Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004351 20 299 NP_003794 18 1135 NP_062830 18 1135 NP_078858 17 2528 NP_001278232 17 2528 NP_001278214 17 2528 NP_001271169 17 2528 NP_001271170 17 2528 NP_061872 17 2528 XP_005269963 17 2528 XP_005269962 17 2528 XP_005256013 17 4312 NP_001167535 16 7355 NP_001167534 16 7355 NP_001167536 16 7355 NP_000312 16 7355 NP_056934 16 7355 NP_075598 16 7355 NP_001167538 16 7355 NP_001035915 16 7355 NP_689564 16 7355 NP_001257578 16 7355 NP_001257577 16 7355 XP_005258838 16 7355 XP_006721514 16 7355 XP_006721513 16 7355 XP_005256514 16 7355 XP_006716372 16 7355 XP_006716371 16 7355 XP_006716370 16 7355 XP_006716369 16 7355 XP_006716368 16 7355 XP_006716367 16 7355 XP_006716366 16 7355 NP_001157576 15 9605 NP_001157577 15 9605 NP_061868 15 9605 NP_061325 15 9605 NP_940998 15 9605 NP_001155313 15 9605 NP_775922 15 9605 XP_006724481 15 9605 XP_005261980 15 9605 XP_006723893 15 9605 XP_005260515 15 9605 XP_006723892 15 9605 XP_006723891 15 9605 XP_006723890 15 9605>NP_004351 Length = 882 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RTAYFSLNT 9 RTAYFSL+T Sbjct: 65 RTAYFSLDT 73>NP_003794 Length = 1685 Score = 18.5 bits (36), Expect = 1135 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RTAYFSLN 8 RTAYF++N Sbjct: 1627 RTAYFTIN 1634>NP_062830 Length = 1589 Score = 18.5 bits (36), Expect = 1135 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RTAYFSLN 8 RTAYF++N Sbjct: 1531 RTAYFTIN 1538>NP_078858 Length = 4981 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 TAYFSLNT 9 T+YFSL+T Sbjct: 3555 TSYFSLST 3562>NP_001278232 Length = 4983 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 TAYFSLNT 9 T+YFSL+T Sbjct: 3557 TSYFSLST 3564>NP_001278214 Length = 4982 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 TAYFSLNT 9 T+YFSL+T Sbjct: 3557 TSYFSLST 3564>NP_001271169 Length = 1047 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RTAYFSLNT 9 RT+Y S+NT Sbjct: 160 RTSYSSINT 168>NP_001271170 Length = 567 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RTAYFSLNT 9 RT+Y S+NT Sbjct: 160 RTSYSSINT 168>NP_061872 Length = 834 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RTAYFSLNT 9 RT+Y S+NT Sbjct: 160 RTSYSSINT 168>XP_005269963 Length = 837 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RTAYFSLNT 9 RT+Y S+NT Sbjct: 160 RTSYSSINT 168>XP_005269962 Length = 850 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RTAYFSLNT 9 RT+Y S+NT Sbjct: 160 RTSYSSINT 168>XP_005256013 Length = 127 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RTAYFSLNT 9 RTA+FS +T Sbjct: 86 RTAFFSWDT 94>NP_001167535 Length = 812 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 TAYFSLN 8 T YFS+N Sbjct: 103 TTYFSVN 109>NP_001167534 Length = 820 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 TAYFSLN 8 T YFS+N Sbjct: 111 TTYFSVN 117>NP_001167536 Length = 820 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 TAYFSLN 8 T YFS+N Sbjct: 111 TTYFSVN 117>NP_000312 Length = 928 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RTAYFSLNT 9 R AY LNT Sbjct: 656 RLAYLRLNT 664>NP_056934 Length = 820 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 TAYFSLN 8 T YFS+N Sbjct: 111 TTYFSVN 117>NP_075598 Length = 822 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 TAYFSLN 8 T YFS+N Sbjct: 111 TTYFSVN 117>NP_001167538 Length = 853 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 TAYFSLN 8 T YFS+N Sbjct: 144 TTYFSVN 150>NP_001035915 Length = 596 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 TAYFSLN 8 T YF+LN Sbjct: 25 TVYFALN 31>NP_689564 Length = 612 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 TAYFSLN 8 T YF+LN Sbjct: 25 TVYFALN 31>NP_001257578 Length = 560 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 TAYFSLN 8 T YF+LN Sbjct: 25 TVYFALN 31>NP_001257577 Length = 569 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 TAYFSLN 8 T YF+LN Sbjct: 25 TVYFALN 31>XP_005258838 Length = 563 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TAYFSLNT 9 T YFS++T Sbjct: 548 TEYFSMHT 555>XP_006721514 Length = 596 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 TAYFSLN 8 T YF+LN Sbjct: 25 TVYFALN 31>XP_006721513 Length = 598 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 TAYFSLN 8 T YF+LN Sbjct: 25 TVYFALN 31>XP_005256514 Length = 633 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 TAYFSLN 8 T YF+LN Sbjct: 25 TVYFALN 31>XP_006716372 Length = 824 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 TAYFSLN 8 T YFS+N Sbjct: 103 TTYFSVN 109>XP_006716371 Length = 830 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 TAYFSLN 8 T YFS+N Sbjct: 111 TTYFSVN 117>XP_006716370 Length = 830 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 TAYFSLN 8 T YFS+N Sbjct: 111 TTYFSVN 117>XP_006716369 Length = 830 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 TAYFSLN 8 T YFS+N Sbjct: 111 TTYFSVN 117>XP_006716368 Length = 832 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 TAYFSLN 8 T YFS+N Sbjct: 111 TTYFSVN 117>XP_006716367 Length = 832 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 TAYFSLN 8 T YFS+N Sbjct: 111 TTYFSVN 117>XP_006716366 Length = 832 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 TAYFSLN 8 T YFS+N Sbjct: 111 TTYFSVN 117>NP_001157576 Length = 1165 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RTAYFSLNT 9 +T YFSL + Sbjct: 136 QTTYFSLES 144>NP_001157577 Length = 1165 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RTAYFSLNT 9 +T YFSL + Sbjct: 116 QTTYFSLES 124>NP_061868 Length = 1211 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RTAYFSLNT 9 +T YFSL + Sbjct: 136 QTTYFSLES 144>NP_061325 Length = 870 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 YFSLNT 9 YF LNT Sbjct: 781 YFDLNT 786>NP_940998 Length = 867 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 YFSLNT 9 YF LNT Sbjct: 781 YFDLNT 786>NP_001155313 Length = 870 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 YFSLNT 9 YF LNT Sbjct: 781 YFDLNT 786>NP_775922 Length = 6996 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 AYFSLNT 9 A+FS NT Sbjct: 4450 AFFSFNT 4456>XP_006724481 Length = 1164 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RTAYFSLNT 9 +T YFSL + Sbjct: 136 QTTYFSLES 144>XP_005261980 Length = 1191 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RTAYFSLNT 9 +T YFSL + Sbjct: 116 QTTYFSLES 124>XP_006723893 Length = 870 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 YFSLNT 9 YF LNT Sbjct: 781 YFDLNT 786>XP_005260515 Length = 870 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 YFSLNT 9 YF LNT Sbjct: 781 YFDLNT 786>XP_006723892 Length = 871 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 YFSLNT 9 YF LNT Sbjct: 782 YFDLNT 787>XP_006723891 Length = 871 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 YFSLNT 9 YF LNT Sbjct: 782 YFDLNT 787>XP_006723890 Length = 871 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 YFSLNT 9 YF LNT Sbjct: 782 YFDLNT 787Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.324 0.126 0.357 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 421,803 Number of extensions: 528 Number of successful extensions: 48 Number of sequences better than 10000.0: 48 Number of HSP's gapped: 48 Number of HSP's successfully gapped: 48 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |