Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001268421 19 665 NP_000170 19 665 XP_005264328 19 665 NP_060250 18 1935 XP_005251324 18 1935 XP_005251323 18 1935 NP_079410 17 3301 NP_001036037 17 3301 NP_001262 17 3301 XP_005256233 17 3301 XP_005256232 17 3301 XP_005256231 17 3301 XP_005256229 17 3301 XP_005256228 17 3301 XP_005256227 17 3301 XP_006721346 17 3301 XP_005256226 17 3301 XP_006721345 17 3301 XP_006721344 17 3301 XP_006721343 17 3301 XP_005256225 17 3301 NP_001258767 16 5631 NP_001258763 16 5631 NP_057709 16 5631 XP_005247575 16 5631 XP_005247574 16 5631 XP_005247573 16 5631 XP_005247572 16 5631 NP_000468 16 7355 NP_060289 16 7355 NP_001139669 16 7355 NP_001073881 15 9605 NP_001167558 15 9605 NP_858045 15 9605 NP_006525 15 9605 NP_001167559 15 9605 NP_001123520 15 9605 NP_001123522 15 9605 NP_055816 15 9605 NP_776155 15 9605 NP_065922 15 9605 NP_001230892 15 9605 NP_116295 15 9605 XP_006724787 15 9605 XP_006720985 15 9605 XP_006720983 15 9605 XP_006720982 15 9605 XP_006720981 15 9605 XP_006719995 15 9605 XP_006719988 15 9605 XP_006713622 15 9605 XP_005247320 15 9605 XP_005247319 15 9605 XP_005247318 15 9605 XP_005247315 15 9605 XP_005247314 15 9605 XP_005247313 15 9605 XP_005247312 15 9605>NP_001268421 Length = 1230 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RSSRQIKKQ 9 RSSRQIKK+ Sbjct: 110 RSSRQIKKR 118>NP_000170 Length = 1360 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RSSRQIKKQ 9 RSSRQIKK+ Sbjct: 240 RSSRQIKKR 248>XP_005264328 Length = 1261 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RSSRQIKKQ 9 RSSRQIKK+ Sbjct: 141 RSSRQIKKR 149>NP_060250 Length = 2997 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 RSSRQIKKQ 9 RSSRQ+K++ Sbjct: 749 RSSRQVKRK 757Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SSRQIKKQ 9 SSR +KKQ Sbjct: 807 SSRSVKKQ 814>XP_005251324 Length = 2996 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 RSSRQIKKQ 9 RSSRQ+K++ Sbjct: 749 RSSRQVKRK 757Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SSRQIKKQ 9 SSR +KKQ Sbjct: 807 SSRSVKKQ 814>XP_005251323 Length = 2997 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 RSSRQIKKQ 9 RSSRQ+K++ Sbjct: 749 RSSRQVKRK 757Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SSRQIKKQ 9 SSR +KKQ Sbjct: 807 SSRSVKKQ 814>NP_079410 Length = 2881 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 RSSRQIKKQ 9 RS+RQIK++ Sbjct: 635 RSNRQIKRK 643>NP_001036037 Length = 501 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RSSRQIKKQ 9 R RQ+KKQ Sbjct: 140 RGQRQLKKQ 148>NP_001262 Length = 1828 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RSSRQIKKQ 9 R RQ+KKQ Sbjct: 140 RGQRQLKKQ 148>XP_005256233 Length = 2391 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 RSSRQIKKQ 9 RS+RQIK++ Sbjct: 128 RSNRQIKRK 136>XP_005256232 Length = 2424 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 RSSRQIKKQ 9 RS+RQIK++ Sbjct: 161 RSNRQIKRK 169>XP_005256231 Length = 2573 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 RSSRQIKKQ 9 RS+RQIK++ Sbjct: 635 RSNRQIKRK 643>XP_005256229 Length = 2881 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 RSSRQIKKQ 9 RS+RQIK++ Sbjct: 635 RSNRQIKRK 643>XP_005256228 Length = 2882 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 RSSRQIKKQ 9 RS+RQIK++ Sbjct: 635 RSNRQIKRK 643>XP_005256227 Length = 2897 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 RSSRQIKKQ 9 RS+RQIK++ Sbjct: 635 RSNRQIKRK 643>XP_006721346 Length = 2898 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 RSSRQIKKQ 9 RS+RQIK++ Sbjct: 635 RSNRQIKRK 643>XP_005256226 Length = 2898 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 RSSRQIKKQ 9 RS+RQIK++ Sbjct: 635 RSNRQIKRK 643>XP_006721345 Length = 2898 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 RSSRQIKKQ 9 RS+RQIK++ Sbjct: 635 RSNRQIKRK 643>XP_006721344 Length = 2898 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 RSSRQIKKQ 9 RS+RQIK++ Sbjct: 635 RSNRQIKRK 643>XP_006721343 Length = 2898 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 RSSRQIKKQ 9 RS+RQIK++ Sbjct: 635 RSNRQIKRK 643>XP_005256225 Length = 2898 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 RSSRQIKKQ 9 RS+RQIK++ Sbjct: 635 RSNRQIKRK 643>NP_001258767 Length = 334 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RSSRQIKK 8 RSS+++KK Sbjct: 246 RSSKEVKK 253>NP_001258763 Length = 276 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RSSRQIKK 8 RSS+++KK Sbjct: 188 RSSKEVKK 195>NP_057709 Length = 334 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RSSRQIKK 8 RSS+++KK Sbjct: 246 RSSKEVKK 253>XP_005247575 Length = 336 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RSSRQIKK 8 RSS+++KK Sbjct: 248 RSSKEVKK 255>XP_005247574 Length = 336 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RSSRQIKK 8 RSS+++KK Sbjct: 248 RSSKEVKK 255>XP_005247573 Length = 336 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RSSRQIKK 8 RSS+++KK Sbjct: 248 RSSKEVKK 255>XP_005247572 Length = 336 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RSSRQIKK 8 RSS+++KK Sbjct: 248 RSSKEVKK 255>NP_000468 Length = 609 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RQIKKQ 9 RQIKKQ Sbjct: 545 RQIKKQ 550>NP_060289 Length = 403 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RSSRQIKKQ 9 + +RQIKK+ Sbjct: 143 KKARQIKKE 151>NP_001139669 Length = 7081 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SSRQIKKQ 9 S RQ+KKQ Sbjct: 3464 SPRQMKKQ 3471>NP_001073881 Length = 1195 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RSSRQIKK 8 + SRQ+KK Sbjct: 926 KKSRQLKK 933>NP_001167558 Length = 1423 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RSSRQIKKQ 9 R RQIK+Q Sbjct: 77 RQIRQIKEQ 85>NP_858045 Length = 1424 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RSSRQIKKQ 9 R RQIK+Q Sbjct: 77 RQIRQIKEQ 85>NP_006525 Length = 1420 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RSSRQIKKQ 9 R RQIK+Q Sbjct: 77 RQIRQIKEQ 85>NP_001167559 Length = 1415 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RSSRQIKKQ 9 R RQIK+Q Sbjct: 77 RQIRQIKEQ 85>NP_001123520 Length = 2068 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SSRQIKKQ 9 SSR +KK+ Sbjct: 9 SSRSVKKE 16>NP_001123522 Length = 1253 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SSRQIKKQ 9 SSR +KK+ Sbjct: 9 SSRSVKKE 16>NP_055816 Length = 3664 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RSSRQIKK 8 RSSRQI + Sbjct: 1246 RSSRQISE 1253>NP_776155 Length = 155 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RSSRQIKKQ 9 ++ RQIKK+ Sbjct: 108 KAKRQIKKR 116>NP_065922 Length = 765 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RSSRQIKKQ 9 R S+QI+K+ Sbjct: 554 RRSKQIRKE 562>NP_001230892 Length = 748 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RSSRQIKKQ 9 R S+QI+K+ Sbjct: 554 RRSKQIRKE 562>NP_116295 Length = 114 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RSSRQIKKQ 9 R +RQ KKQ Sbjct: 100 RMTRQSKKQ 108>XP_006724787 Length = 601 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RSSRQIKKQ 9 R S+QI+K+ Sbjct: 390 RRSKQIRKE 398>XP_006720985 Length = 846 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RSSRQIK 7 RSSRQ++ Sbjct: 82 RSSRQVR 88>XP_006720983 Length = 891 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RSSRQIK 7 RSSRQ++ Sbjct: 82 RSSRQVR 88>XP_006720982 Length = 891 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RSSRQIK 7 RSSRQ++ Sbjct: 82 RSSRQVR 88>XP_006720981 Length = 891 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RSSRQIK 7 RSSRQ++ Sbjct: 82 RSSRQVR 88>XP_006719995 Length = 2106 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SSRQIKKQ 9 SSR +KK+ Sbjct: 9 SSRSVKKE 16>XP_006719988 Length = 2129 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SSRQIKKQ 9 SSR +KK+ Sbjct: 9 SSRSVKKE 16>XP_006713622 Length = 1195 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RSSRQIKK 8 + SRQ+KK Sbjct: 926 KKSRQLKK 933>XP_005247320 Length = 1195 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RSSRQIKK 8 + SRQ+KK Sbjct: 926 KKSRQLKK 933>XP_005247319 Length = 1195 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RSSRQIKK 8 + SRQ+KK Sbjct: 926 KKSRQLKK 933>XP_005247318 Length = 1195 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RSSRQIKK 8 + SRQ+KK Sbjct: 926 KKSRQLKK 933>XP_005247315 Length = 1195 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RSSRQIKK 8 + SRQ+KK Sbjct: 926 KKSRQLKK 933>XP_005247314 Length = 1195 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RSSRQIKK 8 + SRQ+KK Sbjct: 926 KKSRQLKK 933>XP_005247313 Length = 1196 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RSSRQIKK 8 + SRQ+KK Sbjct: 927 KKSRQLKK 934>XP_005247312 Length = 1231 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RSSRQIKK 8 + SRQ+KK Sbjct: 962 KKSRQLKK 969Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.308 0.114 0.259 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 374,113 Number of extensions: 445 Number of successful extensions: 61 Number of sequences better than 10000.0: 58 Number of HSP's gapped: 61 Number of HSP's successfully gapped: 61 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |