XP_005263059 15 9605 XP_006714283 15 9605 XP_005263056 15 9605 XP_006714282 15 9605 XP_006714281 15 9605 XP_005263054 15 9605 XP_005265716 15 9605 XP_006714213 15 9605 XP_006714212 15 9605 XP_005265715 15 9605 XP_005265714 15 9605 XP_006714211 15 9605 XP_005265713 15 9605 XP_006713783 15 9605 XP_005247745 15 9605 XP_006713782 15 9605 NP_004653 15 9605 NP_006497 15 9605>NP_008835 Length = 4128 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RTFLGELKT 9 R FLGELKT Sbjct: 198 RAFLGELKT 206>NP_001075109 Length = 4097 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RTFLGELKT 9 R FLGELKT Sbjct: 198 RAFLGELKT 206>NP_002518 Length = 257 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TFLGELKT 9 T LGE+KT Sbjct: 174 TVLGEIKT 181>NP_001096124 Length = 270 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TFLGELKT 9 T LGE+KT Sbjct: 187 TVLGEIKT 194>NP_078880 Length = 665 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RTFLGEL 7 RTFLG+L Sbjct: 360 RTFLGKL 366>NP_001139547 Length = 631 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RTFLGEL 7 RTFLG+L Sbjct: 360 RTFLGKL 366>NP_001139548 Length = 506 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RTFLGEL 7 RTFLG+L Sbjct: 201 RTFLGKL 207>NP_001191355 Length = 613 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RTFLGELK 8 RTFL E+K Sbjct: 345 RTFLKEVK 352>NP_001244068 Length = 644 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RTFLGELKT 9 RTFL +KT Sbjct: 261 RTFLSFIKT 269>NP_055722 Length = 1578 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LGELKT 9 LGELKT Sbjct: 390 LGELKT 395>NP_001011703 Length = 221 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TFLGELKT 9 TF+GEL + Sbjct: 177 TFIGELNS 184>NP_258257 Length = 319 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TFLGELKT 9 TF+GEL + Sbjct: 177 TFIGELNS 184>NP_001268861 Length = 1143 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RTFLGELK 8 R+FL ELK Sbjct: 1060 RSFLDELK 1067>NP_060230 Length = 1143 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RTFLGELK 8 R+FL ELK Sbjct: 1060 RSFLDELK 1067>NP_001268862 Length = 1156 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RTFLGELK 8 R+FL ELK Sbjct: 1060 RSFLDELK 1067>NP_004061 Length = 687 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RTFLGELKT 9 RTFL +KT Sbjct: 304 RTFLSFIKT 312>NP_002305 Length = 647 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RTFLGELK 8 RTFL E+K Sbjct: 379 RTFLKEVK 386>XP_005252354 Length = 304 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TFLGELKT 9 TF+GEL + Sbjct: 162 TFIGELNS 169>XP_005249604 Length = 1096 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RTFLGELK 8 R+FL ELK Sbjct: 1013 RSFLDELK 1020>NP_001036169 Length = 686 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RTFLGELKT 9 RTFL +KT Sbjct: 304 RTFLSFIKT 312>NP_036595 Length = 856 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RTFLGELK 8 R F+GE+K Sbjct: 49 RKFVGEVK 56>NP_001123488 Length = 389 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 FLGELKT 9 FLG LKT Sbjct: 258 FLGGLKT 264>NP_001032519 Length = 620 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RTFLGELKT 9 +TFLG+ K+ Sbjct: 120 KTFLGQNKS 128>NP_775859 Length = 1326 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 FLGELK 8 FLGE+K Sbjct: 330 FLGEMK 335>NP_055776 Length = 469 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RTFLGELKT 9 +TFLG+ K+ Sbjct: 120 KTFLGQNKS 128>NP_001123489 Length = 367 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 FLGELKT 9 FLG LKT Sbjct: 258 FLGGLKT 264>NP_064506 Length = 1516 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RTFLGEL 7 R+FLG+L Sbjct: 807 RSFLGQL 813>NP_001170 Length = 378 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 FLGELKT 9 FLG LKT Sbjct: 258 FLGGLKT 264>NP_001258769 Length = 419 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RTFLGELK 8 RTF G+LK Sbjct: 76 RTFDGKLK 83>NP_001124181 Length = 506 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RTFLGELKT 9 +TFLG+ K+ Sbjct: 180 KTFLGQNKS 188>NP_085150 Length = 941 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RTFLGELKT 9 RTF+ EL++ Sbjct: 120 RTFIKELRS 128>NP_001363 Length = 4486 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RTFLGE 6 RT+LGE Sbjct: 4128 RTYLGE 4133>XP_005253620 Length = 816 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RTFLGELK 8 R F+GE+K Sbjct: 49 RKFVGEVK 56>XP_006718010 Length = 419 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RTFLGELK 8 RTF G+LK Sbjct: 76 RTFDGKLK 83>XP_005263062 Length = 353 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 FLGELKT 9 FLG LKT Sbjct: 258 FLGGLKT 264>XP_005263061 Length = 356 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 FLGELKT 9 FLG LKT Sbjct: 258 FLGGLKT 264>XP_005263060 Length = 357 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 FLGELKT 9 FLG LKT Sbjct: 258 FLGGLKT 264>XP_005263059 Length = 363 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 FLGELKT 9 FLG LKT Sbjct: 258 FLGGLKT 264>XP_006714283 Length = 368 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 FLGELKT 9 FLG LKT Sbjct: 258 FLGGLKT 264>XP_005263056 Length = 378 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 FLGELKT 9 FLG LKT Sbjct: 258 FLGGLKT 264>XP_006714282 Length = 379 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 FLGELKT 9 FLG LKT Sbjct: 258 FLGGLKT 264>XP_006714281 Length = 390 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 FLGELKT 9 FLG LKT Sbjct: 258 FLGGLKT 264>XP_005263054 Length = 400 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 FLGELKT 9 FLG LKT Sbjct: 258 FLGGLKT 264>XP_005265716 Length = 487 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RTFLGELKT 9 +TFLG+ K+ Sbjct: 138 KTFLGQNKS 146>XP_006714213 Length = 544 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RTFLGELKT 9 +TFLG+ K+ Sbjct: 138 KTFLGQNKS 146>XP_006714212 Length = 545 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RTFLGELKT 9 +TFLG+ K+ Sbjct: 138 KTFLGQNKS 146>XP_005265715 Length = 556 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RTFLGELKT 9 +TFLG+ K+ Sbjct: 56 KTFLGQNKS 64>XP_005265714 Length = 567 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RTFLGELKT 9 +TFLG+ K+ Sbjct: 67 KTFLGQNKS 75>XP_006714211 Length = 615 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RTFLGELKT 9 +TFLG+ K+ Sbjct: 138 KTFLGQNKS 146>XP_005265713 Length = 638 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RTFLGELKT 9 +TFLG+ K+ Sbjct: 138 KTFLGQNKS 146>XP_006713783 Length = 633 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 FLGELK 8 FLGE+K Sbjct: 47 FLGEIK 52>XP_005247745 Length = 850 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 FLGELK 8 FLGE+K Sbjct: 268 FLGEIK 273>XP_006713782 Length = 854 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 FLGELK 8 FLGE+K Sbjct: 268 FLGEIK 273>NP_004653 Length = 798 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RTFLGE 6 RT+LGE Sbjct: 440 RTYLGE 445>NP_006497 Length = 849 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 FLGELK 8 FLGE+K Sbjct: 268 FLGEIK 273Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.324 0.142 0.392 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 460,958 Number of extensions: 632 Number of successful extensions: 55 Number of sequences better than 10000.0: 55 Number of HSP's gapped: 55 Number of HSP's successfully gapped: 55 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |