Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001268421 18 1935 NP_000170 18 1935 XP_005264328 18 1935 NP_001191055 17 2528 NP_006143 17 2528 NP_001191056 17 2528 NP_003416 17 2528 XP_005253431 17 2528 XP_006719140 17 2528 XP_006719139 17 2528 XP_005253429 17 2528 XP_006719138 17 2528 XP_005253428 17 2528 XP_005253427 17 2528 NP_003808 17 3301 NP_001131140 17 3301 NP_001116296 17 3301 NP_036247 17 3301 NP_001131139 17 3301 XP_005273730 17 3301 XP_005273729 17 3301 XP_005273728 17 3301 XP_005273727 17 3301 XP_005273726 17 3301 XP_005273725 17 3301 NP_001025054 17 4312 NP_660328 17 4312 NP_001245243 17 4312 XP_005246694 17 4312 NP_942009 16 5631 NP_942011 16 5631 NP_001032240 16 5631 NP_055464 16 7355 XP_005259745 16 7355 NP_848604 15 9605 NP_001073882 15 9605 NP_001238939 15 9605 NP_078898 15 9605 NP_001009909 15 9605 NP_001268405 15 9605 NP_001166923 15 9605 NP_005644 15 9605 NP_001121632 15 9605 NP_689594 15 9605 NP_055368 15 9605 NP_055332 15 9605 NP_000631 15 9605 NP_001238937 15 9605 XP_006721861 15 9605 XP_006721860 15 9605 XP_005257244 15 9605 XP_006720053 15 9605 XP_006720050 15 9605 XP_005252944 15 9605 XP_006712814 15 9605 XP_006712813 15 9605 XP_006712522 15 9605 XP_005263709 15 9605 XP_005263708 15 9605 XP_006712319 15 9605 XP_006712246 15 9605 NP_001186073 15 9605 NP_001121633 15 9605 NP_849146 15 9605>NP_001268421 Length = 1230 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RSSCQIKKR 9 RSS QIKKR Sbjct: 110 RSSRQIKKR 118>NP_000170 Length = 1360 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RSSCQIKKR 9 RSS QIKKR Sbjct: 240 RSSRQIKKR 248>XP_005264328 Length = 1261 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RSSCQIKKR 9 RSS QIKKR Sbjct: 141 RSSRQIKKR 149>NP_001191055 Length = 499 Score = 17.3 bits (33), Expect = 2528 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 CQIKKR 9 CQIKKR Sbjct: 299 CQIKKR 304>NP_006143 Length = 499 Score = 17.3 bits (33), Expect = 2528 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 CQIKKR 9 CQIKKR Sbjct: 299 CQIKKR 304>NP_001191056 Length = 499 Score = 17.3 bits (33), Expect = 2528 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 CQIKKR 9 CQIKKR Sbjct: 299 CQIKKR 304>NP_003416 Length = 682 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RSSCQIKKR 9 R+ CQ++KR Sbjct: 127 RTGCQLEKR 135>XP_005253431 Length = 499 Score = 17.3 bits (33), Expect = 2528 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 CQIKKR 9 CQIKKR Sbjct: 299 CQIKKR 304>XP_006719140 Length = 446 Score = 17.3 bits (33), Expect = 2528 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 CQIKKR 9 CQIKKR Sbjct: 246 CQIKKR 251>XP_006719139 Length = 499 Score = 17.3 bits (33), Expect = 2528 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 CQIKKR 9 CQIKKR Sbjct: 299 CQIKKR 304>XP_005253429 Length = 499 Score = 17.3 bits (33), Expect = 2528 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 CQIKKR 9 CQIKKR Sbjct: 299 CQIKKR 304>XP_006719138 Length = 499 Score = 17.3 bits (33), Expect = 2528 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 CQIKKR 9 CQIKKR Sbjct: 299 CQIKKR 304>XP_005253428 Length = 499 Score = 17.3 bits (33), Expect = 2528 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 CQIKKR 9 CQIKKR Sbjct: 299 CQIKKR 304>XP_005253427 Length = 499 Score = 17.3 bits (33), Expect = 2528 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 CQIKKR 9 CQIKKR Sbjct: 299 CQIKKR 304>NP_003808 Length = 754 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SCQIKK 8 SCQIKK Sbjct: 450 SCQIKK 455>NP_001131140 Length = 1982 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SSCQIKK 8 SSC++KK Sbjct: 1803 SSCEVKK 1809>NP_001116296 Length = 395 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RSSCQIKK 8 RS C++KK Sbjct: 54 RSGCKVKK 61>NP_036247 Length = 1982 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SSCQIKK 8 SSC++KK Sbjct: 1803 SSCEVKK 1809>NP_001131139 Length = 1982 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SSCQIKK 8 SSC++KK Sbjct: 1803 SSCEVKK 1809>XP_005273730 Length = 749 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SCQIKK 8 SCQIKK Sbjct: 450 SCQIKK 455>XP_005273729 Length = 757 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SCQIKK 8 SCQIKK Sbjct: 450 SCQIKK 455>XP_005273728 Length = 762 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SCQIKK 8 SCQIKK Sbjct: 450 SCQIKK 455>XP_005273727 Length = 776 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SCQIKK 8 SCQIKK Sbjct: 450 SCQIKK 455>XP_005273726 Length = 783 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SCQIKK 8 SCQIKK Sbjct: 450 SCQIKK 455>XP_005273725 Length = 784 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SCQIKK 8 SCQIKK Sbjct: 450 SCQIKK 455>NP_001025054 Length = 1288 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RSSCQIKK 8 RSSCQ +K Sbjct: 912 RSSCQPRK 919>NP_660328 Length = 364 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RSSCQIKK 8 + SCQ+KK Sbjct: 119 QKSCQLKK 126>NP_001245243 Length = 501 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SSCQIKKR 9 S CQI+K+ Sbjct: 25 SKCQIRKK 32>XP_005246694 Length = 518 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SSCQIKKR 9 S CQI+K+ Sbjct: 25 SKCQIRKK 32>NP_942009 Length = 374 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RSSCQIKKR 9 R CQ++KR Sbjct: 355 RKFCQMRKR 363>NP_942011 Length = 418 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RSSCQIKKR 9 R CQ++KR Sbjct: 355 RKFCQMRKR 363>NP_001032240 Length = 259 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 SCQIKKR 9 SC +KKR Sbjct: 27 SCSLKKR 33>NP_055464 Length = 953 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 RSSCQIKK 8 R C++KK Sbjct: 495 RKECEVKK 502>XP_005259745 Length = 499 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 RSSCQIKK 8 R C++KK Sbjct: 41 RKECEVKK 48>NP_848604 Length = 553 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SSCQIK 7 SSC+IK Sbjct: 163 SSCEIK 168>NP_001073882 Length = 691 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 SCQIKKR 9 +CQI+K+ Sbjct: 268 TCQIRKK 274>NP_001238939 Length = 304 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 SSCQIKK 8 S C++KK Sbjct: 278 SECEVKK 284>NP_078898 Length = 847 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RSSCQIKK 8 R+SC IK+ Sbjct: 354 RNSCLIKR 361>NP_001009909 Length = 346 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 SSCQIKK 8 S C++KK Sbjct: 320 SECEVKK 326>NP_001268405 Length = 804 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RSSCQIKK 8 R+SC IK+ Sbjct: 354 RNSCLIKR 361>NP_001166923 Length = 501 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SSCQIK 7 +SCQIK Sbjct: 231 ASCQIK 236>NP_005644 Length = 502 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SSCQIK 7 +SCQIK Sbjct: 231 ASCQIK 236>NP_001121632 Length = 504 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SSCQIK 7 +SCQIK Sbjct: 228 ASCQIK 233>NP_689594 Length = 3549 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 RSSCQIKK 8 +S+C+IK+ Sbjct: 2670 KSACEIKQ 2677>NP_055368 Length = 479 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SSCQIK 7 +SCQIK Sbjct: 211 ASCQIK 216>NP_055332 Length = 540 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SSCQIK 7 +SCQIK Sbjct: 228 ASCQIK 233>NP_000631 Length = 380 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SSCQIK 7 SSC+IK Sbjct: 250 SSCEIK 255>NP_001238937 Length = 260 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 SSCQIKK 8 S C++KK Sbjct: 234 SECEVKK 240>XP_006721861 Length = 320 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SSCQIK 7 SSC+IK Sbjct: 163 SSCEIK 168>XP_006721860 Length = 322 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SSCQIK 7 SSC+IK Sbjct: 165 SSCEIK 170>XP_005257244 Length = 555 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SSCQIK 7 SSC+IK Sbjct: 165 SSCEIK 170>XP_006720053 Length = 164 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 CQIKKR 9 CQ+K+R Sbjct: 153 CQLKRR 158>XP_006720050 Length = 195 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 CQIKKR 9 CQ+K+R Sbjct: 184 CQLKRR 189>XP_005252944 Length = 222 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 SSCQIKK 8 S C++KK Sbjct: 196 SECEVKK 202>XP_006712814 Length = 527 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RSSCQIKK 8 R+SC IK+ Sbjct: 34 RNSCLIKR 41>XP_006712813 Length = 824 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RSSCQIKK 8 R+SC IK+ Sbjct: 331 RNSCLIKR 338>XP_006712522 Length = 273 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SSCQIK 7 +SCQIK Sbjct: 211 ASCQIK 216>XP_005263709 Length = 273 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SSCQIK 7 +SCQIK Sbjct: 211 ASCQIK 216>XP_005263708 Length = 406 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SSCQIK 7 +SCQIK Sbjct: 211 ASCQIK 216>XP_006712319 Length = 3308 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 RSSCQIKK 8 +S+C+IK+ Sbjct: 2429 KSACEIKQ 2436>XP_006712246 Length = 443 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RSSCQIK 7 R SCQ+K Sbjct: 410 RRSCQMK 416>NP_001186073 Length = 3327 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 RSSCQIKK 8 +S+C+IK+ Sbjct: 2448 KSACEIKQ 2455>NP_001121633 Length = 540 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SSCQIK 7 +SCQIK Sbjct: 228 ASCQIK 233>NP_849146 Length = 697 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 SCQIKK 8 SC++KK Sbjct: 689 SCEVKK 694Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.323 0.123 0.357 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 753,706 Number of extensions: 784 Number of successful extensions: 64 Number of sequences better than 10000.0: 64 Number of HSP's gapped: 64 Number of HSP's successfully gapped: 64 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |