Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004251 20 390 NP_997229 16 5631 NP_001277155 16 5631 NP_001277156 16 5631 NP_055998 16 5631 NP_055927 16 5631 NP_001158136 16 5631 NP_004517 16 5631 XP_006722754 16 5631 XP_005259877 16 5631 XP_006721884 16 5631 XP_005257286 16 5631 XP_006714675 16 5631 XP_006714673 16 5631 XP_006714672 16 5631 XP_006714670 16 5631 XP_006714669 16 5631 XP_006714668 16 5631 XP_006714667 16 5631 XP_006714666 16 5631 XP_005248555 16 5631 XP_006714665 16 5631 XP_005270716 16 5631 XP_006710540 16 5631 XP_006710539 16 5631 XP_005270713 16 5631 XP_005270712 16 5631 XP_005270711 16 5631 XP_005270710 16 5631 XP_006710538 16 5631 XP_005270709 16 5631 NP_055790 16 5631 NP_037408 16 7355 NP_001241646 15 9605 NP_001135441 15 9605 NP_001135442 15 9605 NP_001341 15 9605 NP_077816 15 9605 NP_085144 15 9605 XP_006720682 15 9605 XP_005268318 15 9605 NP_055302 15 9605>NP_004251 Length = 1208 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RRQVQRAFM 9 RR+VQRAFM Sbjct: 753 RRRVQRAFM 761>NP_997229 Length = 526 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RRQVQRA 7 RRQVQR+ Sbjct: 387 RRQVQRS 393>NP_001277155 Length = 2417 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RRQVQRAFM 9 R Q+Q+AF+ Sbjct: 403 RNQIQQAFV 411>NP_001277156 Length = 2362 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RRQVQRAFM 9 R Q+Q+AF+ Sbjct: 415 RNQIQQAFV 423>NP_055998 Length = 2434 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RRQVQRAFM 9 R Q+Q+AF+ Sbjct: 420 RNQIQQAFV 428>NP_055927 Length = 1798 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RRQVQRAFM 9 R Q+Q+AF+ Sbjct: 551 RNQIQQAFV 559>NP_001158136 Length = 2623 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RRQVQRAFM 9 R Q+Q+AF+ Sbjct: 609 RNQIQQAFV 617>NP_004517 Length = 904 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RRQVQRA 7 RRQV+RA Sbjct: 151 RRQVERA 157>XP_006722754 Length = 1169 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RRQVQRAFM 9 R Q+Q+AF+ Sbjct: 12 RNQIQQAFV 20>XP_005259877 Length = 1394 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RRQVQRAFM 9 R Q+Q+AF+ Sbjct: 237 RNQIQQAFV 245>XP_006721884 Length = 461 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RRQVQRA 7 RRQVQR+ Sbjct: 286 RRQVQRS 292>XP_005257286 Length = 562 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RRQVQRA 7 RRQVQR+ Sbjct: 387 RRQVQRS 393>XP_006714675 Length = 2275 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RRQVQRAFM 9 R Q+Q+AF+ Sbjct: 261 RNQIQQAFV 269>XP_006714673 Length = 2362 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RRQVQRAFM 9 R Q+Q+AF+ Sbjct: 415 RNQIQQAFV 423>XP_006714672 Length = 2414 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RRQVQRAFM 9 R Q+Q+AF+ Sbjct: 400 RNQIQQAFV 408>XP_006714670 Length = 2425 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RRQVQRAFM 9 R Q+Q+AF+ Sbjct: 411 RNQIQQAFV 419>XP_006714669 Length = 2429 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RRQVQRAFM 9 R Q+Q+AF+ Sbjct: 415 RNQIQQAFV 423>XP_006714668 Length = 2429 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RRQVQRAFM 9 R Q+Q+AF+ Sbjct: 415 RNQIQQAFV 423>XP_006714667 Length = 2432 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RRQVQRAFM 9 R Q+Q+AF+ Sbjct: 418 RNQIQQAFV 426>XP_006714666 Length = 2432 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RRQVQRAFM 9 R Q+Q+AF+ Sbjct: 418 RNQIQQAFV 426>XP_005248555 Length = 2626 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RRQVQRAFM 9 R Q+Q+AF+ Sbjct: 612 RNQIQQAFV 620>XP_006714665 Length = 2651 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RRQVQRAFM 9 R Q+Q+AF+ Sbjct: 637 RNQIQQAFV 645>XP_005270716 Length = 1332 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RRQVQRAFM 9 R Q+Q+AF+ Sbjct: 558 RNQIQQAFV 566>XP_006710540 Length = 1655 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RRQVQRAFM 9 R Q+Q+AF+ Sbjct: 408 RNQIQQAFV 416>XP_006710539 Length = 1683 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RRQVQRAFM 9 R Q+Q+AF+ Sbjct: 436 RNQIQQAFV 444>XP_005270713 Length = 1711 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RRQVQRAFM 9 R Q+Q+AF+ Sbjct: 464 RNQIQQAFV 472>XP_005270712 Length = 1720 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RRQVQRAFM 9 R Q+Q+AF+ Sbjct: 473 RNQIQQAFV 481>XP_005270711 Length = 1797 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RRQVQRAFM 9 R Q+Q+AF+ Sbjct: 551 RNQIQQAFV 559>XP_005270710 Length = 1804 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RRQVQRAFM 9 R Q+Q+AF+ Sbjct: 558 RNQIQQAFV 566>XP_006710538 Length = 1804 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RRQVQRAFM 9 R Q+Q+AF+ Sbjct: 557 RNQIQQAFV 565>XP_005270709 Length = 1805 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RRQVQRAFM 9 R Q+Q+AF+ Sbjct: 558 RNQIQQAFV 566>NP_055790 Length = 1570 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RRQVQRAFM 9 R Q+Q+AF+ Sbjct: 413 RNQIQQAFV 421>NP_037408 Length = 478 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RRQVQRAF 8 +++VQRAF Sbjct: 441 KQEVQRAF 448>NP_001241646 Length = 665 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RRQVQR 6 RRQ+QR Sbjct: 110 RRQIQR 115>NP_001135441 Length = 740 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RRQVQR 6 RRQ+QR Sbjct: 185 RRQIQR 190>NP_001135442 Length = 752 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RRQVQR 6 RRQ+QR Sbjct: 197 RRQIQR 202>NP_001341 Length = 740 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RRQVQR 6 RRQ+QR Sbjct: 185 RRQIQR 190>NP_077816 Length = 1499 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 RRQVQRAF 8 RRQV R F Sbjct: 208 RRQVVRGF 215>NP_085144 Length = 343 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RRQVQRAF 8 R QVQ+AF Sbjct: 215 RVQVQKAF 222>XP_006720682 Length = 803 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 RRQVQRAF 8 RRQV R F Sbjct: 208 RRQVVRGF 215>XP_005268318 Length = 1499 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 RRQVQRAF 8 RRQV R F Sbjct: 208 RRQVVRGF 215>NP_055302 Length = 320 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 RRQVQRAF 8 RRQ RAF Sbjct: 47 RRQKNRAF 54Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.355 0.142 0.389 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 379,423 Number of extensions: 705 Number of successful extensions: 42 Number of sequences better than 10000.0: 42 Number of HSP's gapped: 42 Number of HSP's successfully gapped: 42 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 14 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (17.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |