Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_055365 18 1135 XP_005269076 17 4312 NP_001166935 16 7355 NP_057726 16 7355 NP_060111 16 7355 NP_001166934 16 7355 NP_001166936 16 7355 XP_005254495 16 7355 XP_006719559 16 7355 XP_006719558 16 7355 XP_005269072 16 7355 XP_005269071 16 7355 XP_005269070 16 7355 XP_006719557 16 7355 XP_005269069 16 7355 XP_006719556 16 7355 XP_005269068 16 7355 XP_005269067 16 7355 XP_005269066 16 7355 XP_005269065 16 7355 XP_005269064 16 7355 NP_001079990 16 7355 NP_036469 15 9605 NP_001018008 15 9605 NP_001008723 15 9605 NP_001276332 15 9605 NP_001276334 15 9605 NP_071757 15 9605 NP_665803 15 9605 XP_005274634 15 9605 XP_005274633 15 9605 XP_005254710 15 9605 XP_005254709 15 9605 XP_005254708 15 9605 XP_005254707 15 9605 XP_005254706 15 9605 XP_005254705 15 9605 XP_005254704 15 9605 XP_005254703 15 9605 XP_006718007 15 9605>NP_055365 Length = 1032 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 SRIRAIQE 9 SRIRAIQE Sbjct: 906 SRIRAIQE 913>XP_005269076 Length = 368 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 SRIRAIQE 9 SRIRA++E Sbjct: 6 SRIRAVRE 13>NP_001166935 Length = 1674 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RSRIRAIQE 9 R RI+A+QE Sbjct: 436 RVRIKAMQE 444>NP_057726 Length = 3674 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RSRIRAIQE 9 R ++RA+QE Sbjct: 1709 REQLRALQE 1717>NP_060111 Length = 1661 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RSRIRAIQE 9 R RI+A+QE Sbjct: 436 RVRIKAMQE 444>NP_001166934 Length = 1637 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RSRIRAIQE 9 R RI+A+QE Sbjct: 436 RVRIKAMQE 444>NP_001166936 Length = 1621 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RSRIRAIQE 9 R RI+A+QE Sbjct: 436 RVRIKAMQE 444>XP_005254495 Length = 3694 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RSRIRAIQE 9 R ++RA+QE Sbjct: 1729 REQLRALQE 1737>XP_006719559 Length = 1650 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RSRIRAIQE 9 R RI+A+QE Sbjct: 436 RVRIKAMQE 444>XP_006719558 Length = 1644 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RSRIRAIQE 9 R RI+A+QE Sbjct: 436 RVRIKAMQE 444>XP_005269072 Length = 1607 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RSRIRAIQE 9 R RI+A+QE Sbjct: 436 RVRIKAMQE 444>XP_005269071 Length = 1614 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RSRIRAIQE 9 R RI+A+QE Sbjct: 436 RVRIKAMQE 444>XP_005269070 Length = 1627 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RSRIRAIQE 9 R RI+A+QE Sbjct: 436 RVRIKAMQE 444>XP_006719557 Length = 1631 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RSRIRAIQE 9 R RI+A+QE Sbjct: 436 RVRIKAMQE 444>XP_005269069 Length = 1632 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RSRIRAIQE 9 R RI+A+QE Sbjct: 436 RVRIKAMQE 444>XP_006719556 Length = 1655 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RSRIRAIQE 9 R RI+A+QE Sbjct: 436 RVRIKAMQE 444>XP_005269068 Length = 1657 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RSRIRAIQE 9 R RI+A+QE Sbjct: 436 RVRIKAMQE 444>XP_005269067 Length = 1662 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RSRIRAIQE 9 R RI+A+QE Sbjct: 436 RVRIKAMQE 444>XP_005269066 Length = 1668 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RSRIRAIQE 9 R RI+A+QE Sbjct: 436 RVRIKAMQE 444>XP_005269065 Length = 1670 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RSRIRAIQE 9 R RI+A+QE Sbjct: 436 RVRIKAMQE 444>XP_005269064 Length = 1675 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RSRIRAIQE 9 R RI+A+QE Sbjct: 436 RVRIKAMQE 444>NP_001079990 Length = 74 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RSRIRAIQE 9 RSR+RA E Sbjct: 12 RSRLRAFPE 20>NP_036469 Length = 551 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SRIRAIQE 9 +R+RA+QE Sbjct: 370 ARLRAMQE 377>NP_001018008 Length = 245 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RSRIRAIQE 9 R +IR++QE Sbjct: 11 RRKIRSLQE 19>NP_001008723 Length = 872 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RSRIRAIQE 9 R+R RA++E Sbjct: 694 RTRCRALEE 702>NP_001276332 Length = 987 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RSRIRAIQ 8 R+R RAIQ Sbjct: 63 RTRARAIQ 70>NP_001276334 Length = 1030 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RSRIRAIQ 8 R+R RAIQ Sbjct: 63 RTRARAIQ 70>NP_071757 Length = 1030 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RSRIRAIQ 8 R+R RAIQ Sbjct: 63 RTRARAIQ 70>NP_665803 Length = 1025 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RSRIRAIQE 9 R+R +A+QE Sbjct: 711 RTRTKALQE 719>XP_005274634 Length = 710 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RIRAIQE 9 R+R+IQE Sbjct: 8 RVRSIQE 14>XP_005274633 Length = 711 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RIRAIQE 9 R+R+IQE Sbjct: 8 RVRSIQE 14>XP_005254710 Length = 245 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RSRIRAIQE 9 R +IR++QE Sbjct: 11 RRKIRSLQE 19>XP_005254709 Length = 248 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RSRIRAIQE 9 R +IR++QE Sbjct: 11 RRKIRSLQE 19>XP_005254708 Length = 248 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RSRIRAIQE 9 R +IR++QE Sbjct: 11 RRKIRSLQE 19>XP_005254707 Length = 248 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RSRIRAIQE 9 R +IR++QE Sbjct: 11 RRKIRSLQE 19>XP_005254706 Length = 248 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RSRIRAIQE 9 R +IR++QE Sbjct: 11 RRKIRSLQE 19>XP_005254705 Length = 248 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RSRIRAIQE 9 R +IR++QE Sbjct: 11 RRKIRSLQE 19>XP_005254704 Length = 251 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RSRIRAIQE 9 R +IR++QE Sbjct: 11 RRKIRSLQE 19>XP_005254703 Length = 275 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RSRIRAIQE 9 R +IR++QE Sbjct: 11 RRKIRSLQE 19>XP_006718007 Length = 1050 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RSRIRAIQ 8 R+R RAIQ Sbjct: 84 RTRARAIQ 91Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.330 0.135 0.322 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 343,581 Number of extensions: 526 Number of successful extensions: 40 Number of sequences better than 10000.0: 40 Number of HSP's gapped: 40 Number of HSP's successfully gapped: 40 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |