Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_733751 19 869 XP_006716142 19 869 XP_005250088 19 869 XP_006716141 19 869 XP_005250085 19 869 XP_006716140 19 869 XP_005250084 19 869 XP_005250083 19 869 XP_005250082 19 869 XP_006726491 18 1135 XP_006715877 18 1135 XP_006710244 18 1135 NP_001243000 18 1482 NP_066005 18 1482 XP_005257603 18 1482 XP_006722058 18 1482 XP_005257602 18 1482 NP_542942 16 5631 XP_006725464 16 5631 XP_006725463 16 5631 XP_005277590 16 5631 XP_005261395 16 5631 NP_000294 15 9605 NP_079133 15 9605 NP_000238 15 9605 NP_001334 15 9605 NP_006805 15 9605 NP_848693 15 9605 NP_001231892 15 9605 NP_001136156 15 9605 NP_660093 15 9605 NP_001034739 15 9605 NP_001034738 15 9605 NP_004843 15 9605 NP_060480 15 9605 NP_892009 15 9605 NP_004489 15 9605 XP_006723727 15 9605 XP_005260931 15 9605 XP_005260930 15 9605 XP_005255429 15 9605 XP_005267824 15 9605 XP_005266651 15 9605 XP_006719957 15 9605 XP_005266650 15 9605 XP_005266578 15 9605 XP_006718428 15 9605 XP_006718427 15 9605 NP_059133 15 9605 NP_001073957 15 9605>NP_733751 Length = 4911 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 RSKLKSGI 8 RSKLKSGI Sbjct: 909 RSKLKSGI 916>XP_006716142 Length = 4927 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 RSKLKSGI 8 RSKLKSGI Sbjct: 910 RSKLKSGI 917>XP_005250088 Length = 4928 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 RSKLKSGI 8 RSKLKSGI Sbjct: 910 RSKLKSGI 917>XP_006716141 Length = 4959 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 RSKLKSGI 8 RSKLKSGI Sbjct: 910 RSKLKSGI 917>XP_005250085 Length = 4979 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 RSKLKSGI 8 RSKLKSGI Sbjct: 910 RSKLKSGI 917>XP_006716140 Length = 4982 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 RSKLKSGI 8 RSKLKSGI Sbjct: 910 RSKLKSGI 917>XP_005250084 Length = 4982 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 RSKLKSGI 8 RSKLKSGI Sbjct: 910 RSKLKSGI 917>XP_005250083 Length = 4982 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 RSKLKSGI 8 RSKLKSGI Sbjct: 909 RSKLKSGI 916>XP_005250082 Length = 4983 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 RSKLKSGI 8 RSKLKSGI Sbjct: 910 RSKLKSGI 917>XP_006726491 Length = 230 Score = 18.5 bits (36), Expect = 1135 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 RSKLKSGI 8 RSKLKSG+ Sbjct: 167 RSKLKSGV 174>XP_006715877 Length = 230 Score = 18.5 bits (36), Expect = 1135 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 RSKLKSGI 8 RSKLKSG+ Sbjct: 167 RSKLKSGV 174>XP_006710244 Length = 230 Score = 18.5 bits (36), Expect = 1135 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 RSKLKSGI 8 RSKLKSG+ Sbjct: 167 RSKLKSGV 174>NP_001243000 Length = 5207 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 RSKLKSGIV 9 RSKLK+G++ Sbjct: 617 RSKLKTGLI 625>NP_066005 Length = 1063 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 RSKLKSGIV 9 RSKLK+G++ Sbjct: 617 RSKLKTGLI 625>XP_005257603 Length = 5256 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 RSKLKSGIV 9 RSKLK+G++ Sbjct: 666 RSKLKTGLI 674>XP_006722058 Length = 5256 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 RSKLKSGIV 9 RSKLK+G++ Sbjct: 666 RSKLKTGLI 674>XP_005257602 Length = 5256 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 RSKLKSGIV 9 RSKLK+G++ Sbjct: 666 RSKLKTGLI 674>NP_542942 Length = 543 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RSKLKSGIV 9 R+KL+ GI+ Sbjct: 187 RAKLRDGII 195>XP_006725464 Length = 543 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RSKLKSGIV 9 R+KL+ GI+ Sbjct: 187 RAKLRDGII 195>XP_006725463 Length = 543 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RSKLKSGIV 9 R+KL+ GI+ Sbjct: 187 RAKLRDGII 195>XP_005277590 Length = 900 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RSKLKSGIV 9 RSK++SG + Sbjct: 151 RSKIRSGCI 159>XP_005261395 Length = 543 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RSKLKSGIV 9 R+KL+ GI+ Sbjct: 187 RAKLRDGII 195>NP_000294 Length = 246 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RSKLKSGIV 9 R K+K G+V Sbjct: 36 RQKIKIGVV 44>NP_079133 Length = 1844 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SKLKSG 7 SKLKSG Sbjct: 921 SKLKSG 926>NP_000238 Length = 383 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RSKLKSGIV 9 R LKSG+V Sbjct: 192 RRYLKSGVV 200>NP_001334 Length = 770 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SKLKSGI 8 +KLKSG+ Sbjct: 204 NKLKSGV 210>NP_006805 Length = 271 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RSKLKSGIV 9 RS++ SGI+ Sbjct: 131 RSRIVSGII 139>NP_848693 Length = 271 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RSKLKSGIV 9 RS++ SGI+ Sbjct: 131 RSRIVSGII 139>NP_001231892 Length = 2488 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SKLKSGI 8 SK+KSG+ Sbjct: 8 SKMKSGL 14>NP_001136156 Length = 669 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RSKLKSGI 8 RSK K+G+ Sbjct: 162 RSKTKTGV 169>NP_660093 Length = 2429 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SKLKSGI 8 SK+KSG+ Sbjct: 8 SKMKSGL 14>NP_001034739 Length = 382 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RSKLKSGI 8 RSK K+G+ Sbjct: 162 RSKTKTGV 169>NP_001034738 Length = 208 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RSKLKSGI 8 RSK K+G+ Sbjct: 162 RSKTKTGV 169>NP_004843 Length = 504 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SKLKSG 7 SKLKSG Sbjct: 379 SKLKSG 384>NP_060480 Length = 429 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SKLKSG 7 SKLKSG Sbjct: 134 SKLKSG 139>NP_892009 Length = 2432 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SKLKSGI 8 SK+KSG+ Sbjct: 8 SKMKSGL 14>NP_004489 Length = 465 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SKLKSG 7 SKLKSG Sbjct: 338 SKLKSG 343>XP_006723727 Length = 261 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RSKLKSGIV 9 RS++ SGI+ Sbjct: 131 RSRIVSGII 139>XP_005260931 Length = 263 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RSKLKSGIV 9 RS++ SGI+ Sbjct: 131 RSRIVSGII 139>XP_005260930 Length = 263 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RSKLKSGIV 9 RS++ SGI+ Sbjct: 131 RSRIVSGII 139>XP_005255429 Length = 270 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RSKLKSGIV 9 R K+K G+V Sbjct: 36 RQKIKIGVV 44>XP_005267824 Length = 782 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RSKLKSGI 8 +SKL+SG+ Sbjct: 497 KSKLESGL 504>XP_005266651 Length = 669 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RSKLKSGI 8 RSK K+G+ Sbjct: 162 RSKTKTGV 169>XP_006719957 Length = 669 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RSKLKSGI 8 RSK K+G+ Sbjct: 162 RSKTKTGV 169>XP_005266650 Length = 669 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RSKLKSGI 8 RSK K+G+ Sbjct: 162 RSKTKTGV 169>XP_005266578 Length = 1290 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RSKLKSGI 8 RSK K+G+ Sbjct: 162 RSKTKTGV 169>XP_006718428 Length = 2455 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SKLKSGI 8 SK+KSG+ Sbjct: 8 SKMKSGL 14>XP_006718427 Length = 2465 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SKLKSGI 8 SK+KSG+ Sbjct: 8 SKMKSGL 14>NP_059133 Length = 782 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RSKLKSGI 8 +SKL+SG+ Sbjct: 497 KSKLESGL 504>NP_001073957 Length = 494 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SKLKSG 7 SKLKSG Sbjct: 367 SKLKSG 372Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.313 0.132 0.319 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 467,344 Number of extensions: 670 Number of successful extensions: 50 Number of sequences better than 10000.0: 50 Number of HSP's gapped: 50 Number of HSP's successfully gapped: 50 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |