Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005091 19 665 NP_653080 19 665 XP_005267292 19 665 XP_005267291 19 665 XP_005267290 19 665 NP_056023 18 1935 NP_001190985 18 1935 NP_001077094 18 1935 XP_005258153 18 1935 XP_005258152 18 1935 XP_005258151 18 1935 XP_005258150 18 1935 XP_005258149 18 1935 NP_001131140 17 4312 NP_036247 17 4312 NP_006725 17 4312 NP_003892 17 4312 NP_001131139 17 4312 XP_006718116 17 4312 XP_006718115 17 4312 XP_005270320 17 4312 XP_005267014 17 4312 NP_072179 16 7355 NP_002881 16 7355 NP_001094089 16 7355 NP_612384 16 7355 NP_001243367 16 7355 NP_001098998 16 7355 NP_945346 16 7355 NP_112492 16 7355 NP_114102 16 7355 XP_005259182 16 7355 XP_006722639 16 7355 XP_006722638 16 7355 NP_001138764 15 9605 NP_065681 15 9605 NP_066124 15 9605 NP_001164163 15 9605 NP_000274 15 9605 NP_001138763 15 9605 NP_995586 15 9605 NP_001164164 15 9605 NP_061833 15 9605 XP_006717999 15 9605 XP_005272337 15 9605 XP_005272336 15 9605>NP_005091 Length = 1782 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 SDISKDMS 9 SDISKDMS Sbjct: 1628 SDISKDMS 1635>NP_653080 Length = 1684 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 SDISKDMS 9 SDISKDMS Sbjct: 1530 SDISKDMS 1537>XP_005267292 Length = 1677 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 SDISKDMS 9 SDISKDMS Sbjct: 1523 SDISKDMS 1530>XP_005267291 Length = 1684 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 SDISKDMS 9 SDISKDMS Sbjct: 1530 SDISKDMS 1537>XP_005267290 Length = 1782 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 SDISKDMS 9 SDISKDMS Sbjct: 1628 SDISKDMS 1635>NP_056023 Length = 2062 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RSDISKDM 8 RSD+SK+M Sbjct: 45 RSDVSKEM 52>NP_001190985 Length = 2039 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RSDISKDM 8 RSD+SK+M Sbjct: 45 RSDVSKEM 52>NP_001077094 Length = 2039 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RSDISKDM 8 RSD+SK+M Sbjct: 45 RSDVSKEM 52>XP_005258153 Length = 2037 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RSDISKDM 8 RSD+SK+M Sbjct: 45 RSDVSKEM 52>XP_005258152 Length = 2060 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RSDISKDM 8 RSD+SK+M Sbjct: 45 RSDVSKEM 52>XP_005258151 Length = 2062 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RSDISKDM 8 RSD+SK+M Sbjct: 45 RSDVSKEM 52>XP_005258150 Length = 2062 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RSDISKDM 8 RSD+SK+M Sbjct: 45 RSDVSKEM 52>XP_005258149 Length = 2062 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RSDISKDM 8 RSD+SK+M Sbjct: 45 RSDVSKEM 52>NP_001131140 Length = 1982 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RSDISKDM 8 +SD+SKD+ Sbjct: 182 KSDVSKDV 189>NP_036247 Length = 1982 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RSDISKDM 8 +SD+SKD+ Sbjct: 182 KSDVSKDV 189>NP_006725 Length = 2446 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SDISKDMS 9 SDI KD+S Sbjct: 1481 SDIKKDLS 1488>NP_003892 Length = 568 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RSDISKDMS 9 + DISK+MS Sbjct: 96 KDDISKNMS 104>NP_001131139 Length = 1982 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RSDISKDM 8 +SD+SKD+ Sbjct: 182 KSDVSKDV 189>XP_006718116 Length = 488 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RSDISKDMS 9 + DISK+MS Sbjct: 16 KDDISKNMS 24>XP_006718115 Length = 567 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RSDISKDMS 9 + DISK+MS Sbjct: 95 KDDISKNMS 103>XP_005270320 Length = 568 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RSDISKDMS 9 + DISK+MS Sbjct: 96 KDDISKNMS 104>XP_005267014 Length = 2446 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SDISKDMS 9 SDI KD+S Sbjct: 1481 SDIKKDLS 1488>NP_072179 Length = 870 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 RSDISKDMS 9 R+D+S+D++ Sbjct: 811 RTDLSRDLA 819>NP_002881 Length = 1047 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 RSDISKDMS 9 R+D+S+D++ Sbjct: 988 RTDLSRDLA 996>NP_001094089 Length = 633 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SDISKDMS 9 SD+ KDM+ Sbjct: 492 SDLKKDMN 499>NP_612384 Length = 368 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SDISKDMS 9 SD+ KDM+ Sbjct: 227 SDLKKDMN 234>NP_001243367 Length = 306 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SDISKDMS 9 SD+ KDM+ Sbjct: 165 SDLKKDMN 172>NP_001098998 Length = 867 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SDISKDMS 9 SD++KD S Sbjct: 433 SDVAKDFS 440>NP_945346 Length = 829 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SDISKDMS 9 SD++KD S Sbjct: 433 SDVAKDFS 440>NP_112492 Length = 478 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SDISKDMS 9 SD+ KDM+ Sbjct: 338 SDLKKDMN 345>NP_114102 Length = 275 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SDISKDMS 9 SDIS D+S Sbjct: 244 SDISSDVS 251>XP_005259182 Length = 275 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SDISKDMS 9 SDIS D+S Sbjct: 244 SDISSDVS 251>XP_006722639 Length = 365 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SDISKDMS 9 SD+ KDM+ Sbjct: 224 SDLKKDMN 231>XP_006722638 Length = 607 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SDISKDMS 9 SD+ KDM+ Sbjct: 466 SDLKKDMN 473>NP_001138764 Length = 575 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RSDISKDM 8 R DI++DM Sbjct: 165 RKDIAQDM 172>NP_065681 Length = 1072 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SDISKDM 8 +DISKD+ Sbjct: 999 ADISKDL 1005>NP_066124 Length = 1114 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SDISKDM 8 +DISKD+ Sbjct: 999 ADISKDL 1005>NP_001164163 Length = 839 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RSDISKD 7 +SDI+KD Sbjct: 577 KSDITKD 583>NP_000274 Length = 854 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RSDISKDM 8 R DI++DM Sbjct: 444 RKDIAQDM 451>NP_001138763 Length = 853 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RSDISKDM 8 R DI++DM Sbjct: 444 RKDIAQDM 451>NP_995586 Length = 641 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RSDISKD 7 +SDI+KD Sbjct: 441 KSDITKD 447>NP_001164164 Length = 824 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RSDISKD 7 +SDI+KD Sbjct: 577 KSDITKD 583>NP_061833 Length = 295 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 RSDISKDMS 9 +SD++KD++ Sbjct: 198 KSDLTKDVT 206>XP_006717999 Length = 1207 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SDISKDM 8 +DISKD+ Sbjct: 1092 ADISKDL 1098>XP_005272337 Length = 589 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RSDISKDM 8 R DI++DM Sbjct: 165 RKDIAQDM 172>XP_005272336 Length = 589 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RSDISKDM 8 R DI++DM Sbjct: 165 RKDIAQDM 172Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.303 0.115 0.275 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 520,370 Number of extensions: 1025 Number of successful extensions: 46 Number of sequences better than 10000.0: 46 Number of HSP's gapped: 46 Number of HSP's successfully gapped: 46 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |