Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005179 19 869 NP_008958 17 4312 NP_004044 16 5631 NP_079255 16 5631 NP_001036249 16 5631 NP_001106203 16 5631 XP_005268373 16 5631 XP_005268372 16 5631 XP_005268371 16 5631 XP_006720031 16 5631 XP_005268370 16 5631 XP_006720030 16 5631 XP_005268369 16 5631 XP_006720029 16 5631 XP_005268367 16 5631 XP_005268366 16 5631 XP_005268365 16 5631 XP_005268364 16 5631 XP_006714268 16 5631 XP_005263031 16 5631 XP_006714267 16 5631 XP_006714266 16 5631 XP_006714265 16 5631 XP_006714264 16 5631 XP_006714263 16 5631 XP_006714262 16 5631 NP_003310 16 7355 NP_597676 16 7355 NP_001243779 16 7355 NP_596869 16 7355 NP_149035 16 7355 NP_001015056 16 7355 NP_001015055 16 7355 NP_000169 16 7355 XP_005260463 16 7355 XP_005246888 16 7355 XP_006712788 16 7355 XP_006712787 16 7355 XP_006712786 16 7355 XP_005264536 16 7355 XP_005264535 16 7355 NP_001254479 16 7355 NP_597681 16 7355 NP_001155048 15 9605 NP_056404 15 9605 NP_004251 15 9605 NP_001155049 15 9605 NP_004041 15 9605 NP_001186768 15 9605 NP_037496 15 9605 NP_001269464 15 9605 NP_694996 15 9605 NP_006763 15 9605 NP_653184 15 9605 NP_001034451 15 9605 NP_001265227 15 9605 NP_001186793 15 9605 NP_001191443 15 9605>NP_005179 Length = 906 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 RRTLSDIS 8 RRTLSDIS Sbjct: 787 RRTLSDIS 794>NP_008958 Length = 1522 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RTLSDIS 8 RTLSD+S Sbjct: 309 RTLSDVS 315>NP_004044 Length = 437 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RRTLSDI 7 RRTL+DI Sbjct: 144 RRTLADI 150>NP_079255 Length = 1123 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RRTLSDIS 8 +RTLSDI+ Sbjct: 141 QRTLSDIA 148>NP_001036249 Length = 1113 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RTLSDIST 9 RT+SD++T Sbjct: 496 RTISDLTT 503>NP_001106203 Length = 1125 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RRTLSDIS 8 +RTLSDI+ Sbjct: 143 QRTLSDIA 150>XP_005268373 Length = 984 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RRTLSDIS 8 +RTLSDI+ Sbjct: 141 QRTLSDIA 148>XP_005268372 Length = 1043 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RRTLSDIS 8 +RTLSDI+ Sbjct: 200 QRTLSDIA 207>XP_005268371 Length = 1067 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RRTLSDIS 8 +RTLSDI+ Sbjct: 147 QRTLSDIA 154>XP_006720031 Length = 1080 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RRTLSDIS 8 +RTLSDI+ Sbjct: 73 QRTLSDIA 80>XP_005268370 Length = 1112 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RRTLSDIS 8 +RTLSDI+ Sbjct: 105 QRTLSDIA 112>XP_006720030 Length = 1128 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RRTLSDIS 8 +RTLSDI+ Sbjct: 121 QRTLSDIA 128>XP_005268369 Length = 1132 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RRTLSDIS 8 +RTLSDI+ Sbjct: 125 QRTLSDIA 132>XP_006720029 Length = 1150 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RRTLSDIS 8 +RTLSDI+ Sbjct: 143 QRTLSDIA 150>XP_005268367 Length = 1154 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RRTLSDIS 8 +RTLSDI+ Sbjct: 147 QRTLSDIA 154>XP_005268366 Length = 1180 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RRTLSDIS 8 +RTLSDI+ Sbjct: 173 QRTLSDIA 180>XP_005268365 Length = 1182 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RRTLSDIS 8 +RTLSDI+ Sbjct: 200 QRTLSDIA 207>XP_005268364 Length = 1207 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RRTLSDIS 8 +RTLSDI+ Sbjct: 200 QRTLSDIA 207>XP_006714268 Length = 1078 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RTLSDIST 9 RT+SD++T Sbjct: 496 RTISDLTT 503>XP_005263031 Length = 1113 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RTLSDIST 9 RT+SD++T Sbjct: 496 RTISDLTT 503>XP_006714267 Length = 1117 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RTLSDIST 9 RT+SD++T Sbjct: 496 RTISDLTT 503>XP_006714266 Length = 1125 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RTLSDIST 9 RT+SD++T Sbjct: 496 RTISDLTT 503>XP_006714265 Length = 1129 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RTLSDIST 9 RT+SD++T Sbjct: 496 RTISDLTT 503>XP_006714264 Length = 1129 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RTLSDIST 9 RT+SD++T Sbjct: 496 RTISDLTT 503>XP_006714263 Length = 1129 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RTLSDIST 9 RT+SD++T Sbjct: 496 RTISDLTT 503>XP_006714262 Length = 1129 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RTLSDIST 9 RT+SD++T Sbjct: 496 RTISDLTT 503>NP_003310 Length = 26926 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RRTLSDIS 8 RR+L DIS Sbjct: 25587 RRSLGDIS 25594>NP_597676 Length = 27051 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RRTLSDIS 8 RR+L DIS Sbjct: 25712 RRSLGDIS 25719>NP_001243779 Length = 34350 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RRTLSDIS 8 RR+L DIS Sbjct: 33011 RRSLGDIS 33018Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RTLSDIST 9 + LSDIST Sbjct: 8423 KKLSDIST 8430>NP_596869 Length = 33423 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RRTLSDIS 8 RR+L DIS Sbjct: 32084 RRSLGDIS 32091Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RTLSDIST 9 + LSDIST Sbjct: 7496 KKLSDIST 7503>NP_149035 Length = 550 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RTLSDIS 8 RTL+DIS Sbjct: 156 RTLTDIS 162>NP_001015056 Length = 513 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RTLSDIS 8 RTL+DIS Sbjct: 119 RTLTDIS 125>NP_001015055 Length = 563 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RTLSDIS 8 RTL+DIS Sbjct: 169 RTLTDIS 175>NP_000169 Length = 474 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 RRTLSDIS 8 RRT DIS Sbjct: 236 RRTFEDIS 243>XP_005260463 Length = 474 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 RRTLSDIS 8 RRT DIS Sbjct: 236 RRTFEDIS 243>XP_005246888 Length = 22663 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RRTLSDIS 8 RR+L DIS Sbjct: 21324 RRSLGDIS 21331>XP_006712788 Length = 24022 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RRTLSDIS 8 RR+L DIS Sbjct: 22683 RRSLGDIS 22690>XP_006712787 Length = 33978 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RRTLSDIS 8 RR+L DIS Sbjct: 32639 RRSLGDIS 32646Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RTLSDIST 9 + LSDIST Sbjct: 8424 KKLSDIST 8431>XP_006712786 Length = 35484 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RRTLSDIS 8 RR+L DIS Sbjct: 34145 RRSLGDIS 34152Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RTLSDIST 9 + LSDIST Sbjct: 8424 KKLSDIST 8431>XP_005264536 Length = 465 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RTLSDIS 8 RTL+DIS Sbjct: 169 RTLTDIS 175>XP_005264535 Length = 490 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RTLSDIS 8 RTL+DIS Sbjct: 169 RTLTDIS 175>NP_001254479 Length = 35991 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RRTLSDIS 8 RR+L DIS Sbjct: 34652 RRSLGDIS 34659Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RTLSDIST 9 + LSDIST Sbjct: 8740 KKLSDIST 8747>NP_597681 Length = 27118 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RRTLSDIS 8 RR+L DIS Sbjct: 25779 RRSLGDIS 25786>NP_001155048 Length = 630 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RRTLSDIS 8 R+TL DIS Sbjct: 470 RKTLLDIS 477>NP_056404 Length = 718 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RRTLSDIS 8 R+TL DIS Sbjct: 558 RKTLLDIS 565>NP_004251 Length = 1208 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RRTLSDIS 8 RRT SD++ Sbjct: 646 RRTASDVA 653>NP_001155049 Length = 345 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RRTLSDIS 8 R+TL DIS Sbjct: 149 RKTLLDIS 156>NP_004041 Length = 193 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RRTLSDIS 8 RRT SD++ Sbjct: 58 RRTFSDLA 65>NP_001186768 Length = 193 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RRTLSDIS 8 RRT SD++ Sbjct: 58 RRTFSDLA 65>NP_037496 Length = 463 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RRTLSDIS 8 RRT+SD++ Sbjct: 114 RRTVSDMN 121>NP_001269464 Length = 455 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RRTLSDIS 8 RRT+SD++ Sbjct: 114 RRTVSDMN 121>NP_694996 Length = 2526 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RTLSDIST 9 RT+ D+ST Sbjct: 190 RTIRDLST 197>NP_006763 Length = 1343 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RTLSDIST 9 R L+DIST Sbjct: 716 RLLNDIST 723>NP_653184 Length = 381 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 RTLSDI 7 RTLSDI Sbjct: 163 RTLSDI 168>NP_001034451 Length = 427 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 RTLSDI 7 RTLSDI Sbjct: 163 RTLSDI 168>NP_001265227 Length = 2614 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RTLSDIST 9 RT+ D+ST Sbjct: 190 RTIRDLST 197>NP_001186793 Length = 333 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RRTLSDIS 8 RRT SD++ Sbjct: 58 RRTFSDLA 65>NP_001191443 Length = 714 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RRTLSDIST 9 RR+LSD T Sbjct: 10 RRSLSDSET 18Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.315 0.123 0.302 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 371,772 Number of extensions: 537 Number of successful extensions: 63 Number of sequences better than 10000.0: 58 Number of HSP's gapped: 63 Number of HSP's successfully gapped: 63 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |