Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_733751 20 390 XP_006716142 20 390 XP_005250088 20 390 XP_006716141 20 390 XP_005250085 20 390 XP_006716140 20 390 XP_005250084 20 390 XP_005250083 20 390 XP_005250082 20 390 NP_001184033 17 4312 NP_005924 17 4312 NP_037407 17 4312 NP_001243112 17 4312 NP_001243111 17 4312 XP_006721247 17 4312 XP_006721246 17 4312 XP_006721245 17 4312 XP_006721244 17 4312 XP_006718903 17 4312 XP_006718902 17 4312 XP_005251808 16 5631 NP_001177408 16 5631 NP_619639 16 7355 NP_733842 16 7355 NP_002470 16 7355 NP_976221 16 7355 NP_005327 16 7355 NP_689413 16 7355 NP_055241 16 7355 XP_006712539 16 7355 XP_005247059 16 7355 XP_005247058 16 7355 XP_006712538 16 7355 XP_005247060 16 7355 XP_005247057 16 7355 NP_001258931 15 9605 NP_212132 15 9605 NP_001258929 15 9605 NP_001258930 15 9605 NP_001258928 15 9605 NP_002244 15 9605 NP_079194 15 9605 NP_001138790 15 9605 NP_001138788 15 9605 NP_061944 15 9605 NP_001157101 15 9605 NP_001138789 15 9605 NP_001138787 15 9605 XP_006723939 15 9605 XP_005260616 15 9605 XP_005260615 15 9605 XP_005255351 15 9605 XP_005271350 15 9605 XP_005271349 15 9605 NP_689764 15 9605 NP_079339 15 9605>NP_733751 Length = 4911 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RRSVSVDIP 9 RRSVSVD+P Sbjct: 2515 RRSVSVDMP 2523>XP_006716142 Length = 4927 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RRSVSVDIP 9 RRSVSVD+P Sbjct: 2532 RRSVSVDMP 2540>XP_005250088 Length = 4928 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RRSVSVDIP 9 RRSVSVD+P Sbjct: 2532 RRSVSVDMP 2540>XP_006716141 Length = 4959 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RRSVSVDIP 9 RRSVSVD+P Sbjct: 2532 RRSVSVDMP 2540>XP_005250085 Length = 4979 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RRSVSVDIP 9 RRSVSVD+P Sbjct: 2532 RRSVSVDMP 2540>XP_006716140 Length = 4982 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RRSVSVDIP 9 RRSVSVD+P Sbjct: 2532 RRSVSVDMP 2540>XP_005250084 Length = 4982 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RRSVSVDIP 9 RRSVSVD+P Sbjct: 2532 RRSVSVDMP 2540>XP_005250083 Length = 4982 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RRSVSVDIP 9 RRSVSVD+P Sbjct: 2531 RRSVSVDMP 2539>XP_005250082 Length = 4983 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RRSVSVDIP 9 RRSVSVD+P Sbjct: 2532 RRSVSVDMP 2540>NP_001184033 Length = 3972 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RRSVSVDIP 9 RR+ S+D+P Sbjct: 3810 RRATSMDLP 3818>NP_005924 Length = 3969 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RRSVSVDIP 9 RR+ S+D+P Sbjct: 3807 RRATSMDLP 3815>NP_037407 Length = 2663 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 RSVSVDI 8 RSVSVDI Sbjct: 1789 RSVSVDI 1795>NP_001243112 Length = 2663 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 RSVSVDI 8 RSVSVDI Sbjct: 1789 RSVSVDI 1795>NP_001243111 Length = 2663 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 RSVSVDI 8 RSVSVDI Sbjct: 1789 RSVSVDI 1795>XP_006721247 Length = 2564 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 RSVSVDI 8 RSVSVDI Sbjct: 1690 RSVSVDI 1696>XP_006721246 Length = 2620 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 RSVSVDI 8 RSVSVDI Sbjct: 1746 RSVSVDI 1752>XP_006721245 Length = 2629 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 RSVSVDI 8 RSVSVDI Sbjct: 1755 RSVSVDI 1761>XP_006721244 Length = 2629 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 RSVSVDI 8 RSVSVDI Sbjct: 1755 RSVSVDI 1761>XP_006718903 Length = 2673 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RRSVSVDIP 9 RR+ S+D+P Sbjct: 2511 RRATSMDLP 2519>XP_006718902 Length = 2964 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RRSVSVDIP 9 RR+ S+D+P Sbjct: 2802 RRATSMDLP 2810>XP_005251808 Length = 3075 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RRSVSVDI 8 +RSVS+D+ Sbjct: 3062 KRSVSIDL 3069>NP_001177408 Length = 380 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RRSVSVDIP 9 RRS + DIP Sbjct: 329 RRSTAPDIP 337>NP_619639 Length = 4074 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RRSVSVDI 8 RRSV VD+ Sbjct: 1418 RRSVRVDL 1425>NP_733842 Length = 3396 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RRSVSVDI 8 RRSV VD+ Sbjct: 1418 RRSVRVDL 1425>NP_002470 Length = 224 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RRSVSVD 7 R+SVSVD Sbjct: 75 RKSVSVD 81>NP_976221 Length = 1268 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RRSVSVDIP 9 R VSV+IP Sbjct: 324 RTGVSVEIP 332>NP_005327 Length = 1268 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RRSVSVDIP 9 R VSV+IP Sbjct: 324 RTGVSVEIP 332>NP_689413 Length = 404 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RSVSVDI 8 RSVSVD+ Sbjct: 19 RSVSVDL 25>NP_055241 Length = 404 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RSVSVDI 8 RSVSVD+ Sbjct: 19 RSVSVDL 25>XP_006712539 Length = 1250 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RRSVSVDIP 9 R VSV+IP Sbjct: 324 RTGVSVEIP 332>XP_005247059 Length = 1268 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RRSVSVDIP 9 R VSV+IP Sbjct: 324 RTGVSVEIP 332>XP_005247058 Length = 1268 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RRSVSVDIP 9 R VSV+IP Sbjct: 324 RTGVSVEIP 332>XP_006712538 Length = 1268 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RRSVSVDIP 9 R VSV+IP Sbjct: 324 RTGVSVEIP 332>XP_005247060 Length = 1268 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RRSVSVDIP 9 R VSV+IP Sbjct: 324 RTGVSVEIP 332>XP_005247057 Length = 1268 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RRSVSVDIP 9 R VSV+IP Sbjct: 324 RTGVSVEIP 332>NP_001258931 Length = 632 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RRSVSVD 7 RRS+S+D Sbjct: 178 RRSMSID 184>NP_212132 Length = 2109 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RRSVSVD 7 RRS+S+D Sbjct: 178 RRSMSID 184>NP_001258929 Length = 2100 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RRSVSVD 7 RRS+S+D Sbjct: 178 RRSMSID 184>NP_001258930 Length = 2098 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RRSVSVD 7 RRS+S+D Sbjct: 178 RRSMSID 184>NP_001258928 Length = 2129 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RRSVSVD 7 RRS+S+D Sbjct: 178 RRSMSID 184>NP_002244 Length = 1356 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SVSVDIP 9 SVS+D+P Sbjct: 26 SVSLDLP 32>NP_079194 Length = 356 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RSVSVDI 8 RS+SVD+ Sbjct: 122 RSISVDL 128>NP_001138790 Length = 340 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RSVSVDI 8 RS+SVD+ Sbjct: 106 RSISVDL 112>NP_001138788 Length = 356 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RSVSVDI 8 RS+SVD+ Sbjct: 122 RSISVDL 128>NP_061944 Length = 418 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RRSVSVDIP 9 RRS+ +D P Sbjct: 121 RRSLELDTP 129>NP_001157101 Length = 861 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RRSVSVDIP 9 R+ +SVD P Sbjct: 158 RKYISVDAP 166>NP_001138789 Length = 249 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RSVSVDI 8 RS+SVD+ Sbjct: 15 RSISVDL 21>NP_001138787 Length = 356 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RSVSVDI 8 RS+SVD+ Sbjct: 122 RSISVDL 128>XP_006723939 Length = 249 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RSVSVDI 8 RS+SVD+ Sbjct: 15 RSISVDL 21>XP_005260616 Length = 334 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RSVSVDI 8 RS+SVD+ Sbjct: 100 RSISVDL 106>XP_005260615 Length = 441 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RSVSVDI 8 RS+SVD+ Sbjct: 207 RSISVDL 213>XP_005255351 Length = 370 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RRSVSVDIP 9 R VSVD P Sbjct: 334 RTGVSVDTP 342>XP_005271350 Length = 1854 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RRSVSVD 7 RRS+S+D Sbjct: 178 RRSMSID 184>XP_005271349 Length = 2131 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RRSVSVD 7 RRS+S+D Sbjct: 178 RRSMSID 184>NP_689764 Length = 339 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RRSVSVD 7 RRS SVD Sbjct: 273 RRSASVD 279>NP_079339 Length = 573 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RRSVSVDIP 9 R+ +SVD P Sbjct: 158 RKYISVDAP 166Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.321 0.135 0.367 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 413,872 Number of extensions: 792 Number of successful extensions: 56 Number of sequences better than 10000.0: 56 Number of HSP's gapped: 56 Number of HSP's successfully gapped: 56 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |