Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000537 19 869 NP_001263689 19 869 NP_001119584 19 869 NP_001119586 19 869 NP_001263625 19 869 NP_001119590 19 869 NP_001263690 19 869 NP_001119585 19 869 NP_001263624 19 869 NP_001119588 19 869 NP_001119587 19 869 NP_001119589 19 869 NP_001263627 19 869 NP_001263628 19 869 NP_001263626 19 869 NP_001171661 17 2528 NP_004245 17 2528 NP_001171665 17 2528 NP_001171662 17 2528 NP_999875 17 3301 NP_001025035 16 7355 NP_066001 16 7355 XP_006711598 16 7355 XP_006711597 16 7355 XP_006711595 16 7355 XP_006711594 16 7355 NP_110391 16 7355 NP_640337 15 9605 NP_001121187 15 9605 NP_056516 15 9605 NP_055795 15 9605 NP_001120869 15 9605 NP_055463 15 9605 NP_055431 15 9605 NP_001275638 15 9605 NP_065118 15 9605 NP_001161707 15 9605 NP_001266280 15 9605 NP_001266278 15 9605 NP_001266279 15 9605 XP_006715402 15 9605 XP_005247976 15 9605 XP_005247975 15 9605 XP_005247974 15 9605 XP_005247973 15 9605 XP_005247972 15 9605 XP_005247971 15 9605 XP_005247964 15 9605 XP_006713889 15 9605 XP_006713888 15 9605 XP_005247300 15 9605 NP_683762 15 9605>NP_000537 Length = 393 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RRPILTIST 9 RRPILTI T Sbjct: 248 RRPILTIIT 256>NP_001263689 Length = 354 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RRPILTIST 9 RRPILTI T Sbjct: 209 RRPILTIIT 217>NP_001119584 Length = 393 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RRPILTIST 9 RRPILTI T Sbjct: 248 RRPILTIIT 256>NP_001119586 Length = 341 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RRPILTIST 9 RRPILTI T Sbjct: 248 RRPILTIIT 256>NP_001263625 Length = 302 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RRPILTIST 9 RRPILTI T Sbjct: 209 RRPILTIIT 217>NP_001119590 Length = 354 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RRPILTIST 9 RRPILTI T Sbjct: 209 RRPILTIIT 217>NP_001263690 Length = 354 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RRPILTIST 9 RRPILTI T Sbjct: 209 RRPILTIIT 217>NP_001119585 Length = 346 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RRPILTIST 9 RRPILTI T Sbjct: 248 RRPILTIIT 256>NP_001263624 Length = 307 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RRPILTIST 9 RRPILTI T Sbjct: 209 RRPILTIIT 217>NP_001119588 Length = 209 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RRPILTIST 9 RRPILTI T Sbjct: 116 RRPILTIIT 124>NP_001119587 Length = 261 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RRPILTIST 9 RRPILTI T Sbjct: 116 RRPILTIIT 124>NP_001119589 Length = 214 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RRPILTIST 9 RRPILTI T Sbjct: 116 RRPILTIIT 124>NP_001263627 Length = 182 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RRPILTIST 9 RRPILTI T Sbjct: 89 RRPILTIIT 97>NP_001263628 Length = 187 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RRPILTIST 9 RRPILTI T Sbjct: 89 RRPILTIIT 97>NP_001263626 Length = 234 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RRPILTIST 9 RRPILTI T Sbjct: 89 RRPILTIIT 97>NP_001171661 Length = 542 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 RRPILTIS 8 RRPILT S Sbjct: 149 RRPILTCS 156>NP_004245 Length = 542 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 RRPILTIS 8 RRPILT S Sbjct: 149 RRPILTCS 156>NP_001171665 Length = 419 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 RRPILTIS 8 RRPILT S Sbjct: 26 RRPILTCS 33>NP_001171662 Length = 451 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 RRPILTIS 8 RRPILT S Sbjct: 58 RRPILTCS 65>NP_999875 Length = 283 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RPILTIST 9 RP+LT++T Sbjct: 10 RPLLTVAT 17>NP_001025035 Length = 1200 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RPILTIST 9 RP+L +ST Sbjct: 590 RPLLLVST 597>NP_066001 Length = 1190 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RRPILTIST 9 R P+L +ST Sbjct: 870 RHPLLALST 878>XP_006711598 Length = 313 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RRPILTIST 9 +RP+LT S+ Sbjct: 107 QRPVLTASS 115>XP_006711597 Length = 319 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RRPILTIST 9 +RP+LT S+ Sbjct: 107 QRPVLTASS 115>XP_006711595 Length = 415 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RRPILTIST 9 +RP+LT S+ Sbjct: 107 QRPVLTASS 115>XP_006711594 Length = 442 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RRPILTIST 9 +RP+LT S+ Sbjct: 107 QRPVLTASS 115>NP_110391 Length = 508 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RRPILTIST 9 +RP+LT S+ Sbjct: 107 QRPVLTASS 115>NP_640337 Length = 1115 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RRPILTI 7 RRP LT+ Sbjct: 323 RRPCLTV 329>NP_001121187 Length = 1151 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RRPILTI 7 RRP LT+ Sbjct: 323 RRPCLTV 329>NP_056516 Length = 483 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 RPILTIST 9 +P+LT+ T Sbjct: 316 QPVLTVGT 323>NP_055795 Length = 1186 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RRPILTI 7 RRP LTI Sbjct: 336 RRPSLTI 342>NP_001120869 Length = 457 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 RPILTIST 9 +P+LT+ T Sbjct: 316 QPVLTVGT 323>NP_055463 Length = 1208 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RPILTI 7 RPILT+ Sbjct: 977 RPILTV 982>NP_055431 Length = 1177 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RPILTIST 9 R ILT+ST Sbjct: 1164 RSILTLST 1171>NP_001275638 Length = 278 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RRPILT 6 RRP+LT Sbjct: 48 RRPLLT 53>NP_065118 Length = 422 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RRPILT 6 RRP+LT Sbjct: 408 RRPLLT 413>NP_001161707 Length = 2139 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RRPILTI 7 ++PILTI Sbjct: 1536 KKPILTI 1542>NP_001266280 Length = 329 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RRPILT 6 RRP+LT Sbjct: 315 RRPLLT 320>NP_001266278 Length = 250 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RRPILT 6 RRP+LT Sbjct: 236 RRPLLT 241>NP_001266279 Length = 285 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RRPILT 6 RRP+LT Sbjct: 271 RRPLLT 276>XP_006715402 Length = 1135 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RRPILTI 7 RRP LT+ Sbjct: 323 RRPCLTV 329>XP_005247976 Length = 1002 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RPILTI 7 RPILT+ Sbjct: 771 RPILTV 776>XP_005247975 Length = 1208 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RPILTI 7 RPILT+ Sbjct: 977 RPILTV 982>XP_005247974 Length = 1208 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RPILTI 7 RPILT+ Sbjct: 977 RPILTV 982>XP_005247973 Length = 1208 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RPILTI 7 RPILT+ Sbjct: 977 RPILTV 982>XP_005247972 Length = 1208 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RPILTI 7 RPILT+ Sbjct: 977 RPILTV 982>XP_005247971 Length = 1208 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RPILTI 7 RPILT+ Sbjct: 977 RPILTV 982>XP_005247964 Length = 1162 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RRPILTI 7 RRP LTI Sbjct: 336 RRPSLTI 342>XP_006713889 Length = 1186 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RRPILTI 7 RRP LTI Sbjct: 336 RRPSLTI 342>XP_006713888 Length = 1186 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RRPILTI 7 RRP LTI Sbjct: 336 RRPSLTI 342>XP_005247300 Length = 995 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RPILTIST 9 R ILT+ST Sbjct: 982 RSILTLST 989>NP_683762 Length = 278 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RRPILTIS 8 RRP LT++ Sbjct: 108 RRPSLTVA 115Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.329 0.140 0.384 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 582,181 Number of extensions: 1115 Number of successful extensions: 52 Number of sequences better than 10000.0: 52 Number of HSP's gapped: 52 Number of HSP's successfully gapped: 52 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |