Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001013433 19 665 NP_060785 19 665 NP_361014 19 665 NP_001258867 18 1135 NP_001401 18 1135 NP_149043 17 2528 NP_001008781 17 3301 XP_006718827 17 3301 NP_000485 16 5631 NP_065772 16 7355 XP_006724837 16 7355 NP_005017 15 9605 NP_055608 15 9605 NP_001136026 15 9605 NP_001129507 15 9605 NP_060192 15 9605 XP_006726615 15 9605 XP_006722857 15 9605 XP_006722856 15 9605 XP_005260040 15 9605 XP_006720062 15 9605 XP_006720061 15 9605 XP_006720060 15 9605 XP_006719085 15 9605 XP_006719084 15 9605 XP_006719083 15 9605 XP_005251896 15 9605 XP_005251895 15 9605 XP_005251894 15 9605 XP_006710753 15 9605 XP_005263530 15 9605 XP_006710752 15 9605 XP_006710751 15 9605 XP_006710750 15 9605 XP_006710749 15 9605 XP_006710038 15 9605 XP_006710037 15 9605 XP_006710036 15 9605 NP_001138430 15 9605 NP_055925 15 9605>NP_001013433 Length = 589 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RRRIISVQP 9 RRRI SVQP Sbjct: 104 RRRITSVQP 112>NP_060785 Length = 627 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RRRIISVQP 9 RRRI SVQP Sbjct: 142 RRRITSVQP 150>NP_361014 Length = 707 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RRRIISVQP 9 RRRI SVQP Sbjct: 222 RRRITSVQP 230>NP_001258867 Length = 2845 Score = 18.5 bits (36), Expect = 1135 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 RRIISVQP 9 RRI+SVQP Sbjct: 2023 RRILSVQP 2030>NP_001401 Length = 2778 Score = 18.5 bits (36), Expect = 1135 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 RRIISVQP 9 RRI+SVQP Sbjct: 1956 RRILSVQP 1963>NP_149043 Length = 1018 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 RRIISVQP 9 RR+ISV+P Sbjct: 988 RRLISVEP 995>NP_001008781 Length = 4557 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RIISVQP 9 RIIS+QP Sbjct: 3686 RIISIQP 3692>XP_006718827 Length = 3479 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RIISVQP 9 RIIS+QP Sbjct: 2576 RIISIQP 2582>NP_000485 Length = 1497 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RRRIISVQP 9 RRR I+V+P Sbjct: 1489 RRRSIAVKP 1497>NP_065772 Length = 1709 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RIISVQP 9 R+ISV+P Sbjct: 1010 RVISVEP 1016>XP_006724837 Length = 1533 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RIISVQP 9 R+ISV+P Sbjct: 834 RVISVEP 840>NP_005017 Length = 1044 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RRRIISVQP 9 +RR+ VQP Sbjct: 86 QRRLCDVQP 94>NP_055608 Length = 686 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 RRRIISVQP 9 RRR+ +++P Sbjct: 284 RRRVENIEP 292>NP_001136026 Length = 630 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RIISVQP 9 RI+SV+P Sbjct: 492 RILSVEP 498>NP_001129507 Length = 659 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RIISVQP 9 RI+SV+P Sbjct: 521 RILSVEP 527>NP_060192 Length = 659 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RIISVQP 9 RI+SV+P Sbjct: 521 RILSVEP 527>XP_006726615 Length = 163 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RRRIISVQP 9 RR++ S QP Sbjct: 28 RRKVQSAQP 36>XP_006722857 Length = 398 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RIISVQP 9 RI+SV+P Sbjct: 260 RILSVEP 266>XP_006722856 Length = 445 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RIISVQP 9 RI+SV+P Sbjct: 307 RILSVEP 313>XP_005260040 Length = 630 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RIISVQP 9 RI+SV+P Sbjct: 492 RILSVEP 498>XP_006720062 Length = 163 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RRRIISVQP 9 RR++ S QP Sbjct: 28 RRKVQSAQP 36>XP_006720061 Length = 165 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RRRIISVQP 9 RR++ S QP Sbjct: 28 RRKVQSAQP 36>XP_006720060 Length = 166 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RRRIISVQP 9 RR++ S QP Sbjct: 28 RRKVQSAQP 36>XP_006719085 Length = 684 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RRIISVQ 8 RRIISV+ Sbjct: 419 RRIISVE 425>XP_006719084 Length = 732 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RRIISVQ 8 RRIISV+ Sbjct: 470 RRIISVE 476>XP_006719083 Length = 735 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RRIISVQ 8 RRIISV+ Sbjct: 470 RRIISVE 476>XP_005251896 Length = 1063 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RRRIISVQP 9 RRRI QP Sbjct: 1054 RRRITFTQP 1062>XP_005251895 Length = 1077 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RRRIISVQP 9 RRRI QP Sbjct: 1068 RRRITFTQP 1076>XP_005251894 Length = 1086 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RRRIISVQP 9 RRRI QP Sbjct: 1077 RRRITFTQP 1085>XP_006710753 Length = 1015 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RRRIISVQP 9 +RR+ VQP Sbjct: 86 QRRLCDVQP 94>XP_005263530 Length = 1043 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RRRIISVQP 9 +RR+ VQP Sbjct: 86 QRRLCDVQP 94>XP_006710752 Length = 1044 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RRRIISVQP 9 +RR+ VQP Sbjct: 86 QRRLCDVQP 94>XP_006710751 Length = 1044 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RRRIISVQP 9 +RR+ VQP Sbjct: 86 QRRLCDVQP 94>XP_006710750 Length = 1044 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RRRIISVQP 9 +RR+ VQP Sbjct: 86 QRRLCDVQP 94>XP_006710749 Length = 1044 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RRRIISVQP 9 +RR+ VQP Sbjct: 86 QRRLCDVQP 94>XP_006710038 Length = 163 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RRRIISVQP 9 RR++ S QP Sbjct: 28 RRKVQSAQP 36>XP_006710037 Length = 165 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RRRIISVQP 9 RR++ S QP Sbjct: 28 RRKVQSAQP 36>XP_006710036 Length = 166 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RRRIISVQP 9 RR++ S QP Sbjct: 28 RRKVQSAQP 36>NP_001138430 Length = 731 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RRIISVQ 8 RRIISV+ Sbjct: 469 RRIISVE 475>NP_055925 Length = 1101 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RRRIISVQP 9 RRRI QP Sbjct: 1092 RRRITFTQP 1100Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.337 0.146 0.406 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 406,658 Number of extensions: 635 Number of successful extensions: 40 Number of sequences better than 10000.0: 40 Number of HSP's gapped: 40 Number of HSP's successfully gapped: 40 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |