Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000305 21 229 XP_006717990 21 229 XP_006717989 21 229 NP_954868 19 869 NP_954869 19 869 NP_001277153 19 869 NP_954870 19 869 NP_954863 19 869 NP_570141 19 869 NP_001135440 19 869 NP_003791 18 1935 NP_001273357 18 1935 NP_001273355 18 1935 XP_006715652 18 1935 NP_694969 17 2528 NP_003048 17 3301 NP_001243839 17 3301 NP_002010 17 3301 NP_001153392 17 3301 NP_001153503 17 3301 NP_001153502 17 3301 NP_004719 17 3301 XP_005267162 17 3301 XP_005267161 17 3301 XP_005267160 17 3301 XP_005267159 17 3301 NP_001035822 17 4312 NP_001035816 17 4312 NP_001035818 17 4312 NP_001035817 17 4312 NP_001035819 17 4312 NP_004407 17 4312 XP_005270205 17 4312 XP_005270372 17 4312 XP_005277709 17 4312 NP_076950 17 4312 NP_003575 16 5631 NP_009158 16 5631 XP_005261530 16 5631 XP_006724279 16 5631 XP_006724278 16 5631 XP_006724277 16 5631 XP_006724274 16 5631 XP_006724273 16 5631 XP_005261528 16 5631 XP_005261527 16 5631 XP_005264661 16 5631 NP_001157588 16 7355 NP_065089 16 7355 NP_001157586 16 7355 NP_001157587 16 7355 NP_001036189 16 7355 NP_954634 16 7355 XP_006723894 16 7355 XP_006720089 16 7355 NP_001135938 16 7355 NP_597700 16 7355 NP_689541 16 7355 NP_001276989 15 9605 NP_004627 15 9605 NP_001276991 15 9605 NP_001276990 15 9605 NP_001276992 15 9605 NP_001005914 15 9605 NP_079488 15 9605 NP_789787 15 9605 NP_006036 15 9605 NP_001008781 15 9605 XP_006718827 15 9605 XP_005253263 15 9605 XP_006718205 15 9605 XP_005268519 15 9605 XP_006714849 15 9605 XP_005268518 15 9605 NP_057547 15 9605>NP_000305 Length = 403 Score = 20.8 bits (42), Expect = 229 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RTGVMICA 9 RTGVMICA Sbjct: 130 RTGVMICA 137>XP_006717990 Length = 175 Score = 20.8 bits (42), Expect = 229 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RTGVMICA 9 RTGVMICA Sbjct: 115 RTGVMICA 122>XP_006717989 Length = 388 Score = 20.8 bits (42), Expect = 229 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RTGVMICA 9 RTGVMICA Sbjct: 115 RTGVMICA 122>NP_954868 Length = 533 Score = 18.9 bits (37), Expect = 869 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RTGVMICA 9 RTG M+CA Sbjct: 326 RTGTMVCA 333>NP_954869 Length = 513 Score = 18.9 bits (37), Expect = 869 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RTGVMICA 9 RTG M+CA Sbjct: 306 RTGTMVCA 313>NP_001277153 Length = 413 Score = 18.9 bits (37), Expect = 869 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RTGVMICA 9 RTG M+CA Sbjct: 206 RTGTMVCA 213>NP_954870 Length = 551 Score = 18.9 bits (37), Expect = 869 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RTGVMICA 9 RTG M+CA Sbjct: 344 RTGTMVCA 351>NP_954863 Length = 522 Score = 18.9 bits (37), Expect = 869 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RTGVMICA 9 RTG M+CA Sbjct: 326 RTGTMVCA 333>NP_570141 Length = 445 Score = 18.9 bits (37), Expect = 869 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RTGVMICA 9 RTG M+CA Sbjct: 249 RTGTMVCA 256>NP_001135440 Length = 411 Score = 18.9 bits (37), Expect = 869 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RTGVMICA 9 RTG M+CA Sbjct: 215 RTGTMVCA 222>NP_003791 Length = 597 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RTGVMICA 9 RTG +ICA Sbjct: 132 RTGFLICA 139>NP_001273357 Length = 514 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RTGVMICA 9 RTG +ICA Sbjct: 72 RTGFLICA 79>NP_001273355 Length = 574 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RTGVMICA 9 RTG +ICA Sbjct: 132 RTGFLICA 139>XP_006715652 Length = 574 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RTGVMICA 9 RTG +ICA Sbjct: 103 RTGFLICA 110>NP_694969 Length = 170 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RTGVMICA 9 RTG+++CA Sbjct: 4 RTGLILCA 11>NP_003048 Length = 554 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RRTGVMICA 9 R GVM+C+ Sbjct: 462 RNLGVMVCS 470>NP_001243839 Length = 715 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 RTGVMIC 8 RTGV IC Sbjct: 465 RTGVCIC 471>NP_002010 Length = 1338 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TGVMICA 9 TGV++CA Sbjct: 7 TGVLLCA 13>NP_001153392 Length = 687 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TGVMICA 9 TGV++CA Sbjct: 7 TGVLLCA 13>NP_001153503 Length = 541 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TGVMICA 9 TGV++CA Sbjct: 7 TGVLLCA 13>NP_001153502 Length = 733 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TGVMICA 9 TGV++CA Sbjct: 7 TGVLLCA 13>NP_004719 Length = 783 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 RTGVMIC 8 RTGV IC Sbjct: 533 RTGVCIC 539>XP_005267162 Length = 418 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RRTGVMICA 9 R GVM+C+ Sbjct: 270 RNLGVMVCS 278>XP_005267161 Length = 418 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RRTGVMICA 9 R GVM+C+ Sbjct: 270 RNLGVMVCS 278>XP_005267160 Length = 573 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RRTGVMICA 9 R GVM+C+ Sbjct: 462 RNLGVMVCS 470>XP_005267159 Length = 610 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RRTGVMICA 9 R GVM+C+ Sbjct: 462 RNLGVMVCS 470>NP_001035822 Length = 339 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RTGVMIC 8 RTGV +C Sbjct: 278 RTGVFLC 284>NP_001035816 Length = 420 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RTGVMIC 8 RTGV +C Sbjct: 359 RTGVFLC 365>NP_001035818 Length = 269 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RTGVMIC 8 RTGV +C Sbjct: 208 RTGVFLC 214>NP_001035817 Length = 411 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RTGVMIC 8 RTGV +C Sbjct: 350 RTGVFLC 356>NP_001035819 Length = 228 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RTGVMIC 8 RTGV +C Sbjct: 167 RTGVFLC 173>NP_004407 Length = 620 Score = 16.5 bits (31), Expect = 4312 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 TGVMICA 9 TG+++CA Sbjct: 337 TGILLCA 343>XP_005270205 Length = 672 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RTGVMIC 8 RTG+ IC Sbjct: 419 RTGICIC 425>XP_005270372 Length = 339 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RTGVMIC 8 RTGV +C Sbjct: 278 RTGVFLC 284>XP_005277709 Length = 339 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RTGVMIC 8 RTGV +C Sbjct: 278 RTGVFLC 284>NP_076950 Length = 737 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RTGVMIC 8 RTG+ IC Sbjct: 484 RTGICIC 490>NP_003575 Length = 377 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RTGVMIC 8 RTG +IC Sbjct: 205 RTGYLIC 211>NP_009158 Length = 372 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GVMICA 9 GVM+CA Sbjct: 209 GVMLCA 214>XP_005261530 Length = 784 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 RRTGVMIC 8 RRT V+ C Sbjct: 474 RRTSVLFC 481>XP_006724279 Length = 802 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 RRTGVMIC 8 RRT V+ C Sbjct: 492 RRTSVLFC 499>XP_006724278 Length = 978 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 RRTGVMIC 8 RRT V+ C Sbjct: 916 RRTSVLFC 923>XP_006724277 Length = 995 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 RRTGVMIC 8 RRT V+ C Sbjct: 916 RRTSVLFC 923>XP_006724274 Length = 1189 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 RRTGVMIC 8 RRT V+ C Sbjct: 879 RRTSVLFC 886>XP_006724273 Length = 1189 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 RRTGVMIC 8 RRT V+ C Sbjct: 879 RRTSVLFC 886>XP_005261528 Length = 1189 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 RRTGVMIC 8 RRT V+ C Sbjct: 879 RRTSVLFC 886>XP_005261527 Length = 1226 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 RRTGVMIC 8 RRT V+ C Sbjct: 916 RRTSVLFC 923>XP_005264661 Length = 273 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RTGVMIC 8 RTG +IC Sbjct: 205 RTGYLIC 211>NP_001157588 Length = 786 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 TGVMICA 9 TG+M CA Sbjct: 4 TGIMDCA 10>NP_065089 Length = 786 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 TGVMICA 9 TG+M CA Sbjct: 4 TGIMDCA 10>NP_001157586 Length = 732 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 TGVMICA 9 TG+M CA Sbjct: 4 TGIMDCA 10>NP_001157587 Length = 349 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 TGVMICA 9 TG+M CA Sbjct: 4 TGIMDCA 10>NP_001036189 Length = 538 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 TGVMIC 8 TG++IC Sbjct: 377 TGILIC 382>NP_954634 Length = 500 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RTGVMIC 8 RTG+ IC Sbjct: 220 RTGLRIC 226>XP_006723894 Length = 732 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 TGVMICA 9 TG+M CA Sbjct: 4 TGIMDCA 10>XP_006720089 Length = 458 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RTGVMIC 8 RTG+ IC Sbjct: 178 RTGLRIC 184>NP_001135938 Length = 423 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 RTGVMI 7 RTGVMI Sbjct: 106 RTGVMI 111>NP_597700 Length = 523 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 RTGVMI 7 RTGVMI Sbjct: 206 RTGVMI 211>NP_689541 Length = 457 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RTGVMIC 8 RTG+ IC Sbjct: 177 RTGLRIC 183>NP_001276989 Length = 749 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RRTGVMICA 9 R +GV +CA Sbjct: 637 RDSGVYLCA 645>NP_004627 Length = 749 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RRTGVMICA 9 R +GV +CA Sbjct: 637 RDSGVYLCA 645>NP_001276991 Length = 406 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RRTGVMICA 9 R +GV +CA Sbjct: 294 RDSGVYLCA 302>NP_001276990 Length = 754 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RRTGVMICA 9 R +GV +CA Sbjct: 642 RDSGVYLCA 650>NP_001276992 Length = 406 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RRTGVMICA 9 R +GV +CA Sbjct: 294 RDSGVYLCA 302>NP_001005914 Length = 748 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RRTGVMICA 9 R +GV +CA Sbjct: 636 RDSGVYLCA 644>NP_079488 Length = 367 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 RRTGVMIC 8 R+TG IC Sbjct: 329 RKTGHQIC 336>NP_789787 Length = 333 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 RTGVMIC 8 + GVM+C Sbjct: 276 KIGVMVC 282>NP_006036 Length = 1047 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 RTGVMICA 9 RTG + CA Sbjct: 775 RTGKLTCA 782>NP_001008781 Length = 4557 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 RTGVMICA 9 R GV++C+ Sbjct: 4277 RRGVVVCS 4284>XP_006718827 Length = 3479 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 RTGVMICA 9 R GV++C+ Sbjct: 3167 RRGVVVCS 3174>XP_005253263 Length = 1231 Score = 15.4 bits (28), Expect = 9605 Identities = 3/6 (50%), Positives = 6/6 (100%) Query: 3 TGVMIC 8 TG+++C Sbjct: 1206 TGILVC 1211>XP_006718205 Length = 486 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 RRTGVMIC 8 R TGV +C Sbjct: 13 RTTGVGVC 20>XP_005268519 Length = 322 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 RRTGVMIC 8 R+TG IC Sbjct: 284 RKTGHQIC 291>XP_006714849 Length = 322 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 RRTGVMIC 8 R+TG IC Sbjct: 284 RKTGHQIC 291>XP_005268518 Length = 322 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 RRTGVMIC 8 R+TG IC Sbjct: 284 RKTGHQIC 291>NP_057547 Length = 322 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 RRTGVMIC 8 R+TG IC Sbjct: 284 RKTGHQIC 291Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.344 0.143 0.476 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 578,958 Number of extensions: 963 Number of successful extensions: 75 Number of sequences better than 10000.0: 75 Number of HSP's gapped: 75 Number of HSP's successfully gapped: 75 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |