Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_005179                                                              18    1135
NP_001180451                                                           18    1935
NP_001180453                                                           18    1935
NP_001180452                                                           18    1935
NP_078795                                                              18    1935
XP_006721333                                                           18    1935
XP_006721332                                                           18    1935
NP_001276090                                                           17    2528
NP_001276089                                                           17    2528
NP_005922                                                              17    2528
XP_006726158                                                           17    2528
XP_006726065                                                           17    2528
NP_004360                                                              17    4312
NP_848552                                                              17    4312
XP_005260332                                                           17    4312
XP_005260331                                                           17    4312
XP_005260330                                                           17    4312
XP_006723761                                                           17    4312
XP_005260329                                                           17    4312
XP_005246782                                                           17    4312
XP_005246780                                                           17    4312
XP_005246776                                                           17    4312
XP_006712723                                                           17    4312
XP_006712722                                                           17    4312
XP_005246775                                                           17    4312
XP_005246122                                                           17    4312
XP_006712316                                                           17    4312
NP_008958                                                              16    5631
NP_000612                                                              16    5631
NP_001159419                                                           16    5631
NP_001438                                                              16    7355
NP_055309                                                              16    7355
NP_061862                                                              16    7355
XP_006721103                                                           16    7355
XP_005255314                                                           16    7355
XP_006721102                                                           16    7355
XP_005255313                                                           16    7355
XP_005255312                                                           16    7355
XP_006721101                                                           16    7355
XP_005255311                                                           16    7355
XP_005255310                                                           16    7355
XP_005268525                                                           16    7355
XP_005268524                                                           16    7355
XP_006714850                                                           16    7355
XP_005268523                                                           16    7355
XP_006714824                                                           16    7355
NP_443099                                                              15    9605
NP_065769                                                              15    9605
NP_065788                                                              15    9605
NP_001171895                                                           15    9605
NP_001161842                                                           15    9605
NP_055595                                                              15    9605
NP_001159445                                                           15    9605
NP_057683                                                              15    9605
NP_061918                                                              15    9605
NP_001171894                                                           15    9605
NP_001186623                                                           15    9605
NP_001186622                                                           15    9605
NP_001186621                                                           15    9605
NP_001073341                                                           15    9605
NP_150229                                                              15    9605
NP_001269736                                                           15    9605
NP_001269734                                                           15    9605
NP_001640                                                              15    9605
NP_001257309                                                           15    9605
NP_003579                                                              15    9605
NP_892014                                                              15    9605
NP_073737                                                              15    9605
NP_001257310                                                           15    9605
NP_003031                                                              15    9605
XP_006724848                                                           15    9605
XP_006724847                                                           15    9605
XP_005262538                                                           15    9605
XP_005274557                                                           15    9605
XP_005255915                                                           15    9605
XP_006720008                                                           15    9605
XP_006720007                                                           15    9605
XP_006720006                                                           15    9605
XP_006718498                                                           15    9605
XP_005273831                                                           15    9605
XP_005273830                                                           15    9605
XP_005273828                                                           15    9605
XP_006718495                                                           15    9605
XP_005273827                                                           15    9605
XP_005273826                                                           15    9605
XP_005273825                                                           15    9605
XP_005273824                                                           15    9605
XP_005273823                                                           15    9605
XP_005273822                                                           15    9605
XP_005269501                                                           15    9605
XP_006716157                                                           15    9605
XP_006715348                                                           15    9605
XP_005249560                                                           15    9605
XP_006714297                                                           15    9605
XP_005246831                                                           15    9605
XP_005246830                                                           15    9605
XP_005270973                                                           15    9605
XP_005270971                                                           15    9605
XP_005270970                                                           15    9605
>NP_005179
          Length = 906

 Score = 18.5 bits (36), Expect =  1135
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   RRTLSHISN 9
           RRTLS ISN
Sbjct: 787 RRTLSDISN 795
>NP_001180451
          Length = 1223

 Score = 17.7 bits (34), Expect =  1935
 Identities = 7/7 (100%), Positives = 7/7 (100%)

Query: 2   RTLSHIS 8
           RTLSHIS
Sbjct: 450 RTLSHIS 456
>NP_001180453
          Length = 1233

 Score = 17.7 bits (34), Expect =  1935
 Identities = 7/7 (100%), Positives = 7/7 (100%)

Query: 2   RTLSHIS 8
           RTLSHIS
Sbjct: 460 RTLSHIS 466
>NP_001180452
          Length = 1239

 Score = 17.7 bits (34), Expect =  1935
 Identities = 7/7 (100%), Positives = 7/7 (100%)

Query: 2   RTLSHIS 8
           RTLSHIS
Sbjct: 466 RTLSHIS 472
>NP_078795
          Length = 1219

 Score = 17.7 bits (34), Expect =  1935
 Identities = 7/7 (100%), Positives = 7/7 (100%)

Query: 2   RTLSHIS 8
           RTLSHIS
Sbjct: 446 RTLSHIS 452
>XP_006721333
          Length = 1238

 Score = 17.7 bits (34), Expect =  1935
 Identities = 7/7 (100%), Positives = 7/7 (100%)

Query: 2   RTLSHIS 8
           RTLSHIS
Sbjct: 466 RTLSHIS 472
>XP_006721332
          Length = 1239

 Score = 17.7 bits (34), Expect =  1935
 Identities = 7/7 (100%), Positives = 7/7 (100%)

Query: 2   RTLSHIS 8
           RTLSHIS
Sbjct: 466 RTLSHIS 472
>NP_001276090
          Length = 340

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   RRTLSHISN 9
           RRTL+HI +
Sbjct: 97  RRTLTHIKD 105
>NP_001276089
          Length = 351

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1  RRTLSHISN 9
          RRTL+HI +
Sbjct: 65 RRTLTHIKD 73
>NP_005922
          Length = 383

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   RRTLSHISN 9
           RRTL+HI +
Sbjct: 97  RRTLTHIKD 105
>XP_006726158
          Length = 351

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1  RRTLSHISN 9
          RRTL+HI +
Sbjct: 65 RRTLTHIKD 73
>XP_006726065
          Length = 351

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1  RRTLSHISN 9
          RRTL+HI +
Sbjct: 65 RRTLTHIKD 73
>NP_004360
          Length = 3177

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   RRTLSHISN 9
           +  LSHISN
Sbjct: 100 QEVLSHISN 108
>NP_848552
          Length = 1677

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   RRTLSHISN 9
           RRT +H++N
Sbjct: 191 RRTQTHLNN 199
>XP_005260332
          Length = 1256

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   RRTLSHISN 9
           RRT +H++N
Sbjct: 191 RRTQTHLNN 199
>XP_005260331
          Length = 1677

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   RRTLSHISN 9
           RRT +H++N
Sbjct: 191 RRTQTHLNN 199
>XP_005260330
          Length = 1677

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   RRTLSHISN 9
           RRT +H++N
Sbjct: 191 RRTQTHLNN 199
>XP_006723761
          Length = 1677

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   RRTLSHISN 9
           RRT +H++N
Sbjct: 191 RRTQTHLNN 199
>XP_005260329
          Length = 1677

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   RRTLSHISN 9
           RRT +H++N
Sbjct: 191 RRTQTHLNN 199
>XP_005246782
          Length = 732

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1   RRTLSHIS 8
           +RTLSH++
Sbjct: 690 KRTLSHLA 697
>XP_005246780
          Length = 958

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1   RRTLSHIS 8
           +RTLSH++
Sbjct: 916 KRTLSHLA 923
>XP_005246776
          Length = 980

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1   RRTLSHIS 8
           +RTLSH++
Sbjct: 938 KRTLSHLA 945
>XP_006712723
          Length = 980

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1   RRTLSHIS 8
           +RTLSH++
Sbjct: 938 KRTLSHLA 945
>XP_006712722
          Length = 980

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1   RRTLSHIS 8
           +RTLSH++
Sbjct: 938 KRTLSHLA 945
>XP_005246775
          Length = 980

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1   RRTLSHIS 8
           +RTLSH++
Sbjct: 938 KRTLSHLA 945
>XP_005246122
          Length = 2977

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   RRTLSHISN 9
           +  LSHISN
Sbjct: 100 QEVLSHISN 108
>XP_006712316
          Length = 3010

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   RRTLSHISN 9
           +  LSHISN
Sbjct: 100 QEVLSHISN 108
>NP_008958
          Length = 1522

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   RTLSHISN 9
           RTLS +SN
Sbjct: 309 RTLSDVSN 316
>NP_000612
          Length = 471

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   RRTLSHISN 9
           RRT+  ISN
Sbjct: 309 RRTMQSISN 317
>NP_001159419
          Length = 387

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   RRTLSHISN 9
           RRT+  ISN
Sbjct: 225 RRTMQSISN 233
>NP_001438
          Length = 4349

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1    RRTLSHI 7
            RRTL H+
Sbjct: 1010 RRTLCHV 1016
>NP_055309
          Length = 1962

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   TLSHISN 9
           +LSH+SN
Sbjct: 503 SLSHLSN 509
>NP_061862
          Length = 1060

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1   RRTLSHIS 8
           ++TLSH+S
Sbjct: 692 QQTLSHLS 699
>XP_006721103
          Length = 1597

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   TLSHISN 9
           +LSH+SN
Sbjct: 471 SLSHLSN 477
>XP_005255314
          Length = 1709

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   TLSHISN 9
           +LSH+SN
Sbjct: 250 SLSHLSN 256
>XP_006721102
          Length = 1820

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   TLSHISN 9
           +LSH+SN
Sbjct: 361 SLSHLSN 367
>XP_005255313
          Length = 1822

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   TLSHISN 9
           +LSH+SN
Sbjct: 471 SLSHLSN 477
>XP_005255312
          Length = 1871

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   TLSHISN 9
           +LSH+SN
Sbjct: 471 SLSHLSN 477
>XP_006721101
          Length = 1907

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   TLSHISN 9
           +LSH+SN
Sbjct: 471 SLSHLSN 477
>XP_005255311
          Length = 1913

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   TLSHISN 9
           +LSH+SN
Sbjct: 503 SLSHLSN 509
>XP_005255310
          Length = 1919

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   TLSHISN 9
           +LSH+SN
Sbjct: 471 SLSHLSN 477
>XP_005268525
          Length = 1005

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1   RRTLSHIS 8
           ++TLSH+S
Sbjct: 637 QQTLSHLS 644
>XP_005268524
          Length = 1006

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1   RRTLSHIS 8
           ++TLSH+S
Sbjct: 638 QQTLSHLS 645
>XP_006714850
          Length = 1049

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1   RRTLSHIS 8
           ++TLSH+S
Sbjct: 681 QQTLSHLS 688
>XP_005268523
          Length = 1061

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1   RRTLSHIS 8
           ++TLSH+S
Sbjct: 693 QQTLSHLS 700
>XP_006714824
          Length = 4349

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1    RRTLSHI 7
            RRTL H+
Sbjct: 1010 RRTLCHV 1016
>NP_443099
          Length = 1738

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   RRTLSHISN 9
           RR+L H SN
Sbjct: 764 RRSLRHGSN 772
>NP_065769
          Length = 1352

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3  TLSHISN 9
          TLSH+S+
Sbjct: 74 TLSHLSS 80
>NP_065788
          Length = 789

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1  RRTLSHI 7
          R T+SHI
Sbjct: 85 RNTISHI 91
>NP_001171895
          Length = 824

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   RRTLSHISN 9
           RRT  ++SN
Sbjct: 365 RRTKEYVSN 373
>NP_001161842
          Length = 1782

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1    RRTLSHISN 9
            RR+L H+S+
Sbjct: 1088 RRSLLHLSS 1096
>NP_055595
          Length = 1698

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1    RRTLSHISN 9
            RR+L H+S+
Sbjct: 1004 RRSLLHLSS 1012
>NP_001159445
          Length = 499

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 1   RRTLSHI 7
           R+T+SH+
Sbjct: 311 RKTISHL 317
>NP_057683
          Length = 264

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4  LSHISN 9
          LSH+SN
Sbjct: 47 LSHLSN 52
>NP_061918
          Length = 913

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   RRTLSHISN 9
           RRT  ++SN
Sbjct: 390 RRTKEYVSN 398
>NP_001171894
          Length = 905

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   RRTLSHISN 9
           RRT  ++SN
Sbjct: 390 RRTKEYVSN 398
>NP_001186623
          Length = 1227

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   RRTLSH 6
           RRTL+H
Sbjct: 363 RRTLAH 368
>NP_001186622
          Length = 1232

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   RRTLSH 6
           RRTL+H
Sbjct: 368 RRTLAH 373
>NP_001186621
          Length = 1241

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   RRTLSH 6
           RRTL+H
Sbjct: 377 RRTLAH 382
>NP_001073341
          Length = 895

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   RRTLSH 6
           R+TLSH
Sbjct: 843 RKTLSH 848
>NP_150229
          Length = 1359

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   RTLSHIS 8
           +TL+HIS
Sbjct: 210 KTLTHIS 216
>NP_001269736
          Length = 666

 Score = 15.4 bits (28), Expect =  9605
 Identities = 7/9 (77%), Positives = 7/9 (77%)

Query: 1   RRTLSHISN 9
           RRT S ISN
Sbjct: 110 RRTDSSISN 118
>NP_001269734
          Length = 704

 Score = 15.4 bits (28), Expect =  9605
 Identities = 7/9 (77%), Positives = 7/9 (77%)

Query: 1   RRTLSHISN 9
           RRT S ISN
Sbjct: 148 RRTDSSISN 156
>NP_001640
          Length = 1616

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   RRTLSHISN 9
           +RTL H S+
Sbjct: 166 QRTLDHFSS 174
>NP_001257309
          Length = 598

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   TLSHISN 9
           TLSH+S+
Sbjct: 450 TLSHLSD 456
>NP_003579
          Length = 913

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   RRTLSH 6
           R+TLSH
Sbjct: 861 RKTLSH 866
>NP_892014
          Length = 792

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   TLSHISN 9
           TLSH+S+
Sbjct: 537 TLSHLSD 543
>NP_073737
          Length = 704

 Score = 15.4 bits (28), Expect =  9605
 Identities = 7/9 (77%), Positives = 7/9 (77%)

Query: 1   RRTLSHISN 9
           RRT S ISN
Sbjct: 148 RRTDSSISN 156
>NP_001257310
          Length = 517

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   TLSHISN 9
           TLSH+S+
Sbjct: 262 TLSHLSD 268
>NP_003031
          Length = 1241

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   RRTLSH 6
           RRTL+H
Sbjct: 377 RRTLAH 382
>XP_006724848
          Length = 900

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   RRTLSH 6
           R+TLSH
Sbjct: 848 RKTLSH 853
>XP_006724847
          Length = 902

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   RRTLSH 6
           R+TLSH
Sbjct: 850 RKTLSH 855
>XP_005262538
          Length = 915

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   RRTLSH 6
           R+TLSH
Sbjct: 863 RKTLSH 868
>XP_005274557
          Length = 1615

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   RRTLSHISN 9
           +RTL H S+
Sbjct: 166 QRTLDHFSS 174
>XP_005255915
          Length = 1099

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   RTLSHISN 9
           RTL+HI +
Sbjct: 107 RTLTHIDS 114
>XP_006720008
          Length = 1645

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   RRTLSHISN 9
           RR+L H SN
Sbjct: 671 RRSLRHGSN 679
>XP_006720007
          Length = 1709

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   RRTLSHISN 9
           RR+L H SN
Sbjct: 735 RRSLRHGSN 743
>XP_006720006
          Length = 1713

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   RRTLSHISN 9
           RR+L H SN
Sbjct: 739 RRSLRHGSN 747
>XP_006718498
          Length = 388

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   TLSHISN 9
           TLSH+S+
Sbjct: 133 TLSHLSD 139
>XP_005273831
          Length = 415

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   TLSHISN 9
           TLSH+S+
Sbjct: 160 TLSHLSD 166
>XP_005273830
          Length = 559

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   TLSHISN 9
           TLSH+S+
Sbjct: 304 TLSHLSD 310
>XP_005273828
          Length = 559

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   TLSHISN 9
           TLSH+S+
Sbjct: 304 TLSHLSD 310
>XP_006718495
          Length = 606

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   TLSHISN 9
           TLSH+S+
Sbjct: 458 TLSHLSD 464
>XP_005273827
          Length = 559

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   TLSHISN 9
           TLSH+S+
Sbjct: 304 TLSHLSD 310
>XP_005273826
          Length = 688

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   TLSHISN 9
           TLSH+S+
Sbjct: 433 TLSHLSD 439
>XP_005273825
          Length = 693

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   TLSHISN 9
           TLSH+S+
Sbjct: 545 TLSHLSD 551
>XP_005273824
          Length = 713

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   TLSHISN 9
           TLSH+S+
Sbjct: 458 TLSHLSD 464
>XP_005273823
          Length = 758

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   TLSHISN 9
           TLSH+S+
Sbjct: 503 TLSHLSD 509
>XP_005273822
          Length = 800

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   TLSHISN 9
           TLSH+S+
Sbjct: 545 TLSHLSD 551
>XP_005269501
          Length = 720

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 1   RRTLSHI 7
           R+T+SH+
Sbjct: 532 RKTISHL 538
>XP_006716157
          Length = 666

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   RRTLSH 6
           RRTL+H
Sbjct: 377 RRTLAH 382
>XP_006715348
          Length = 1734

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1    RRTLSHISN 9
            RR+L H+S+
Sbjct: 1036 RRSLLHLSS 1044
>XP_005249560
          Length = 1750

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1    RRTLSHISN 9
            RR+L H+S+
Sbjct: 1056 RRSLLHLSS 1064
>XP_006714297
          Length = 195

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4  LSHISN 9
          LSH+SN
Sbjct: 47 LSHLSN 52
>XP_005246831
          Length = 691

 Score = 15.4 bits (28), Expect =  9605
 Identities = 7/9 (77%), Positives = 7/9 (77%)

Query: 1   RRTLSHISN 9
           RRT S ISN
Sbjct: 148 RRTDSSISN 156
>XP_005246830
          Length = 704

 Score = 15.4 bits (28), Expect =  9605
 Identities = 7/9 (77%), Positives = 7/9 (77%)

Query: 1   RRTLSHISN 9
           RRT S ISN
Sbjct: 148 RRTDSSISN 156
>XP_005270973
          Length = 350

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   LSHISN 9
           +SHISN
Sbjct: 312 ISHISN 317
>XP_005270971
          Length = 395

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   LSHISN 9
           +SHISN
Sbjct: 357 ISHISN 362
>XP_005270970
          Length = 420

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   LSHISN 9
           +SHISN
Sbjct: 382 ISHISN 387
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.321    0.124    0.337 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 569,122
Number of extensions: 908
Number of successful extensions: 99
Number of sequences better than 10000.0: 99
Number of HSP's gapped: 99
Number of HSP's successfully gapped: 99
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (16.0 bits)
S2: 28 (15.4 bits)

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