Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001005415 17 3301 XP_006722825 17 3301 NP_057580 17 3301 NP_055809 16 7355 NP_001128493 16 7355 NP_001122080 16 7355 NP_001128495 16 7355 NP_001128494 16 7355 NP_115589 16 7355 NP_001252540 16 7355 NP_542166 16 7355 NP_056357 16 7355 NP_001269937 16 7355 NP_001269936 16 7355 NP_001269934 16 7355 NP_001269933 16 7355 NP_001269932 16 7355 NP_001269931 16 7355 NP_001269930 16 7355 NP_001269929 16 7355 NP_001269927 16 7355 NP_001269925 16 7355 NP_001269924 16 7355 NP_003425 16 7355 NP_001257337 16 7355 NP_001076799 16 7355 NP_001269928 16 7355 NP_001269935 16 7355 NP_001269926 16 7355 NP_067042 16 7355 XP_006724100 16 7355 XP_006723682 16 7355 XP_006723681 16 7355 XP_006723680 16 7355 XP_006723679 16 7355 XP_005260880 16 7355 XP_005260877 16 7355 XP_005260876 16 7355 XP_005260875 16 7355 XP_006720502 16 7355 XP_006720501 16 7355 XP_005264655 16 7355 XP_005264654 16 7355 XP_005264653 16 7355 NP_001245135 15 9605 NP_001245136 15 9605 NP_005419 15 9605 NP_003451 15 9605 NP_001230085 15 9605 NP_006292 15 9605 NP_005670 15 9605 NP_647610 15 9605 NP_001180440 15 9605 NP_001277033 15 9605 XP_006721392 15 9605 XP_006721391 15 9605 XP_005256284 15 9605 XP_006721390 15 9605 XP_006721389 15 9605 XP_005256283 15 9605 XP_006721388 15 9605 XP_005255619 15 9605 XP_006719652 15 9605 XP_006719651 15 9605 XP_005269195 15 9605 NP_001929 15 9605>NP_001005415 Length = 246 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RTEKRTI 7 RTEKRT+ Sbjct: 132 RTEKRTL 138>XP_006722825 Length = 246 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RTEKRTI 7 RTEKRT+ Sbjct: 132 RTEKRTL 138>NP_057580 Length = 246 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RTEKRTI 7 RTEKRT+ Sbjct: 132 RTEKRTL 138>NP_055809 Length = 1508 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RTEKRTISS 9 R+E R+ISS Sbjct: 1085 RSESRSISS 1093>NP_001128493 Length = 381 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RTEKRTIS 8 RT+++TIS Sbjct: 300 RTQRKTIS 307>NP_001122080 Length = 1514 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RTEKRTISS 9 R+E R+ISS Sbjct: 1091 RSESRSISS 1099>NP_001128495 Length = 381 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RTEKRTIS 8 RT+++TIS Sbjct: 300 RTQRKTIS 307>NP_001128494 Length = 381 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RTEKRTIS 8 RT+++TIS Sbjct: 300 RTQRKTIS 307>NP_115589 Length = 391 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RTEKRTIS 8 RT+++TIS Sbjct: 300 RTQRKTIS 307>NP_001252540 Length = 1231 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RTEKRTISS 9 R+E R+ISS Sbjct: 1085 RSESRSISS 1093>NP_542166 Length = 1272 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TEKRTISS 9 +E+RT+SS Sbjct: 26 SERRTVSS 33>NP_056357 Length = 1272 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TEKRTISS 9 +E+RT+SS Sbjct: 26 SERRTVSS 33>NP_001269937 Length = 559 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RTEKRTISS 9 RT+KRT+ + Sbjct: 62 RTKKRTLGA 70>NP_001269936 Length = 667 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RTEKRTISS 9 RT+KRT+ + Sbjct: 170 RTKKRTLGA 178>NP_001269934 Length = 635 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RTEKRTISS 9 RT+KRT+ + Sbjct: 138 RTKKRTLGA 146>NP_001269933 Length = 591 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RTEKRTISS 9 RT+KRT+ + Sbjct: 94 RTKKRTLGA 102>NP_001269932 Length = 591 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RTEKRTISS 9 RT+KRT+ + Sbjct: 94 RTKKRTLGA 102>NP_001269931 Length = 657 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RTEKRTISS 9 RT+KRT+ + Sbjct: 160 RTKKRTLGA 168>NP_001269930 Length = 654 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RTEKRTISS 9 RT+KRT+ + Sbjct: 157 RTKKRTLGA 165>NP_001269929 Length = 654 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RTEKRTISS 9 RT+KRT+ + Sbjct: 157 RTKKRTLGA 165>NP_001269927 Length = 654 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RTEKRTISS 9 RT+KRT+ + Sbjct: 157 RTKKRTLGA 165>NP_001269925 Length = 671 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RTEKRTISS 9 RT+KRT+ + Sbjct: 174 RTKKRTLGA 182>NP_001269924 Length = 653 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RTEKRTISS 9 RT+KRT+ + Sbjct: 156 RTKKRTLGA 164>NP_003425 Length = 653 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RTEKRTISS 9 RT+KRT+ + Sbjct: 156 RTKKRTLGA 164>NP_001257337 Length = 312 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RTEKRTISS 9 +T K+T+SS Sbjct: 51 KTPKKTVSS 59>NP_001076799 Length = 653 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RTEKRTISS 9 RT+KRT+ + Sbjct: 156 RTKKRTLGA 164>NP_001269928 Length = 654 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RTEKRTISS 9 RT+KRT+ + Sbjct: 157 RTKKRTLGA 165>NP_001269935 Length = 661 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RTEKRTISS 9 RT+KRT+ + Sbjct: 164 RTKKRTLGA 172>NP_001269926 Length = 654 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RTEKRTISS 9 RT+KRT+ + Sbjct: 157 RTKKRTLGA 165>NP_067042 Length = 298 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RTEKRTISS 9 +T K+T+SS Sbjct: 51 KTPKKTVSS 59>XP_006724100 Length = 305 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RTEKRTISS 9 +T K+T+SS Sbjct: 51 KTPKKTVSS 59>XP_006723682 Length = 559 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RTEKRTISS 9 RT+KRT+ + Sbjct: 62 RTKKRTLGA 70>XP_006723681 Length = 590 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RTEKRTISS 9 RT+KRT+ + Sbjct: 93 RTKKRTLGA 101>XP_006723680 Length = 591 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RTEKRTISS 9 RT+KRT+ + Sbjct: 94 RTKKRTLGA 102>XP_006723679 Length = 654 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RTEKRTISS 9 RT+KRT+ + Sbjct: 157 RTKKRTLGA 165>XP_005260880 Length = 654 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RTEKRTISS 9 RT+KRT+ + Sbjct: 157 RTKKRTLGA 165>XP_005260877 Length = 654 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RTEKRTISS 9 RT+KRT+ + Sbjct: 157 RTKKRTLGA 165>XP_005260876 Length = 654 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RTEKRTISS 9 RT+KRT+ + Sbjct: 157 RTKKRTLGA 165>XP_005260875 Length = 656 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RTEKRTISS 9 RT+KRT+ + Sbjct: 159 RTKKRTLGA 167>XP_006720502 Length = 931 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RTEKRTISS 9 R+E R+ISS Sbjct: 508 RSESRSISS 516>XP_006720501 Length = 1459 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RTEKRTISS 9 R+E R+ISS Sbjct: 1036 RSESRSISS 1044>XP_005264655 Length = 391 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RTEKRTIS 8 RT+++TIS Sbjct: 300 RTQRKTIS 307>XP_005264654 Length = 391 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RTEKRTIS 8 RT+++TIS Sbjct: 300 RTQRKTIS 307>XP_005264653 Length = 391 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RTEKRTIS 8 RT+++TIS Sbjct: 300 RTQRKTIS 307>NP_001245135 Length = 823 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 EKRTIS 8 EKRTIS Sbjct: 747 EKRTIS 752>NP_001245136 Length = 813 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 EKRTIS 8 EKRTIS Sbjct: 737 EKRTIS 742>NP_005419 Length = 845 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 EKRTIS 8 EKRTIS Sbjct: 769 EKRTIS 774>NP_003451 Length = 745 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EKRTISS 9 EKRT+S+ Sbjct: 738 EKRTVSN 744>NP_001230085 Length = 843 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RTEKRTISS 9 RT+K+T+ S Sbjct: 138 RTKKKTVVS 146>NP_006292 Length = 859 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RTEKRTISS 9 R++KR ISS Sbjct: 711 RSQKRGISS 719>NP_005670 Length = 869 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RTEKRTISS 9 RT+K+T+ S Sbjct: 138 RTKKKTVVS 146>NP_647610 Length = 775 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RTEKRTISS 9 RT+K+T+ S Sbjct: 71 RTKKKTVVS 79>NP_001180440 Length = 892 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RTEKRTISS 9 R++KR ISS Sbjct: 744 RSQKRGISS 752>NP_001277033 Length = 736 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EKRTISS 9 EKRT+S+ Sbjct: 729 EKRTVSN 735>XP_006721392 Length = 744 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RTEKRTISS 9 RT+K+T+ S Sbjct: 13 RTKKKTVVS 21>XP_006721391 Length = 744 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RTEKRTISS 9 RT+K+T+ S Sbjct: 13 RTKKKTVVS 21>XP_005256284 Length = 802 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RTEKRTISS 9 RT+K+T+ S Sbjct: 71 RTKKKTVVS 79>XP_006721390 Length = 824 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RTEKRTISS 9 RT+K+T+ S Sbjct: 139 RTKKKTVVS 147>XP_006721389 Length = 844 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RTEKRTISS 9 RT+K+T+ S Sbjct: 139 RTKKKTVVS 147>XP_005256283 Length = 869 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RTEKRTISS 9 RT+K+T+ S Sbjct: 138 RTKKKTVVS 146>XP_006721388 Length = 870 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RTEKRTISS 9 RT+K+T+ S Sbjct: 139 RTKKKTVVS 147>XP_005255619 Length = 834 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EKRTISS 9 EKRT+S+ Sbjct: 827 EKRTVSN 833>XP_006719652 Length = 759 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RTEKRTISS 9 R++KR ISS Sbjct: 611 RSQKRGISS 619>XP_006719651 Length = 892 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RTEKRTISS 9 R++KR ISS Sbjct: 744 RSQKRGISS 752>XP_005269195 Length = 892 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RTEKRTISS 9 R++KR ISS Sbjct: 744 RSQKRGISS 752>NP_001929 Length = 176 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RTEKRTIS 8 ++EK+TIS Sbjct: 60 KSEKKTIS 67Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.300 0.109 0.248 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 436,069 Number of extensions: 555 Number of successful extensions: 66 Number of sequences better than 10000.0: 66 Number of HSP's gapped: 66 Number of HSP's successfully gapped: 66 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |