Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 21 229 XP_006718908 21 229 XP_005271621 21 229 XP_006718907 21 229 XP_006718906 21 229 XP_005271619 21 229 XP_005271618 21 229 NP_001119576 17 3301 NP_037409 17 3301 NP_001119575 17 3301 XP_006719423 17 3301 XP_006719422 17 3301 XP_005268873 17 3301 XP_005268872 17 3301 XP_005268870 17 3301 XP_005268871 17 3301 XP_005268869 17 3301 XP_005268868 17 3301 NP_689484 16 5631 XP_005273742 16 5631 NP_002408 16 7355 NP_001139438 16 7355 NP_057191 16 7355 NP_079460 16 7355 XP_006724625 16 7355 XP_006724624 16 7355 XP_005272728 16 7355 XP_006717927 16 7355 XP_006714540 16 7355 NP_001933 15 9605 NP_001017423 15 9605 NP_002851 15 9605 NP_055872 15 9605 NP_078813 15 9605 NP_085126 15 9605 NP_001136116 15 9605 NP_055464 15 9605 NP_003137 15 9605 XP_005259745 15 9605 XP_006720016 15 9605 XP_006719852 15 9605 XP_005266357 15 9605 XP_006719851 15 9605 XP_006719850 15 9605 XP_006719849 15 9605 XP_006719848 15 9605 XP_005266356 15 9605 XP_006719847 15 9605 XP_006719846 15 9605 XP_006719845 15 9605 XP_006719844 15 9605 XP_006719843 15 9605 XP_006719842 15 9605 XP_005274251 15 9605 XP_006717996 15 9605 XP_005246927 15 9605 XP_005246925 15 9605 XP_006712841 15 9605 XP_005246924 15 9605 XP_006712840 15 9605>NP_000042 Length = 3056 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RSRITKNMP 9 RSRITKN+P Sbjct: 2580 RSRITKNVP 2588>XP_006718908 Length = 1708 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RSRITKNMP 9 RSRITKN+P Sbjct: 1232 RSRITKNVP 1240>XP_005271621 Length = 2708 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RSRITKNMP 9 RSRITKN+P Sbjct: 2232 RSRITKNVP 2240>XP_006718907 Length = 3050 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RSRITKNMP 9 RSRITKN+P Sbjct: 2574 RSRITKNVP 2582>XP_006718906 Length = 3056 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RSRITKNMP 9 RSRITKN+P Sbjct: 2580 RSRITKNVP 2588>XP_005271619 Length = 3056 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RSRITKNMP 9 RSRITKN+P Sbjct: 2580 RSRITKNVP 2588>XP_005271618 Length = 3056 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RSRITKNMP 9 RSRITKN+P Sbjct: 2580 RSRITKNVP 2588>NP_001119576 Length = 632 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RSRITKNMP 9 RS +TKN P Sbjct: 599 RSTLTKNTP 607>NP_037409 Length = 632 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RSRITKNMP 9 RS +TKN P Sbjct: 599 RSTLTKNTP 607>NP_001119575 Length = 632 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RSRITKNMP 9 RS +TKN P Sbjct: 599 RSTLTKNTP 607>XP_006719423 Length = 632 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RSRITKNMP 9 RS +TKN P Sbjct: 599 RSTLTKNTP 607>XP_006719422 Length = 632 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RSRITKNMP 9 RS +TKN P Sbjct: 599 RSTLTKNTP 607>XP_005268873 Length = 632 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RSRITKNMP 9 RS +TKN P Sbjct: 599 RSTLTKNTP 607>XP_005268872 Length = 632 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RSRITKNMP 9 RS +TKN P Sbjct: 599 RSTLTKNTP 607>XP_005268870 Length = 632 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RSRITKNMP 9 RS +TKN P Sbjct: 599 RSTLTKNTP 607>XP_005268871 Length = 632 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RSRITKNMP 9 RS +TKN P Sbjct: 599 RSTLTKNTP 607>XP_005268869 Length = 632 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RSRITKNMP 9 RS +TKN P Sbjct: 599 RSTLTKNTP 607>XP_005268868 Length = 651 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RSRITKNMP 9 RS +TKN P Sbjct: 618 RSTLTKNTP 626>NP_689484 Length = 773 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SRITKNMP 9 S +TKN+P Sbjct: 562 SHLTKNVP 569>XP_005273742 Length = 762 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SRITKNMP 9 S +TKN+P Sbjct: 551 SHLTKNVP 558>NP_002408 Length = 3256 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RSRITKNMP 9 RSR TK+ P Sbjct: 3201 RSRKTKSQP 3209>NP_001139438 Length = 2896 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RSRITKNMP 9 RSR TK+ P Sbjct: 2841 RSRKTKSQP 2849>NP_057191 Length = 1074 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SRITKNMP 9 SRI +N+P Sbjct: 822 SRIAENLP 829>NP_079460 Length = 749 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RSRITKNMP 9 RS++ KN P Sbjct: 281 RSKLPKNCP 289>XP_006724625 Length = 553 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RSRITKNMP 9 RS++ KN P Sbjct: 85 RSKLPKNCP 93>XP_006724624 Length = 673 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RSRITKNMP 9 RS++ KN P Sbjct: 205 RSKLPKNCP 213>XP_005272728 Length = 718 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RSRITKNMP 9 RS++ KN P Sbjct: 281 RSKLPKNCP 289>XP_006717927 Length = 2406 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RSRITKNMP 9 RSR TK+ P Sbjct: 2351 RSRKTKSQP 2359>XP_006714540 Length = 1030 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SRITKNMP 9 SRI +N+P Sbjct: 778 SRIAENLP 785>NP_001933 Length = 1049 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RSRITK 6 RSRITK Sbjct: 1036 RSRITK 1041>NP_001017423 Length = 793 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RSRITKNM 8 R+RI KN+ Sbjct: 455 RTRIAKNL 462>NP_002851 Length = 795 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RSRITKNM 8 R+RI KN+ Sbjct: 457 RTRIAKNL 464>NP_055872 Length = 4678 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SRITKN 7 SR+TKN Sbjct: 4192 SRVTKN 4197>NP_078813 Length = 564 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 RITKNMP 9 R+T+N+P Sbjct: 164 RVTENIP 170>NP_085126 Length = 1671 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SRITKNMP 9 SR+T N+P Sbjct: 1247 SRLTVNVP 1254>NP_001136116 Length = 1700 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SRITKNMP 9 SR+T N+P Sbjct: 1247 SRLTVNVP 1254>NP_055464 Length = 953 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RSRITKN 7 RSR+TK+ Sbjct: 557 RSRVTKS 563>NP_003137 Length = 709 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RITKNM 8 R+TKNM Sbjct: 301 RLTKNM 306>XP_005259745 Length = 499 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RSRITKN 7 RSR+TK+ Sbjct: 103 RSRVTKS 109>XP_006720016 Length = 451 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 RITKNMP 9 R+T+N+P Sbjct: 51 RVTENIP 57>XP_006719852 Length = 4752 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SRITKN 7 SR+TKN Sbjct: 4266 SRVTKN 4271>XP_005266357 Length = 4600 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SRITKN 7 SR+TKN Sbjct: 4114 SRVTKN 4119>XP_006719851 Length = 4689 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SRITKN 7 SR+TKN Sbjct: 4203 SRVTKN 4208>XP_006719850 Length = 4697 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SRITKN 7 SR+TKN Sbjct: 4211 SRVTKN 4216>XP_006719849 Length = 4703 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SRITKN 7 SR+TKN Sbjct: 4217 SRVTKN 4222>XP_006719848 Length = 4737 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SRITKN 7 SR+TKN Sbjct: 4251 SRVTKN 4256>XP_005266356 Length = 4755 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SRITKN 7 SR+TKN Sbjct: 4269 SRVTKN 4274>XP_006719847 Length = 4761 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SRITKN 7 SR+TKN Sbjct: 4275 SRVTKN 4280>XP_006719846 Length = 4763 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SRITKN 7 SR+TKN Sbjct: 4277 SRVTKN 4282>XP_006719845 Length = 4772 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SRITKN 7 SR+TKN Sbjct: 4286 SRVTKN 4291>XP_006719844 Length = 4789 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SRITKN 7 SR+TKN Sbjct: 4303 SRVTKN 4308>XP_006719843 Length = 4794 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SRITKN 7 SR+TKN Sbjct: 4308 SRVTKN 4313>XP_006719842 Length = 4797 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SRITKN 7 SR+TKN Sbjct: 4311 SRVTKN 4316>XP_005274251 Length = 712 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RITKNM 8 R+TKNM Sbjct: 301 RLTKNM 306>XP_006717996 Length = 795 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RSRITKNM 8 R+RI KN+ Sbjct: 457 RTRIAKNL 464>XP_005246927 Length = 1683 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SRITKNMP 9 SR+T N+P Sbjct: 1230 SRLTVNVP 1237>XP_005246925 Length = 1696 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SRITKNMP 9 SR+T N+P Sbjct: 1243 SRLTVNVP 1250>XP_006712841 Length = 1696 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SRITKNMP 9 SR+T N+P Sbjct: 1272 SRLTVNVP 1279>XP_005246924 Length = 1713 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SRITKNMP 9 SR+T N+P Sbjct: 1260 SRLTVNVP 1267>XP_006712840 Length = 1725 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SRITKNMP 9 SR+T N+P Sbjct: 1272 SRLTVNVP 1279Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.319 0.126 0.352 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 413,025 Number of extensions: 656 Number of successful extensions: 60 Number of sequences better than 10000.0: 60 Number of HSP's gapped: 60 Number of HSP's successfully gapped: 60 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |