Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_002430 20 509 XP_006726471 17 4312 XP_006710212 17 4312 NP_055504 16 7355 NP_001277192 16 7355 NP_006627 16 7355 NP_789784 16 7355 NP_065928 16 7355 NP_001138450 16 7355 XP_005256527 16 7355 XP_005250238 16 7355 XP_005250236 16 7355 XP_006715932 16 7355 XP_006715931 16 7355 XP_006715930 16 7355 XP_005265749 16 7355 XP_005265748 16 7355 XP_005265747 16 7355 XP_006712687 16 7355 XP_006712686 16 7355 XP_006712685 16 7355 XP_006712684 16 7355 XP_006712683 16 7355 XP_006712682 16 7355 XP_006712681 16 7355 XP_005246730 16 7355 XP_005246729 16 7355 XP_006712680 16 7355 XP_006712679 16 7355 XP_006711987 16 7355 NP_000436 15 9605 NP_958780 15 9605 NP_958781 15 9605 NP_958785 15 9605 NP_958783 15 9605 NP_958786 15 9605 NP_073572 15 9605 NP_958782 15 9605 NP_958784 15 9605 NP_006157 15 9605 XP_005268966 15 9605 XP_005268967 15 9605 XP_005268965 15 9605 XP_006716654 15 9605 XP_005251041 15 9605 XP_005251040 15 9605 XP_006716653 15 9605 XP_006716652 15 9605 XP_005251039 15 9605 XP_005251038 15 9605 XP_005251036 15 9605 XP_005251037 15 9605 XP_005251035 15 9605 XP_006716651 15 9605 XP_005251034 15 9605 XP_005251033 15 9605>NP_002430 Length = 1137 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RSKSIYMPL 9 RSKSIY PL Sbjct: 224 RSKSIYTPL 232>XP_006726471 Length = 249 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RSKSIYMPL 9 RS+++Y PL Sbjct: 116 RSRTLYCPL 124>XP_006710212 Length = 249 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RSKSIYMPL 9 RS+++Y PL Sbjct: 116 RSRTLYCPL 124>NP_055504 Length = 2186 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SIYMPL 9 S+YMPL Sbjct: 1203 SLYMPL 1208>NP_001277192 Length = 2180 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SIYMPL 9 S+YMPL Sbjct: 1197 SLYMPL 1202>NP_006627 Length = 350 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RSKSIYMPL 9 RSK++ MP+ Sbjct: 201 RSKNVGMPI 209>NP_789784 Length = 664 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RSKSIYMPL 9 RSK++ +PL Sbjct: 277 RSKNVLVPL 285>NP_065928 Length = 4427 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 RSKSIYMP 8 R+K +Y+P Sbjct: 2465 RTKGVYVP 2472>NP_001138450 Length = 347 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RSKSIYMPL 9 RSK++ MP+ Sbjct: 215 RSKNVGMPI 223>XP_005256527 Length = 4427 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 RSKSIYMP 8 R+K +Y+P Sbjct: 2465 RTKGVYVP 2472>XP_005250238 Length = 664 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RSKSIYMPL 9 RSK++ +PL Sbjct: 277 RSKNVLVPL 285>XP_005250236 Length = 665 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RSKSIYMPL 9 RSK++ +PL Sbjct: 277 RSKNVLVPL 285>XP_006715932 Length = 694 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RSKSIYMPL 9 RSK++ +PL Sbjct: 245 RSKNVLVPL 253>XP_006715931 Length = 726 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RSKSIYMPL 9 RSK++ +PL Sbjct: 277 RSKNVLVPL 285>XP_006715930 Length = 726 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RSKSIYMPL 9 RSK++ +PL Sbjct: 277 RSKNVLVPL 285>XP_005265749 Length = 295 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RSKSIYMPL 9 RSK++ MP+ Sbjct: 157 RSKNVGMPI 165>XP_005265748 Length = 295 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RSKSIYMPL 9 RSK++ MP+ Sbjct: 157 RSKNVGMPI 165>XP_005265747 Length = 295 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RSKSIYMPL 9 RSK++ MP+ Sbjct: 157 RSKNVGMPI 165>XP_006712687 Length = 2166 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SIYMPL 9 S+YMPL Sbjct: 1216 SLYMPL 1221>XP_006712686 Length = 2173 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SIYMPL 9 S+YMPL Sbjct: 1216 SLYMPL 1221>XP_006712685 Length = 2175 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SIYMPL 9 S+YMPL Sbjct: 1216 SLYMPL 1221>XP_006712684 Length = 2189 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SIYMPL 9 S+YMPL Sbjct: 1197 SLYMPL 1202>XP_006712683 Length = 2195 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SIYMPL 9 S+YMPL Sbjct: 1203 SLYMPL 1208>XP_006712682 Length = 2199 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SIYMPL 9 S+YMPL Sbjct: 1216 SLYMPL 1221>XP_006712681 Length = 2199 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SIYMPL 9 S+YMPL Sbjct: 1216 SLYMPL 1221>XP_005246730 Length = 2199 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SIYMPL 9 S+YMPL Sbjct: 1216 SLYMPL 1221>XP_005246729 Length = 2201 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SIYMPL 9 S+YMPL Sbjct: 1216 SLYMPL 1221>XP_006712680 Length = 2206 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SIYMPL 9 S+YMPL Sbjct: 1216 SLYMPL 1221>XP_006712679 Length = 2208 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SIYMPL 9 S+YMPL Sbjct: 1216 SLYMPL 1221>XP_006711987 Length = 248 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RSKSIYMPL 9 RSK++ MP+ Sbjct: 99 RSKNVGMPI 107>NP_000436 Length = 4574 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RSKSIYMPL 9 RSK IY L Sbjct: 365 RSKGIYQSL 373>NP_958780 Length = 4533 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RSKSIYMPL 9 RSK IY L Sbjct: 324 RSKGIYQSL 332>NP_958781 Length = 4525 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RSKSIYMPL 9 RSK IY L Sbjct: 316 RSKGIYQSL 324>NP_958785 Length = 4551 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RSKSIYMPL 9 RSK IY L Sbjct: 342 RSKGIYQSL 350>NP_958783 Length = 4515 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RSKSIYMPL 9 RSK IY L Sbjct: 306 RSKGIYQSL 314>NP_958786 Length = 4547 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RSKSIYMPL 9 RSK IY L Sbjct: 338 RSKGIYQSL 346>NP_073572 Length = 528 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RSKSIY 6 RSKS+Y Sbjct: 516 RSKSVY 521>NP_958782 Length = 4684 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RSKSIYMPL 9 RSK IY L Sbjct: 475 RSKGIYQSL 483>NP_958784 Length = 4547 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RSKSIYMPL 9 RSK IY L Sbjct: 338 RSKGIYQSL 346>NP_006157 Length = 207 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 RSKSIYMPL 9 R + IY+P+ Sbjct: 53 REQDIYLPI 61>XP_005268966 Length = 208 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 RSKSIYMPL 9 R + IY+P+ Sbjct: 54 REQDIYLPI 62>XP_005268967 Length = 208 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 RSKSIYMPL 9 R + IY+P+ Sbjct: 54 REQDIYLPI 62>XP_005268965 Length = 208 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 RSKSIYMPL 9 R + IY+P+ Sbjct: 54 REQDIYLPI 62>XP_006716654 Length = 3562 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RSKSIYMPL 9 RSK IY L Sbjct: 480 RSKGIYQSL 488>XP_005251041 Length = 4520 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RSKSIYMPL 9 RSK IY L Sbjct: 311 RSKGIYQSL 319>XP_005251040 Length = 4524 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RSKSIYMPL 9 RSK IY L Sbjct: 315 RSKGIYQSL 323>XP_006716653 Length = 4529 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RSKSIYMPL 9 RSK IY L Sbjct: 320 RSKGIYQSL 328>XP_006716652 Length = 4529 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RSKSIYMPL 9 RSK IY L Sbjct: 320 RSKGIYQSL 328>XP_005251039 Length = 4530 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RSKSIYMPL 9 RSK IY L Sbjct: 321 RSKGIYQSL 329>XP_005251038 Length = 4538 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RSKSIYMPL 9 RSK IY L Sbjct: 329 RSKGIYQSL 337>XP_005251036 Length = 4552 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RSKSIYMPL 9 RSK IY L Sbjct: 343 RSKGIYQSL 351>XP_005251037 Length = 4552 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RSKSIYMPL 9 RSK IY L Sbjct: 343 RSKGIYQSL 351>XP_005251035 Length = 4556 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RSKSIYMPL 9 RSK IY L Sbjct: 347 RSKGIYQSL 355>XP_006716651 Length = 4579 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RSKSIYMPL 9 RSK IY L Sbjct: 370 RSKGIYQSL 378>XP_005251034 Length = 4685 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RSKSIYMPL 9 RSK IY L Sbjct: 476 RSKGIYQSL 484>XP_005251033 Length = 4689 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RSKSIYMPL 9 RSK IY L Sbjct: 480 RSKGIYQSL 488Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.323 0.134 0.375 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 463,477 Number of extensions: 740 Number of successful extensions: 56 Number of sequences better than 10000.0: 56 Number of HSP's gapped: 56 Number of HSP's successfully gapped: 56 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |