Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001136197 18 1482 NP_002040 18 1935 NP_001124390 17 2528 XP_006721893 17 2528 XP_006721892 17 2528 XP_006721891 17 2528 XP_006721890 17 2528 NP_001271132 17 3301 NP_001092095 17 3301 NP_001271131 17 3301 NP_057559 17 3301 NP_001271130 17 3301 NP_694546 17 3301 NP_006494 17 3301 NP_659431 16 7355 NP_001167579 16 7355 NP_006256 15 9605 NP_079279 15 9605 NP_001265381 15 9605 NP_001265380 15 9605 NP_001265382 15 9605 NP_001165882 15 9605 NP_001165883 15 9605 NP_002241 15 9605 NP_009168 15 9605 NP_001129206 15 9605 NP_620409 15 9605 NP_597733 15 9605 NP_057662 15 9605 NP_001035009 15 9605 XP_005258943 15 9605 XP_005258939 15 9605 XP_006719031 15 9605 XP_006719030 15 9605 XP_006719029 15 9605 XP_006719028 15 9605 XP_006719027 15 9605 XP_006719026 15 9605 XP_005274108 15 9605 XP_005246315 15 9605 XP_006712289 15 9605 XP_005246314 15 9605 XP_005246313 15 9605 XP_005246312 15 9605 XP_005246311 15 9605 XP_005246310 15 9605 XP_006712288 15 9605 XP_006712287 15 9605 XP_005246309 15 9605 XP_006712286 15 9605 XP_006710999 15 9605 XP_006710998 15 9605 NP_695003 15 9605>NP_001136197 Length = 691 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 RRKKRLIVS 9 RR KRL+VS Sbjct: 601 RRSKRLVVS 609>NP_002040 Length = 413 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RRKKRLIVS 9 R KKRLIVS Sbjct: 243 RPKKRLIVS 251>NP_001124390 Length = 891 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 RRKKRLIVS 9 R+KKRL+++ Sbjct: 104 RKKKRLVIN 112>XP_006721893 Length = 713 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 RRKKRLIVS 9 R+KKRL+++ Sbjct: 104 RKKKRLVIN 112>XP_006721892 Length = 843 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 RRKKRLIVS 9 R+KKRL+++ Sbjct: 56 RKKKRLVIN 64>XP_006721891 Length = 891 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 RRKKRLIVS 9 R+KKRL+++ Sbjct: 104 RKKKRLVIN 112>XP_006721890 Length = 891 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 RRKKRLIVS 9 R+KKRL+++ Sbjct: 104 RKKKRLVIN 112>NP_001271132 Length = 248 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 RKKRLIV 8 RKKRLIV Sbjct: 184 RKKRLIV 190>NP_001092095 Length = 305 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 RKKRLIV 8 RKKRLIV Sbjct: 241 RKKRLIV 247>NP_001271131 Length = 319 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 RKKRLIV 8 RKKRLIV Sbjct: 255 RKKRLIV 261>NP_057559 Length = 311 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 RKKRLIV 8 RKKRLIV Sbjct: 247 RKKRLIV 253>NP_001271130 Length = 325 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 RKKRLIV 8 RKKRLIV Sbjct: 261 RKKRLIV 267>NP_694546 Length = 387 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 RRKKRLIVS 9 RR+KRLI S Sbjct: 307 RRQKRLIFS 315>NP_006494 Length = 418 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 RRKKRLIVS 9 RR+KRLI S Sbjct: 338 RRQKRLIFS 346>NP_659431 Length = 305 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RRKKRL 6 RRKKRL Sbjct: 81 RRKKRL 86>NP_001167579 Length = 979 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 RRKKRLIVS 9 RR+K+LI++ Sbjct: 74 RRRKKLILA 82>NP_006256 Length = 631 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RRKKRLIV 8 +RK++LIV Sbjct: 319 KRKRKLIV 326>NP_079279 Length = 1910 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 RKKRLI 7 RKKRLI Sbjct: 250 RKKRLI 255>NP_001265381 Length = 807 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RRKKRLIVS 9 R+KKR++ S Sbjct: 609 RKKKRILKS 617>NP_001265380 Length = 840 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RRKKRLIVS 9 R+KKR++ S Sbjct: 642 RKKKRILKS 650>NP_001265382 Length = 753 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RRKKRLIVS 9 R+KKR++ S Sbjct: 555 RKKKRILKS 563>NP_001165882 Length = 522 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RRKKRLIVS 9 +RK RL+V+ Sbjct: 354 KRKARLVVA 362>NP_001165883 Length = 524 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RRKKRLIVS 9 +RK RL+V+ Sbjct: 356 KRKARLVVA 364>NP_002241 Length = 427 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RRKKRLI 7 RR+KRL+ Sbjct: 13 RRRKRLL 19>NP_009168 Length = 867 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RRKKRLIVS 9 R+KKR++ S Sbjct: 669 RKKKRILKS 677>NP_001129206 Length = 577 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RRKKRLIVS 9 R+KKR++ S Sbjct: 194 RKKKRMLES 202>NP_620409 Length = 524 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RRKKRLIVS 9 +RK RL+V+ Sbjct: 356 KRKARLVVA 364>NP_597733 Length = 516 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RRKKRLIVS 9 R+KKR++ S Sbjct: 194 RKKKRMLES 202>NP_057662 Length = 1441 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RRKKRLI 7 RRK+RL+ Sbjct: 966 RRKERLV 972>NP_001035009 Length = 461 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RRKKRLIVS 9 R+KKR++ S Sbjct: 139 RKKKRMLES 147>XP_005258943 Length = 251 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RRKKRLI 7 RR+KRL+ Sbjct: 13 RRRKRLL 19>XP_005258939 Length = 395 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RRKKRLI 7 RR+KRL+ Sbjct: 13 RRRKRLL 19>XP_006719031 Length = 561 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RRKKRLIVS 9 R+KKR++ S Sbjct: 178 RKKKRMLES 186>XP_006719030 Length = 561 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RRKKRLIVS 9 R+KKR++ S Sbjct: 178 RKKKRMLES 186>XP_006719029 Length = 577 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RRKKRLIVS 9 R+KKR++ S Sbjct: 194 RKKKRMLES 202>XP_006719028 Length = 577 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RRKKRLIVS 9 R+KKR++ S Sbjct: 194 RKKKRMLES 202>XP_006719027 Length = 577 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RRKKRLIVS 9 R+KKR++ S Sbjct: 194 RKKKRMLES 202>XP_006719026 Length = 577 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RRKKRLIVS 9 R+KKR++ S Sbjct: 194 RKKKRMLES 202>XP_005274108 Length = 1438 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RRKKRLI 7 RRK+RL+ Sbjct: 963 RRKERLV 969>XP_005246315 Length = 675 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RRKKRLIVS 9 R+KKR++ S Sbjct: 477 RKKKRILKS 485>XP_006712289 Length = 750 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RRKKRLIVS 9 R+KKR++ S Sbjct: 669 RKKKRILKS 677>XP_005246314 Length = 789 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RRKKRLIVS 9 R+KKR++ S Sbjct: 591 RKKKRILKS 599>XP_005246313 Length = 806 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RRKKRLIVS 9 R+KKR++ S Sbjct: 608 RKKKRILKS 616>XP_005246312 Length = 817 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RRKKRLIVS 9 R+KKR++ S Sbjct: 619 RKKKRILKS 627>XP_005246311 Length = 833 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RRKKRLIVS 9 R+KKR++ S Sbjct: 635 RKKKRILKS 643>XP_005246310 Length = 841 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RRKKRLIVS 9 R+KKR++ S Sbjct: 643 RKKKRILKS 651>XP_006712288 Length = 845 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RRKKRLIVS 9 R+KKR++ S Sbjct: 647 RKKKRILKS 655>XP_006712287 Length = 847 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RRKKRLIVS 9 R+KKR++ S Sbjct: 649 RKKKRILKS 657>XP_005246309 Length = 864 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RRKKRLIVS 9 R+KKR++ S Sbjct: 666 RKKKRILKS 674>XP_006712286 Length = 867 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RRKKRLIVS 9 R+KKR++ S Sbjct: 669 RKKKRILKS 677>XP_006710999 Length = 463 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RRKKRLIVS 9 +RK RL+V+ Sbjct: 295 KRKARLVVA 303>XP_006710998 Length = 524 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RRKKRLIVS 9 +RK RL+V+ Sbjct: 356 KRKARLVVA 364>NP_695003 Length = 574 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RRKKRLIV 8 +RK+RLI+ Sbjct: 305 KRKRRLIL 312Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.336 0.144 0.351 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 547,901 Number of extensions: 828 Number of successful extensions: 53 Number of sequences better than 10000.0: 53 Number of HSP's gapped: 53 Number of HSP's successfully gapped: 53 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |