Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 19 869 XP_006718908 19 869 XP_005271621 19 869 XP_006718907 19 869 XP_006718906 19 869 XP_005271619 19 869 XP_005271618 19 869 NP_056289 17 2528 NP_036559 17 4312 NP_001070960 17 4312 NP_001070959 17 4312 NP_001231892 16 5631 NP_001104488 16 5631 NP_660093 16 5631 NP_892009 16 5631 XP_006718429 16 5631 XP_006718428 16 5631 XP_006718427 16 5631 NP_001019554 16 7355 NP_055718 16 7355 XP_006719740 16 7355 XP_006719739 16 7355 XP_006719738 16 7355 XP_005269272 16 7355 NP_940980 15 9605 NP_002323 15 9605 NP_001191890 15 9605 NP_002576 15 9605 NP_001191892 15 9605 NP_001128250 15 9605 NP_006186 15 9605 NP_037452 15 9605 NP_002577 15 9605 NP_060350 15 9605 NP_001158058 15 9605 XP_005268686 15 9605 XP_006717196 15 9605 XP_006717195 15 9605 XP_006717194 15 9605 XP_006717193 15 9605 XP_005264448 15 9605 XP_005264447 15 9605 XP_005264446 15 9605 XP_006711681 15 9605 XP_006711680 15 9605 XP_005245637 15 9605 XP_005245287 15 9605 XP_006711410 15 9605 XP_005245286 15 9605 XP_005245285 15 9605>NP_000042 Length = 3056 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RRIRITKNV 9 RR RITKNV Sbjct: 2579 RRSRITKNV 2587>XP_006718908 Length = 1708 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RRIRITKNV 9 RR RITKNV Sbjct: 1231 RRSRITKNV 1239>XP_005271621 Length = 2708 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RRIRITKNV 9 RR RITKNV Sbjct: 2231 RRSRITKNV 2239>XP_006718907 Length = 3050 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RRIRITKNV 9 RR RITKNV Sbjct: 2573 RRSRITKNV 2581>XP_006718906 Length = 3056 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RRIRITKNV 9 RR RITKNV Sbjct: 2579 RRSRITKNV 2587>XP_005271619 Length = 3056 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RRIRITKNV 9 RR RITKNV Sbjct: 2579 RRSRITKNV 2587>XP_005271618 Length = 3056 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RRIRITKNV 9 RR RITKNV Sbjct: 2579 RRSRITKNV 2587>NP_056289 Length = 626 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 RRIRITKN 8 R IRITKN Sbjct: 528 RAIRITKN 535>NP_036559 Length = 293 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 RRIRITKNV 9 RRIR TK+V Sbjct: 161 RRIRPTKDV 169>NP_001070960 Length = 293 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 RRIRITKNV 9 RRIR TK+V Sbjct: 161 RRIRPTKDV 169>NP_001070959 Length = 293 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 RRIRITKNV 9 RRIR TK+V Sbjct: 161 RRIRPTKDV 169>NP_001231892 Length = 2488 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RRIRITKNV 9 RR+R KN+ Sbjct: 745 RRLRTVKNI 753>NP_001104488 Length = 2365 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RRIRITKNV 9 RR+R KN+ Sbjct: 658 RRLRTVKNI 666>NP_660093 Length = 2429 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RRIRITKNV 9 RR+R KN+ Sbjct: 722 RRLRTVKNI 730>NP_892009 Length = 2432 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RRIRITKNV 9 RR+R KN+ Sbjct: 722 RRLRTVKNI 730>XP_006718429 Length = 2416 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RRIRITKNV 9 RR+R KN+ Sbjct: 673 RRLRTVKNI 681>XP_006718428 Length = 2455 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RRIRITKNV 9 RR+R KN+ Sbjct: 745 RRLRTVKNI 753>XP_006718427 Length = 2465 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RRIRITKNV 9 RR+R KN+ Sbjct: 722 RRLRTVKNI 730>NP_001019554 Length = 2385 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RRIRITKNV 9 RR+R KN+ Sbjct: 681 RRMRTVKNI 689>NP_055718 Length = 2363 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RRIRITKNV 9 RR+R KN+ Sbjct: 681 RRMRTVKNI 689>XP_006719740 Length = 1863 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RRIRITKNV 9 RR+R KN+ Sbjct: 181 RRMRTVKNI 189>XP_006719739 Length = 2306 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RRIRITKNV 9 RR+R KN+ Sbjct: 624 RRMRTVKNI 632>XP_006719738 Length = 2340 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RRIRITKNV 9 RR+R KN+ Sbjct: 658 RRMRTVKNI 666>XP_005269272 Length = 2356 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RRIRITKNV 9 RR+R KN+ Sbjct: 681 RRMRTVKNI 689>NP_940980 Length = 2527 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RRIRITKNV 9 RRI + KNV Sbjct: 2142 RRILLPKNV 2150>NP_002323 Length = 4544 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RRIRITKNV 9 RRI I +NV Sbjct: 2274 RRITIVENV 2282>NP_001191890 Length = 347 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RRIRITKNV 9 +RIR KN+ Sbjct: 287 KRIRYKKNI 295>NP_002576 Length = 430 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RRIRITKNV 9 +RIR KN+ Sbjct: 287 KRIRYKKNI 295>NP_001191892 Length = 420 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RRIRITKNV 9 +RIR KN+ Sbjct: 287 KRIRYKKNI 295>NP_001128250 Length = 359 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RRIRITKNV 9 +RIR KN+ Sbjct: 214 KRIRYKKNI 222>NP_006186 Length = 434 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RRIRITKNV 9 +RIR KN+ Sbjct: 289 KRIRYKKNI 297>NP_037452 Length = 792 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IRITKNV 9 +RI+KNV Sbjct: 684 VRISKNV 690>NP_002577 Length = 430 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RRIRITKNV 9 +RIR KN+ Sbjct: 298 KRIRYKKNI 306>NP_060350 Length = 574 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RITKNV 9 RITKN+ Sbjct: 183 RITKNI 188>NP_001158058 Length = 3708 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RRIRITKN 8 R IR+TK+ Sbjct: 220 RHIRVTKD 227>XP_005268686 Length = 2521 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RRIRITKNV 9 RRI + KNV Sbjct: 2142 RRILLPKNV 2150>XP_006717196 Length = 274 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RRIRITKNV 9 +RIR KN+ Sbjct: 129 KRIRYKKNI 137>XP_006717195 Length = 351 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RRIRITKNV 9 +RIR KN+ Sbjct: 289 KRIRYKKNI 297>XP_006717194 Length = 372 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RRIRITKNV 9 +RIR KN+ Sbjct: 310 KRIRYKKNI 318>XP_006717193 Length = 455 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RRIRITKNV 9 +RIR KN+ Sbjct: 310 KRIRYKKNI 318>XP_005264448 Length = 574 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RITKNV 9 RITKN+ Sbjct: 183 RITKNI 188>XP_005264447 Length = 574 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RITKNV 9 RITKN+ Sbjct: 183 RITKNI 188>XP_005264446 Length = 574 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RITKNV 9 RITKN+ Sbjct: 183 RITKNI 188>XP_006711681 Length = 3448 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RRIRITKN 8 R IR+TK+ Sbjct: 220 RHIRVTKD 227>XP_006711680 Length = 3617 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RRIRITKN 8 R IR+TK+ Sbjct: 220 RHIRVTKD 227>XP_005245637 Length = 3683 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RRIRITKN 8 R IR+TK+ Sbjct: 220 RHIRVTKD 227>XP_005245287 Length = 325 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RRIRITKNV 9 +RIR KN+ Sbjct: 182 KRIRYKKNI 190>XP_006711410 Length = 357 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RRIRITKNV 9 +RIR KN+ Sbjct: 214 KRIRYKKNI 222>XP_005245286 Length = 430 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RRIRITKNV 9 +RIR KN+ Sbjct: 287 KRIRYKKNI 295>XP_005245285 Length = 486 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RRIRITKNV 9 +RIR KN+ Sbjct: 343 KRIRYKKNI 351Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.338 0.146 0.381 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 359,006 Number of extensions: 671 Number of successful extensions: 50 Number of sequences better than 10000.0: 50 Number of HSP's gapped: 50 Number of HSP's successfully gapped: 50 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |