Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_002199                                                              18    1935
NP_004749                                                              17    2528
NP_077729                                                              17    2528
NP_001248764                                                           17    2528
XP_006716233                                                           17    2528
NP_443085                                                              17    2528
NP_001029027                                                           17    3301
NP_113689                                                              17    3301
NP_061731                                                              17    3301
NP_001230174                                                           17    4312
NP_002719                                                              17    4312
NP_116166                                                              16    5631
NP_001273282                                                           16    5631
NP_001258794                                                           16    5631
NP_001273281                                                           16    5631
NP_001258792                                                           16    5631
NP_659458                                                              16    5631
NP_001002266                                                           16    5631
NP_064575                                                              16    5631
NP_004904                                                              16    5631
NP_001258793                                                           16    5631
NP_060673                                                              16    5631
XP_005256388                                                           16    5631
XP_005256387                                                           16    5631
XP_006721413                                                           16    5631
XP_005256386                                                           16    5631
XP_006717768                                                           16    5631
XP_006717767                                                           16    5631
XP_005271861                                                           16    5631
XP_005273528                                                           16    5631
XP_006716388                                                           16    5631
XP_006711492                                                           16    5631
XP_006710841                                                           16    5631
NP_001269795                                                           16    5631
NP_878918                                                              16    7355
NP_001008275                                                           16    7355
NP_055995                                                              16    7355
NP_001275694                                                           16    7355
NP_757345                                                              16    7355
NP_001075031                                                           16    7355
NP_036440                                                              16    7355
NP_000202                                                              16    7355
NP_001124382                                                           16    7355
NP_001120963                                                           16    7355
NP_001243334                                                           16    7355
XP_006724064                                                           16    7355
XP_005267517                                                           16    7355
XP_005267516                                                           16    7355
XP_005267515                                                           16    7355
XP_005267514                                                           16    7355
XP_005267513                                                           16    7355
XP_005267512                                                           16    7355
XP_005267511                                                           16    7355
XP_006718544                                                           16    7355
XP_006718543                                                           16    7355
XP_006718542                                                           16    7355
XP_006712992                                                           16    7355
XP_006712991                                                           16    7355
XP_006712990                                                           16    7355
XP_006712989                                                           16    7355
XP_006712988                                                           16    7355
XP_006712987                                                           16    7355
XP_005264855                                                           16    7355
NP_006312                                                              16    7355
NP_112217                                                              16    7355
NP_003956                                                              16    7355
NP_060040                                                              15    9605
NP_009041                                                              15    9605
NP_001275692                                                           15    9605
NP_000913                                                              15    9605
NP_848605                                                              15    9605
NP_002044                                                              15    9605
NP_001184226                                                           15    9605
NP_055986                                                              15    9605
NP_001026919                                                           15    9605
NP_060899                                                              15    9605
NP_872379                                                              15    9605
NP_001257869                                                           15    9605
XP_006725524                                                           15    9605
XP_006725523                                                           15    9605
XP_005276828                                                           15    9605
XP_006726279                                                           15    9605
XP_005260996                                                           15    9605
XP_005260995                                                           15    9605
XP_006723220                                                           15    9605
XP_006723219                                                           15    9605
XP_006722488                                                           15    9605
XP_006722487                                                           15    9605
XP_006722486                                                           15    9605
XP_006722485                                                           15    9605
XP_005266720                                                           15    9605
XP_006722484                                                           15    9605
XP_005266717                                                           15    9605
XP_005266715                                                           15    9605
XP_005255257                                                           15    9605
XP_005255256                                                           15    9605
XP_005255255                                                           15    9605
XP_005255254                                                           15    9605
XP_005255252                                                           15    9605
XP_005268084                                                           15    9605
XP_006718873                                                           15    9605
XP_006718872                                                           15    9605
XP_005253029                                                           15    9605
XP_006714722                                                           15    9605
XP_006714721                                                           15    9605
XP_006710636                                                           15    9605
XP_006710345                                                           15    9605
XP_006710344                                                           15    9605
XP_006710343                                                           15    9605
XP_006710342                                                           15    9605
NP_002031                                                              15    9605
NP_006305                                                              15    9605
>NP_002199
          Length = 1179

 Score = 17.7 bits (34), Expect =  1935
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   RRRVQCS 7
           RRR+QCS
Sbjct: 737 RRRLQCS 743
>NP_004749
          Length = 1857

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1    RRRVQC 6
            RRRVQC
Sbjct: 1852 RRRVQC 1857
>NP_077729
          Length = 1797

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1    RRRVQC 6
            RRRVQC
Sbjct: 1792 RRRVQC 1797
>NP_001248764
          Length = 1848

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1    RRRVQC 6
            RRRVQC
Sbjct: 1843 RRRVQC 1848
>XP_006716233
          Length = 542

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1  RRRVQCS 7
          RRRV+CS
Sbjct: 67 RRRVRCS 73
>NP_443085
          Length = 626

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1  RRRVQCS 7
          RRRV+CS
Sbjct: 67 RRRVRCS 73
>NP_001029027
          Length = 692

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1  RRRVQCSL 8
          +RR++CSL
Sbjct: 48 KRRLECSL 55
>NP_113689
          Length = 816

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   RRRVQCSL 8
           RRR +CS+
Sbjct: 96  RRRAECSI 103
>NP_061731
          Length = 936

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   RRRVQCSL 8
           RRR +CS+
Sbjct: 96  RRRAECSI 103
>NP_001230174
          Length = 211

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   RVQCSLS 9
           R+QCS+S
Sbjct: 133 RIQCSVS 139
>NP_002719
          Length = 222

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   RVQCSLS 9
           R+QCS+S
Sbjct: 144 RIQCSVS 150
>NP_116166
          Length = 1338

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1  RRRVQCS 7
          RRRV CS
Sbjct: 63 RRRVVCS 69
>NP_001273282
          Length = 345

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   RRRVQCS 7
           R R+QCS
Sbjct: 281 RARIQCS 287
>NP_001258794
          Length = 350

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2  RRVQCSL 8
          RRV CSL
Sbjct: 20 RRVYCSL 26
>NP_001273281
          Length = 386

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   RRRVQCS 7
           R R+QCS
Sbjct: 322 RARIQCS 328
>NP_001258792
          Length = 350

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2  RRVQCSL 8
          RRV CSL
Sbjct: 20 RRVYCSL 26
>NP_659458
          Length = 291

 Score = 16.2 bits (30), Expect =  5631
 Identities = 4/9 (44%), Positives = 8/9 (88%)

Query: 1   RRRVQCSLS 9
           RR++ CS++
Sbjct: 152 RRKIMCSVT 160
>NP_001002266
          Length = 291

 Score = 16.2 bits (30), Expect =  5631
 Identities = 4/9 (44%), Positives = 8/9 (88%)

Query: 1   RRRVQCSLS 9
           RR++ CS++
Sbjct: 152 RRKIMCSVT 160
>NP_064575
          Length = 406

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   RRRVQCS 7
           R R+QCS
Sbjct: 342 RARIQCS 348
>NP_004904
          Length = 631

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   RRVQCSL 8
           RR+QCS+
Sbjct: 289 RRLQCSV 295
>NP_001258793
          Length = 350

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2  RRVQCSL 8
          RRV CSL
Sbjct: 20 RRVYCSL 26
>NP_060673
          Length = 350

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2  RRVQCSL 8
          RRV CSL
Sbjct: 20 RRVYCSL 26
>XP_005256388
          Length = 466

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   RRVQCSL 8
           RR+QCS+
Sbjct: 123 RRLQCSV 129
>XP_005256387
          Length = 562

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   RRVQCSL 8
           RR+QCS+
Sbjct: 219 RRLQCSV 225
>XP_006721413
          Length = 597

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   RRVQCSL 8
           RR+QCS+
Sbjct: 289 RRLQCSV 295
>XP_005256386
          Length = 632

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   RRVQCSL 8
           RR+QCS+
Sbjct: 289 RRLQCSV 295
>XP_006717768
          Length = 573

 Score = 16.2 bits (30), Expect =  5631
 Identities = 4/9 (44%), Positives = 8/9 (88%)

Query: 1   RRRVQCSLS 9
           RR++ CS++
Sbjct: 434 RRKIMCSVT 442
>XP_006717767
          Length = 573

 Score = 16.2 bits (30), Expect =  5631
 Identities = 4/9 (44%), Positives = 8/9 (88%)

Query: 1   RRRVQCSLS 9
           RR++ CS++
Sbjct: 434 RRKIMCSVT 442
>XP_005271861
          Length = 573

 Score = 16.2 bits (30), Expect =  5631
 Identities = 4/9 (44%), Positives = 8/9 (88%)

Query: 1   RRRVQCSLS 9
           RR++ CS++
Sbjct: 434 RRKIMCSVT 442
>XP_005273528
          Length = 813

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1  RRRVQCS 7
          RRRV CS
Sbjct: 63 RRRVVCS 69
>XP_006716388
          Length = 1314

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1  RRRVQCS 7
          RRRV CS
Sbjct: 63 RRRVVCS 69
>XP_006711492
          Length = 350

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2  RRVQCSL 8
          RRV CSL
Sbjct: 20 RRVYCSL 26
>XP_006710841
          Length = 345

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   RRRVQCS 7
           R R+QCS
Sbjct: 281 RARIQCS 287
>NP_001269795
          Length = 573

 Score = 16.2 bits (30), Expect =  5631
 Identities = 4/9 (44%), Positives = 8/9 (88%)

Query: 1   RRRVQCSLS 9
           RR++ CS++
Sbjct: 434 RRKIMCSVT 442
>NP_878918
          Length = 6907

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    RRRVQCSLS 9
            RRR  C+L+
Sbjct: 5753 RRRTTCALT 5761
>NP_001008275
          Length = 477

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   RRVQCS 7
           RRV+CS
Sbjct: 309 RRVECS 314
>NP_055995
          Length = 6885

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    RRRVQCSLS 9
            RRR  C+L+
Sbjct: 5753 RRRTTCALT 5761
>NP_001275694
          Length = 541

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   RRRVQCSLS 9
           RRR  CS S
Sbjct: 496 RRRFPCSCS 504
>NP_757345
          Length = 504

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   RRVQCSLS 9
           ++VQCS S
Sbjct: 444 KKVQCSTS 451
>NP_001075031
          Length = 625

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   RRRVQCSLS 9
           RRR  CS S
Sbjct: 580 RRRFPCSCS 588
>NP_036440
          Length = 1162

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   RRRVQC 6
           RRRV+C
Sbjct: 566 RRRVRC 571
>NP_000202
          Length = 769

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   RRVQCS 7
           RRV+CS
Sbjct: 586 RRVECS 591
>NP_001124382
          Length = 356

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 1   RRRVQCSL 8
           RRRV C +
Sbjct: 154 RRRVPCGI 161
>NP_001120963
          Length = 769

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   RRVQCS 7
           RRV+CS
Sbjct: 586 RRVECS 591
>NP_001243334
          Length = 723

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   RRRVQC 6
           RRRV+C
Sbjct: 127 RRRVRC 132
>XP_006724064
          Length = 700

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   RRVQCS 7
           RRV+CS
Sbjct: 517 RRVECS 522
>XP_005267517
          Length = 6883

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    RRRVQCSLS 9
            RRR  C+L+
Sbjct: 5714 RRRTTCALT 5722
>XP_005267516
          Length = 6884

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    RRRVQCSLS 9
            RRR  C+L+
Sbjct: 5753 RRRTTCALT 5761
>XP_005267515
          Length = 6899

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    RRRVQCSLS 9
            RRR  C+L+
Sbjct: 5753 RRRTTCALT 5761
>XP_005267514
          Length = 6908

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    RRRVQCSLS 9
            RRR  C+L+
Sbjct: 5753 RRRTTCALT 5761
>XP_005267513
          Length = 6921

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    RRRVQCSLS 9
            RRR  C+L+
Sbjct: 5753 RRRTTCALT 5761
>XP_005267512
          Length = 6922

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    RRRVQCSLS 9
            RRR  C+L+
Sbjct: 5753 RRRTTCALT 5761
>XP_005267511
          Length = 6922

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    RRRVQCSLS 9
            RRR  C+L+
Sbjct: 5753 RRRTTCALT 5761
>XP_006718544
          Length = 1056

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   RRRVQC 6
           RRRV+C
Sbjct: 460 RRRVRC 465
>XP_006718543
          Length = 1067

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   RRRVQC 6
           RRRV+C
Sbjct: 471 RRRVRC 476
>XP_006718542
          Length = 1145

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   RRRVQC 6
           RRRV+C
Sbjct: 549 RRRVRC 554
>XP_006712992
          Length = 421

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   RRVQCS 7
           RRVQC+
Sbjct: 173 RRVQCN 178
>XP_006712991
          Length = 421

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   RRVQCS 7
           RRVQC+
Sbjct: 173 RRVQCN 178
>XP_006712990
          Length = 421

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   RRVQCS 7
           RRVQC+
Sbjct: 173 RRVQCN 178
>XP_006712989
          Length = 438

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   RRVQCS 7
           RRVQC+
Sbjct: 190 RRVQCN 195
>XP_006712988
          Length = 466

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   RRVQCS 7
           RRVQC+
Sbjct: 218 RRVQCN 223
>XP_006712987
          Length = 493

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   RRVQCS 7
           RRVQC+
Sbjct: 245 RRVQCN 250
>XP_005264855
          Length = 493

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   RRVQCS 7
           RRVQC+
Sbjct: 245 RRVQCN 250
>NP_006312
          Length = 493

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   RRVQCS 7
           RRVQC+
Sbjct: 245 RRVQCN 250
>NP_112217
          Length = 1594

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2    RRVQCS 7
            RRV+CS
Sbjct: 1336 RRVECS 1341
>NP_003956
          Length = 344

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 1   RRRVQCSL 8
           RRRV C +
Sbjct: 142 RRRVPCGI 149
>NP_060040
          Length = 1288

 Score = 15.4 bits (28), Expect =  9605
 Identities = 7/9 (77%), Positives = 7/9 (77%)

Query: 1    RRRVQCSLS 9
            R RVQ SLS
Sbjct: 997  RLRVQISLS 1005
>NP_009041
          Length = 2627

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   RRRVQCSLS 9
           RRR  C LS
Sbjct: 607 RRRFLCHLS 615
>NP_001275692
          Length = 208

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2   RRVQC 6
           RRVQC
Sbjct: 109 RRVQC 113
>NP_000913
          Length = 1112

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 1    RRRVQCSL 8
            RRR+ C L
Sbjct: 1054 RRRIFCQL 1061
>NP_848605
          Length = 765

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   RRVQCSLS 9
           R+V C LS
Sbjct: 306 RKVSCKLS 313
>NP_002044
          Length = 592

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   RRRVQCSLS 9
           RRR  C++S
Sbjct: 584 RRRKACTIS 592
>NP_001184226
          Length = 454

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3  RVQCSL 8
          R+QCSL
Sbjct: 58 RLQCSL 63
>NP_055986
          Length = 1125

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   RRVQCSL 8
           RR+ CSL
Sbjct: 548 RRLHCSL 554
>NP_001026919
          Length = 251

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2   RRVQC 6
           RRVQC
Sbjct: 152 RRVQC 156
>NP_060899
          Length = 2624

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 1    RRRVQCSL 8
            R+R QC L
Sbjct: 2367 RKRFQCRL 2374
>NP_872379
          Length = 208

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2   RRVQC 6
           RRVQC
Sbjct: 109 RRVQC 113
>NP_001257869
          Length = 1111

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   RRVQCSL 8
           RR+ CSL
Sbjct: 534 RRLHCSL 540
>XP_006725524
          Length = 2584

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 1    RRRVQCSL 8
            R+R QC L
Sbjct: 2367 RKRFQCRL 2374
>XP_006725523
          Length = 2623

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 1    RRRVQCSL 8
            R+R QC L
Sbjct: 2366 RKRFQCRL 2373
>XP_005276828
          Length = 2584

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 1    RRRVQCSL 8
            R+R QC L
Sbjct: 2367 RKRFQCRL 2374
>XP_006726279
          Length = 2623

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 1    RRRVQCSL 8
            R+R QC L
Sbjct: 2366 RKRFQCRL 2373
>XP_005260996
          Length = 454

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3  RVQCSL 8
          R+QCSL
Sbjct: 58 RLQCSL 63
>XP_005260995
          Length = 454

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3  RVQCSL 8
          R+QCSL
Sbjct: 58 RLQCSL 63
>XP_006723220
          Length = 140

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2   RRVQC 6
           RRVQC
Sbjct: 109 RRVQC 113
>XP_006723219
          Length = 193

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2   RRVQC 6
           RRVQC
Sbjct: 109 RRVQC 113
>XP_006722488
          Length = 1084

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   RRVQCS 7
           RRV+CS
Sbjct: 172 RRVRCS 177
>XP_006722487
          Length = 1102

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   RRVQCS 7
           RRV+CS
Sbjct: 172 RRVRCS 177
>XP_006722486
          Length = 1150

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   RRVQCS 7
           RRV+CS
Sbjct: 172 RRVRCS 177
>XP_006722485
          Length = 1168

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   RRVQCS 7
           RRV+CS
Sbjct: 172 RRVRCS 177
>XP_005266720
          Length = 1234

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   RRVQCS 7
           RRV+CS
Sbjct: 172 RRVRCS 177
>XP_006722484
          Length = 1252

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   RRVQCS 7
           RRV+CS
Sbjct: 172 RRVRCS 177
>XP_005266717
          Length = 1254

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   RRVQCS 7
           RRV+CS
Sbjct: 172 RRVRCS 177
>XP_005266715
          Length = 1272

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   RRVQCS 7
           RRV+CS
Sbjct: 172 RRVRCS 177
>XP_005255257
          Length = 774

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   RRVQCSL 8
           RR+ CSL
Sbjct: 197 RRLHCSL 203
>XP_005255256
          Length = 780

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   RRVQCSL 8
           RR+ CSL
Sbjct: 203 RRLHCSL 209
>XP_005255255
          Length = 951

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   RRVQCSL 8
           RR+ CSL
Sbjct: 374 RRLHCSL 380
>XP_005255254
          Length = 1051

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   RRVQCSL 8
           RR+ CSL
Sbjct: 474 RRLHCSL 480
>XP_005255252
          Length = 1124

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   RRVQCSL 8
           RR+ CSL
Sbjct: 547 RRLHCSL 553
>XP_005268084
          Length = 2627

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   RRRVQCSLS 9
           RRR  C LS
Sbjct: 607 RRRFLCHLS 615
>XP_006718873
          Length = 596

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   RRVQCSLS 9
           R+V C LS
Sbjct: 137 RKVSCKLS 144
>XP_006718872
          Length = 717

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   RRVQCSLS 9
           R+V C LS
Sbjct: 258 RKVSCKLS 265
>XP_005253029
          Length = 1029

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 1   RRRVQCSL 8
           RRR+ C L
Sbjct: 971 RRRIFCQL 978
>XP_006714722
          Length = 2584

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 1    RRRVQCSL 8
            R+R QC L
Sbjct: 2367 RKRFQCRL 2374
>XP_006714721
          Length = 2623

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 1    RRRVQCSL 8
            R+R QC L
Sbjct: 2366 RKRFQCRL 2373
>XP_006710636
          Length = 458

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   RRRVQCSLS 9
           RRR  C++S
Sbjct: 450 RRRKACTIS 458
>XP_006710345
          Length = 455

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 1   RRRVQC 6
           RRRV C
Sbjct: 128 RRRVSC 133
>XP_006710344
          Length = 720

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 1   RRRVQC 6
           RRRV C
Sbjct: 393 RRRVSC 398
>XP_006710343
          Length = 754

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 1   RRRVQC 6
           RRRV C
Sbjct: 427 RRRVSC 432
>XP_006710342
          Length = 761

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 1   RRRVQC 6
           RRRV C
Sbjct: 434 RRRVSC 439
>NP_002031
          Length = 454

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3  RVQCSL 8
          R+QCSL
Sbjct: 58 RLQCSL 63
>NP_006305
          Length = 713

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 1   RRRVQC 6
           RRRV C
Sbjct: 386 RRRVSC 391
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.337    0.131    0.397 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 727,891
Number of extensions: 947
Number of successful extensions: 112
Number of sequences better than 10000.0: 112
Number of HSP's gapped: 112
Number of HSP's successfully gapped: 112
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (16.5 bits)
S2: 28 (15.4 bits)

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