Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_115803 20 390 NP_001243297 18 1935 NP_036467 17 3301 XP_005272534 17 3301 XP_005272533 17 3301 XP_005272532 17 3301 NP_689635 17 4312 NP_001240759 17 4312 NP_818931 17 4312 NP_001240758 17 4312 NP_001128662 17 4312 NP_056057 17 4312 NP_001035207 17 4312 XP_006719241 17 4312 XP_006717021 17 4312 XP_005251769 17 4312 XP_006717020 17 4312 XP_005251768 17 4312 NP_065988 16 5631 NP_689672 16 5631 NP_059984 16 5631 XP_006724893 16 5631 XP_005274763 16 5631 XP_006724892 16 5631 XP_005274762 16 5631 XP_005267986 16 5631 XP_006716240 16 5631 NP_001268231 16 7355 NP_115756 16 7355 NP_733792 16 7355 NP_733781 16 7355 NP_203126 16 7355 NP_001245320 16 7355 XP_005276467 16 7355 XP_006720086 16 7355 XP_006720085 16 7355 XP_006720084 16 7355 XP_006718833 16 7355 XP_006714784 16 7355 NP_000159 15 9605 NP_002825 15 9605 NP_001003703 15 9605 NP_001003697 15 9605 NP_001676 15 9605 NP_001003696 15 9605 NP_001003701 15 9605 NP_001186804 15 9605 NP_542376 15 9605 NP_004361 15 9605 NP_001265253 15 9605 XP_005261049 15 9605 XP_006719590 15 9605 XP_006719589 15 9605 XP_005268685 15 9605 XP_006719245 15 9605 XP_006719244 15 9605 XP_005249761 15 9605 XP_005249760 15 9605 XP_006715397 15 9605 NP_001094090 15 9605 NP_005471 15 9605>NP_115803 Length = 1156 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RRNVGIMQP 9 RRNVG MQP Sbjct: 805 RRNVGNMQP 813>NP_001243297 Length = 102 Score = 17.7 bits (34), Expect = 1935 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RNVGIMQP 9 RN+G++QP Sbjct: 30 RNLGLLQP 37>NP_036467 Length = 1098 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RRNVGIMQP 9 R+N+G+M P Sbjct: 222 RQNLGLMTP 230>XP_005272534 Length = 1071 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RRNVGIMQP 9 R+N+G+M P Sbjct: 222 RQNLGLMTP 230>XP_005272533 Length = 1096 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RRNVGIMQP 9 R+N+G+M P Sbjct: 222 RQNLGLMTP 230>XP_005272532 Length = 1100 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RRNVGIMQP 9 R+N+G+M P Sbjct: 222 RQNLGLMTP 230>NP_689635 Length = 806 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RRNVGIMQP 9 RRNV +QP Sbjct: 427 RRNVECLQP 435>NP_001240759 Length = 749 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RRNVGIMQP 9 RRNV +QP Sbjct: 375 RRNVECLQP 383>NP_818931 Length = 754 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RRNVGIMQP 9 RRNV +QP Sbjct: 375 RRNVECLQP 383>NP_001240758 Length = 808 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RRNVGIMQP 9 RRNV +QP Sbjct: 429 RRNVECLQP 437>NP_001128662 Length = 1133 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RRNVGIMQ 8 RRNVGI + Sbjct: 903 RRNVGIRE 910>NP_056057 Length = 1205 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RRNVGIMQ 8 RRNVGI + Sbjct: 964 RRNVGIRE 971>NP_001035207 Length = 1450 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RRNVGIMQ 8 RRNVGI + Sbjct: 1209 RRNVGIRE 1216>XP_006719241 Length = 344 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RRNVGIMQP 9 +RN GI+ P Sbjct: 50 KRNAGILAP 58>XP_006717021 Length = 630 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RRNVGIMQP 9 RRNV +QP Sbjct: 251 RRNVECLQP 259>XP_005251769 Length = 703 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RRNVGIMQP 9 RRNV +QP Sbjct: 324 RRNVECLQP 332>XP_006717020 Length = 754 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RRNVGIMQP 9 RRNV +QP Sbjct: 375 RRNVECLQP 383>XP_005251768 Length = 754 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RRNVGIMQP 9 RRNV +QP Sbjct: 375 RRNVECLQP 383>NP_065988 Length = 2048 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RRNVGIMQP 9 R+NVGI P Sbjct: 1954 RKNVGIHVP 1962>NP_689672 Length = 402 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RNVGIMQP 9 RN+G +QP Sbjct: 331 RNLGSLQP 338>NP_059984 Length = 1871 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VGIMQP 9 VG+MQP Sbjct: 696 VGVMQP 701>XP_006724893 Length = 1719 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VGIMQP 9 VG+MQP Sbjct: 696 VGVMQP 701>XP_005274763 Length = 1789 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VGIMQP 9 VG+MQP Sbjct: 614 VGVMQP 619>XP_006724892 Length = 1841 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VGIMQP 9 VG+MQP Sbjct: 696 VGVMQP 701>XP_005274762 Length = 1853 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VGIMQP 9 VG+MQP Sbjct: 696 VGVMQP 701>XP_005267986 Length = 2022 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RRNVGIMQP 9 R+NVGI P Sbjct: 1928 RKNVGIHVP 1936>XP_006716240 Length = 213 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RNVGIMQP 9 RN+G +QP Sbjct: 15 RNLGSLQP 22>NP_001268231 Length = 811 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RNVGIM 7 RN+GIM Sbjct: 103 RNIGIM 108>NP_115756 Length = 779 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RNVGIM 7 RN+GIM Sbjct: 71 RNIGIM 76>NP_733792 Length = 732 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RNVGIM 7 RN+GIM Sbjct: 71 RNIGIM 76>NP_733781 Length = 513 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RNVGIM 7 RN+GIM Sbjct: 71 RNIGIM 76>NP_203126 Length = 253 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RRNVGIMQP 9 RR++G +QP Sbjct: 161 RRDLGRLQP 169>NP_001245320 Length = 229 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RRNVGIMQP 9 RRN I QP Sbjct: 12 RRNKAIAQP 20>XP_005276467 Length = 97 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 NVGIMQP 9 N+G++QP Sbjct: 91 NLGLLQP 97>XP_006720086 Length = 703 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 NVGIMQP 9 N+G++QP Sbjct: 691 NLGLLQP 697>XP_006720085 Length = 704 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 NVGIMQP 9 N+G++QP Sbjct: 692 NLGLLQP 698>XP_006720084 Length = 730 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 NVGIMQP 9 N+G++QP Sbjct: 718 NLGLLQP 724>XP_006718833 Length = 229 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RRNVGIMQP 9 RRN I QP Sbjct: 12 RRNKAIAQP 20>XP_006714784 Length = 734 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RNVGIM 7 RN+GIM Sbjct: 71 RNIGIM 76>NP_000159 Length = 1580 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RRNVGIMQP 9 RRN MQP Sbjct: 54 RRNAITMQP 62>NP_002825 Length = 593 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 NVGIMQ 8 NVG+MQ Sbjct: 582 NVGLMQ 587>NP_001003703 Length = 108 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 RRNVGI 6 RRN+G+ Sbjct: 22 RRNIGV 27>NP_001003697 Length = 108 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 RRNVGI 6 RRN+G+ Sbjct: 22 RRNIGV 27>NP_001676 Length = 108 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 RRNVGI 6 RRN+G+ Sbjct: 22 RRNIGV 27>NP_001003696 Length = 108 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 RRNVGI 6 RRN+G+ Sbjct: 22 RRNIGV 27>NP_001003701 Length = 116 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 RRNVGI 6 RRN+G+ Sbjct: 30 RRNIGV 35>NP_001186804 Length = 170 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 RRNVGIMQP 9 ++ VG+ QP Sbjct: 37 KQRVGVQQP 45>NP_542376 Length = 1899 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RRNVGIMQP 9 RRN I+QP Sbjct: 912 RRNNVILQP 920>NP_004361 Length = 3063 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RRNVGIMQP 9 RRN I+QP Sbjct: 2076 RRNNVILQP 2084>NP_001265253 Length = 126 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RRNVGIMQP 9 +R VGI QP Sbjct: 80 QRLVGISQP 88>XP_005261049 Length = 108 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 RRNVGI 6 RRN+G+ Sbjct: 22 RRNIGV 27>XP_006719590 Length = 559 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 NVGIMQ 8 NVG+MQ Sbjct: 548 NVGLMQ 553>XP_006719589 Length = 597 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 NVGIMQ 8 NVG+MQ Sbjct: 586 NVGLMQ 591>XP_005268685 Length = 463 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 RRNVGIMQP 9 R N+G M P Sbjct: 451 RENIGNMPP 459>XP_006719245 Length = 776 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RRNVGIMQP 9 +R VGI QP Sbjct: 80 QRLVGISQP 88>XP_006719244 Length = 868 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RRNVGIMQP 9 +R VGI QP Sbjct: 80 QRLVGISQP 88>XP_005249761 Length = 1580 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RRNVGIMQP 9 RRN MQP Sbjct: 54 RRNAITMQP 62>XP_005249760 Length = 1580 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RRNVGIMQP 9 RRN MQP Sbjct: 54 RRNAITMQP 62>XP_006715397 Length = 2972 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RRNVGIMQP 9 RRN I+QP Sbjct: 1985 RRNNVILQP 1993>NP_001094090 Length = 144 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RRNVGIMQP 9 +R VGI QP Sbjct: 80 QRLVGISQP 88>NP_005471 Length = 778 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RRNVGIMQP 9 +R VGI QP Sbjct: 80 QRLVGISQP 88Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.328 0.144 0.434 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 489,011 Number of extensions: 928 Number of successful extensions: 61 Number of sequences better than 10000.0: 61 Number of HSP's gapped: 61 Number of HSP's successfully gapped: 61 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |