Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004251 17 2528 NP_068804 17 2528 NP_001005407 17 2528 NP_066921 17 2528 XP_006721028 17 2528 XP_006721027 17 2528 XP_005255709 17 2528 XP_006721026 17 2528 XP_005273638 17 3301 XP_005273637 17 3301 XP_005273635 17 3301 XP_005273634 17 3301 NP_064630 17 4312 XP_005267114 17 4312 NP_003471 16 5631 NP_078920 16 5631 XP_006719217 16 5631 XP_005253542 16 5631 NP_079541 16 7355 NP_001186346 16 7355 NP_001138866 16 7355 NP_001138864 16 7355 NP_006030 16 7355 NP_476499 16 7355 XP_006725396 16 7355 XP_006725395 16 7355 XP_006725394 16 7355 XP_006725393 16 7355 XP_006722057 16 7355 XP_006722056 16 7355 XP_006722055 16 7355 XP_006722054 16 7355 XP_005265556 16 7355 XP_005265552 16 7355 NP_001243297 15 9605 NP_001032370 15 9605 NP_443749 15 9605 NP_005873 15 9605 NP_001017405 15 9605 NP_110379 15 9605 NP_001264058 15 9605 NP_001258857 15 9605 NP_001258856 15 9605 NP_002603 15 9605 NP_060046 15 9605 NP_835258 15 9605 NP_055379 15 9605 NP_001264055 15 9605 NP_653288 15 9605 XP_005263467 15 9605 XP_006717241 15 9605 XP_006717240 15 9605 XP_005252147 15 9605 XP_005252146 15 9605 XP_006717239 15 9605 XP_005272028 15 9605 XP_005272027 15 9605 XP_005272026 15 9605 XP_005272025 15 9605 XP_005272024 15 9605 XP_005272300 15 9605 XP_006713914 15 9605 XP_006713913 15 9605 XP_006713912 15 9605 NP_001017372 15 9605 NP_054750 15 9605>NP_004251 Length = 1208 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RSRLLCKQA 9 RSRLL KQA Sbjct: 370 RSRLLRKQA 378>NP_068804 Length = 257 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RSRLLCKQ 8 RSR LC+Q Sbjct: 36 RSRCLCRQ 43>NP_001005407 Length = 2347 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SRLLCKQ 8 SRLLC+Q Sbjct: 2004 SRLLCRQ 2010>NP_066921 Length = 2353 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SRLLCKQ 8 SRLLC+Q Sbjct: 2010 SRLLCRQ 2016>XP_006721028 Length = 2336 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SRLLCKQ 8 SRLLC+Q Sbjct: 1993 SRLLCRQ 1999>XP_006721027 Length = 2342 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SRLLCKQ 8 SRLLC+Q Sbjct: 1999 SRLLCRQ 2005>XP_005255709 Length = 2347 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SRLLCKQ 8 SRLLC+Q Sbjct: 2004 SRLLCRQ 2010>XP_006721026 Length = 2358 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SRLLCKQ 8 SRLLC+Q Sbjct: 2015 SRLLCRQ 2021>XP_005273638 Length = 1228 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RSRLLCK 7 RSRL CK Sbjct: 1149 RSRLFCK 1155>XP_005273637 Length = 1228 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RSRLLCK 7 RSRL CK Sbjct: 1149 RSRLFCK 1155>XP_005273635 Length = 1282 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RSRLLCK 7 RSRL CK Sbjct: 1203 RSRLFCK 1209>XP_005273634 Length = 1282 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RSRLLCK 7 RSRL CK Sbjct: 1203 RSRLFCK 1209>NP_064630 Length = 1543 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RSRLLCKQ 8 R+R+LC Q Sbjct: 904 RTRMLCSQ 911>XP_005267114 Length = 1543 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RSRLLCKQ 8 R+R+LC Q Sbjct: 904 RTRMLCSQ 911>NP_003471 Length = 173 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SRLLCKQ 8 SRL+CK+ Sbjct: 125 SRLVCKE 131>NP_078920 Length = 641 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 RLLCKQA 9 RLLC QA Sbjct: 297 RLLCPQA 303>XP_006719217 Length = 161 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SRLLCKQ 8 SRL+CK+ Sbjct: 113 SRLVCKE 119>XP_005253542 Length = 163 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SRLLCKQ 8 SRL+CK+ Sbjct: 115 SRLVCKE 121>NP_079541 Length = 465 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 RSRLLCKQ 8 R+RL+C++ Sbjct: 281 RNRLICRR 288>NP_001186346 Length = 1491 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SRLLCKQA 9 SRL C+QA Sbjct: 280 SRLECQQA 287>NP_001138866 Length = 406 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 RSRLLCKQ 8 R+RL+C++ Sbjct: 222 RNRLICRR 229>NP_001138864 Length = 465 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 RSRLLCKQ 8 R+RL+C++ Sbjct: 281 RNRLICRR 288>NP_006030 Length = 1479 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 RSRLLCKQA 9 R+R +C+Q+ Sbjct: 639 RARYICRQS 647>NP_476499 Length = 303 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RSRLLCKQA 9 RSR LC ++ Sbjct: 44 RSRCLCSES 52>XP_006725396 Length = 1144 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SRLLCKQA 9 SRL C+QA Sbjct: 280 SRLECQQA 287>XP_006725395 Length = 1249 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SRLLCKQA 9 SRL C+QA Sbjct: 280 SRLECQQA 287>XP_006725394 Length = 1408 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SRLLCKQA 9 SRL C+QA Sbjct: 280 SRLECQQA 287>XP_006725393 Length = 1473 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SRLLCKQA 9 SRL C+QA Sbjct: 262 SRLECQQA 269>XP_006722057 Length = 1144 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SRLLCKQA 9 SRL C+QA Sbjct: 280 SRLECQQA 287>XP_006722056 Length = 1249 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SRLLCKQA 9 SRL C+QA Sbjct: 280 SRLECQQA 287>XP_006722055 Length = 1408 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SRLLCKQA 9 SRL C+QA Sbjct: 280 SRLECQQA 287>XP_006722054 Length = 1473 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SRLLCKQA 9 SRL C+QA Sbjct: 262 SRLECQQA 269>XP_005265556 Length = 373 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 RSRLLCKQ 8 R+RL+C++ Sbjct: 281 RNRLICRR 288>XP_005265552 Length = 465 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 RSRLLCKQ 8 R+RL+C++ Sbjct: 281 RNRLICRR 288>NP_001243297 Length = 102 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LLCKQA 9 LLC+QA Sbjct: 20 LLCRQA 25>NP_001032370 Length = 379 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 RSRLLCKQA 9 + +LCK+A Sbjct: 233 KEHMLCKEA 241>NP_443749 Length = 411 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 RSRLLCKQA 9 + +LCK+A Sbjct: 265 KEHMLCKEA 273>NP_005873 Length = 355 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SRLLCK 7 SRL+CK Sbjct: 295 SRLVCK 300>NP_001017405 Length = 396 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SRLLCK 7 SRL+CK Sbjct: 336 SRLVCK 341>NP_110379 Length = 556 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RLLCKQA 9 RL CK+A Sbjct: 122 RLACKEA 128>NP_001264058 Length = 1004 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RLLCKQ 8 RLLCK+ Sbjct: 959 RLLCKR 964>NP_001258857 Length = 1304 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LLCKQA 9 LLCK+A Sbjct: 15 LLCKEA 20>NP_001258856 Length = 1335 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LLCKQA 9 LLCK+A Sbjct: 15 LLCKEA 20>NP_002603 Length = 411 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 SRLLCKQ 8 SR+LC Q Sbjct: 211 SRMLCDQ 217>NP_060046 Length = 1401 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LLCKQA 9 LLCK+A Sbjct: 15 LLCKEA 20>NP_835258 Length = 397 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SRLLCK 7 SRL+CK Sbjct: 137 SRLVCK 142>NP_055379 Length = 402 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SRLLCK 7 SRL+CK Sbjct: 142 SRLVCK 147>NP_001264055 Length = 1062 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RLLCKQ 8 RLLCK+ Sbjct: 1017 RLLCKR 1022>NP_653288 Length = 1061 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RLLCKQ 8 RLLCK+ Sbjct: 1016 RLLCKR 1021>XP_005263467 Length = 386 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SRLLCK 7 SRL+CK Sbjct: 126 SRLVCK 131>XP_006717241 Length = 1136 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LLCKQA 9 LLCK+A Sbjct: 15 LLCKEA 20>XP_006717240 Length = 1235 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LLCKQA 9 LLCK+A Sbjct: 15 LLCKEA 20>XP_005252147 Length = 1329 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LLCKQA 9 LLCK+A Sbjct: 15 LLCKEA 20>XP_005252146 Length = 1342 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LLCKQA 9 LLCK+A Sbjct: 15 LLCKEA 20>XP_006717239 Length = 1401 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LLCKQA 9 LLCK+A Sbjct: 15 LLCKEA 20>XP_005272028 Length = 619 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RLLCKQA 9 R LCKQ+ Sbjct: 316 RYLCKQS 322>XP_005272027 Length = 619 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RLLCKQA 9 R LCKQ+ Sbjct: 316 RYLCKQS 322>XP_005272026 Length = 619 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RLLCKQA 9 R LCKQ+ Sbjct: 316 RYLCKQS 322>XP_005272025 Length = 619 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RLLCKQA 9 R LCKQ+ Sbjct: 316 RYLCKQS 322>XP_005272024 Length = 619 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RLLCKQA 9 R LCKQ+ Sbjct: 316 RYLCKQS 322>XP_005272300 Length = 395 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SRLLCK 7 SRL+CK Sbjct: 335 SRLVCK 340>XP_006713914 Length = 402 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SRLLCK 7 SRL+CK Sbjct: 288 SRLVCK 293>XP_006713913 Length = 449 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SRLLCK 7 SRL+CK Sbjct: 335 SRLVCK 340>XP_006713912 Length = 450 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SRLLCK 7 SRL+CK Sbjct: 336 SRLVCK 341>NP_001017372 Length = 619 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RLLCKQA 9 R LCKQ+ Sbjct: 316 RYLCKQS 322>NP_054750 Length = 619 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RLLCKQA 9 R LCKQ+ Sbjct: 316 RYLCKQS 322Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.335 0.133 0.399 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 657,427 Number of extensions: 784 Number of successful extensions: 66 Number of sequences better than 10000.0: 66 Number of HSP's gapped: 66 Number of HSP's successfully gapped: 66 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.4 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |