Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004295 18 1482 NP_588614 18 1935 NP_006026 17 2528 XP_005268287 17 2528 XP_005268286 17 2528 XP_005268285 17 2528 XP_005268284 17 2528 NP_060842 17 4312 NP_001006946 17 4312 NP_733828 17 4312 NP_851782 17 4312 NP_001157968 17 4312 XP_005262782 17 4312 XP_006714141 17 4312 XP_005262780 17 4312 XP_005262779 17 4312 XP_005247674 17 4312 XP_006713761 17 4312 XP_006713760 17 4312 XP_006713759 17 4312 XP_005271086 17 4312 NP_071436 16 5631 NP_849146 16 5631 NP_055638 16 7355 NP_998820 16 7355 NP_001171914 16 7355 NP_061852 16 7355 NP_073744 16 7355 NP_001030611 16 7355 NP_112593 16 7355 NP_065804 16 7355 NP_065815 16 7355 NP_001136115 16 7355 NP_001003941 16 7355 XP_005258418 16 7355 XP_006722617 16 7355 XP_005258415 16 7355 XP_005258414 16 7355 XP_005255515 16 7355 XP_006719067 16 7355 XP_006719066 16 7355 XP_005253800 16 7355 XP_005253798 16 7355 XP_005253797 16 7355 XP_005253796 16 7355 XP_006719065 16 7355 XP_006719064 16 7355 XP_006719063 16 7355 XP_006719062 16 7355 XP_005253795 16 7355 XP_005253794 16 7355 XP_005253793 16 7355 XP_005253792 16 7355 XP_006719061 16 7355 XP_005253791 16 7355 XP_005252192 16 7355 NP_060606 15 9605 NP_067629 15 9605 NP_065761 15 9605 NP_569074 15 9605 NP_001003827 15 9605 NP_001171940 15 9605 NP_689512 15 9605 NP_001003819 15 9605 NP_055366 15 9605 NP_056052 15 9605 NP_006715 15 9605 NP_005913 15 9605 XP_005261969 15 9605 XP_005267046 15 9605 XP_005267045 15 9605>NP_004295 Length = 1620 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RRAKQLVRE 9 RRAKQLV E Sbjct: 136 RRAKQLVLE 144>NP_588614 Length = 789 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 RRAKQLVRE 9 R+AK+L+RE Sbjct: 561 RKAKKLIRE 569>NP_006026 Length = 1711 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 RAKQLVRE 9 RAKQLV+E Sbjct: 888 RAKQLVQE 895>XP_005268287 Length = 1490 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 RAKQLVRE 9 RAKQLV+E Sbjct: 888 RAKQLVQE 895>XP_005268286 Length = 1685 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 RAKQLVRE 9 RAKQLV+E Sbjct: 888 RAKQLVQE 895>XP_005268285 Length = 1702 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 RAKQLVRE 9 RAKQLV+E Sbjct: 888 RAKQLVQE 895>XP_005268284 Length = 1728 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 RAKQLVRE 9 RAKQLV+E Sbjct: 888 RAKQLVQE 895>NP_060842 Length = 769 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RRAKQLVRE 9 RR KQ++RE Sbjct: 746 RRLKQVLRE 754>NP_001006946 Length = 233 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RRAKQLVRE 9 RR KQ++RE Sbjct: 210 RRLKQVLRE 218>NP_733828 Length = 1322 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RRAKQLVRE 9 RRA QL++E Sbjct: 866 RRADQLIQE 874>NP_851782 Length = 1283 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RRAKQLVRE 9 RRA QL++E Sbjct: 842 RRADQLIQE 850>NP_001157968 Length = 1854 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RAKQLVRE 9 R KQL+RE Sbjct: 1676 RRKQLIRE 1683>XP_005262782 Length = 1216 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RRAKQLVRE 9 RRA QL++E Sbjct: 768 RRADQLIQE 776>XP_006714141 Length = 1259 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RRAKQLVRE 9 RRA QL++E Sbjct: 811 RRADQLIQE 819>XP_005262780 Length = 1307 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RRAKQLVRE 9 RRA QL++E Sbjct: 866 RRADQLIQE 874>XP_005262779 Length = 1314 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RRAKQLVRE 9 RRA QL++E Sbjct: 866 RRADQLIQE 874>XP_005247674 Length = 1089 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RAKQLVRE 9 R KQL+RE Sbjct: 911 RRKQLIRE 918>XP_006713761 Length = 1554 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RAKQLVRE 9 R KQL+RE Sbjct: 1376 RRKQLIRE 1383>XP_006713760 Length = 1847 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RAKQLVRE 9 R KQL+RE Sbjct: 1669 RRKQLIRE 1676>XP_006713759 Length = 1898 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RAKQLVRE 9 R KQL+RE Sbjct: 1720 RRKQLIRE 1727>XP_005271086 Length = 768 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RRAKQLVRE 9 RR KQ++RE Sbjct: 745 RRLKQVLRE 753>NP_071436 Length = 311 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RRAKQLVR 8 RRA++LVR Sbjct: 225 RRAQELVR 232>NP_849146 Length = 697 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RRAKQLVRE 9 R+AKQL +E Sbjct: 679 RKAKQLCQE 687>NP_055638 Length = 2134 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RRAKQLVRE 9 R +QLVRE Sbjct: 569 REQRQLVRE 577>NP_998820 Length = 2634 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RRAKQLVRE 9 R +QLVRE Sbjct: 569 REQRQLVRE 577>NP_001171914 Length = 2642 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RRAKQLVRE 9 R +QLVRE Sbjct: 569 REQRQLVRE 577>NP_061852 Length = 2382 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RRAKQLVRE 9 R +QLVRE Sbjct: 569 REQRQLVRE 577>NP_073744 Length = 746 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RRAKQLV 7 RRAKQ+V Sbjct: 617 RRAKQVV 623>NP_001030611 Length = 733 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RRAKQLV 7 RRAKQ+V Sbjct: 604 RRAKQVV 610>NP_112593 Length = 466 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AKQLVRE 9 AKQLV+E Sbjct: 190 AKQLVKE 196>NP_065804 Length = 1202 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RRAKQLVRE 9 R KQL+RE Sbjct: 271 REIKQLLRE 279>NP_065815 Length = 1431 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RRAKQLVRE 9 R KQL+RE Sbjct: 271 REIKQLLRE 279>NP_001136115 Length = 1120 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RRAKQLVRE 9 R KQL+RE Sbjct: 189 REIKQLLRE 197>NP_001003941 Length = 427 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RRAKQLVR 8 RRA+Q+V+ Sbjct: 408 RRARQIVK 415>XP_005258418 Length = 427 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AKQLVRE 9 AKQLV+E Sbjct: 151 AKQLVKE 157>XP_006722617 Length = 538 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AKQLVRE 9 AKQLV+E Sbjct: 262 AKQLVKE 268>XP_005258415 Length = 563 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AKQLVRE 9 AKQLV+E Sbjct: 287 AKQLVKE 293>XP_005258414 Length = 564 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AKQLVRE 9 AKQLV+E Sbjct: 288 AKQLVKE 294>XP_005255515 Length = 1360 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RRAKQLVRE 9 R KQL+RE Sbjct: 271 REIKQLLRE 279>XP_006719067 Length = 2228 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RRAKQLVRE 9 R +QLVRE Sbjct: 569 REQRQLVRE 577>XP_006719066 Length = 2381 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RRAKQLVRE 9 R +QLVRE Sbjct: 569 REQRQLVRE 577>XP_005253800 Length = 2013 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RRAKQLVRE 9 R +QLVRE Sbjct: 162 REQRQLVRE 170>XP_005253798 Length = 2145 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RRAKQLVRE 9 R +QLVRE Sbjct: 569 REQRQLVRE 577>XP_005253797 Length = 2146 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RRAKQLVRE 9 R +QLVRE Sbjct: 569 REQRQLVRE 577>XP_005253796 Length = 2173 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RRAKQLVRE 9 R +QLVRE Sbjct: 569 REQRQLVRE 577>XP_006719065 Length = 2174 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RRAKQLVRE 9 R +QLVRE Sbjct: 569 REQRQLVRE 577>XP_006719064 Length = 2229 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RRAKQLVRE 9 R +QLVRE Sbjct: 569 REQRQLVRE 577>XP_006719063 Length = 2266 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RRAKQLVRE 9 R +QLVRE Sbjct: 569 REQRQLVRE 577>XP_006719062 Length = 2267 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RRAKQLVRE 9 R +QLVRE Sbjct: 569 REQRQLVRE 577>XP_005253795 Length = 2280 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RRAKQLVRE 9 R +QLVRE Sbjct: 569 REQRQLVRE 577>XP_005253794 Length = 2391 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RRAKQLVRE 9 R +QLVRE Sbjct: 569 REQRQLVRE 577>XP_005253793 Length = 2392 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RRAKQLVRE 9 R +QLVRE Sbjct: 569 REQRQLVRE 577>XP_005253792 Length = 2419 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RRAKQLVRE 9 R +QLVRE Sbjct: 569 REQRQLVRE 577>XP_006719061 Length = 2419 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RRAKQLVRE 9 R +QLVRE Sbjct: 569 REQRQLVRE 577>XP_005253791 Length = 2420 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RRAKQLVRE 9 R +QLVRE Sbjct: 569 REQRQLVRE 577>XP_005252192 Length = 735 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RRAKQLV 7 RRAKQ+V Sbjct: 606 RRAKQVV 612>NP_060606 Length = 3477 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RAKQLVRE 9 +A+QL+RE Sbjct: 2545 KARQLLRE 2552>NP_067629 Length = 488 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KQLVRE 9 KQLVRE Sbjct: 227 KQLVRE 232>NP_065761 Length = 583 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RAKQLVRE 9 +AK+LVR+ Sbjct: 408 KAKELVRQ 415>NP_569074 Length = 270 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KQLVRE 9 KQLVRE Sbjct: 227 KQLVRE 232>NP_001003827 Length = 488 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KQLVRE 9 KQLVRE Sbjct: 227 KQLVRE 232>NP_001171940 Length = 606 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RRAKQL 6 RRAKQL Sbjct: 89 RRAKQL 94>NP_689512 Length = 605 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RRAKQL 6 RRAKQL Sbjct: 89 RRAKQL 94>NP_001003819 Length = 842 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KQLVRE 9 KQLVRE Sbjct: 581 KQLVRE 586>NP_055366 Length = 299 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RRAKQL 6 RRAKQL Sbjct: 89 RRAKQL 94>NP_056052 Length = 1354 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RAKQLVRE 9 R++QL+RE Sbjct: 1107 RSRQLLRE 1114>NP_006715 Length = 1558 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KQLVRE 9 KQLVRE Sbjct: 649 KQLVRE 654>NP_005913 Length = 1608 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KQLVRE 9 KQLVRE Sbjct: 649 KQLVRE 654>XP_005261969 Length = 579 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RRAKQL 6 RRAKQL Sbjct: 62 RRAKQL 67>XP_005267046 Length = 1554 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KQLVRE 9 KQLVRE Sbjct: 649 KQLVRE 654>XP_005267045 Length = 1604 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KQLVRE 9 KQLVRE Sbjct: 649 KQLVRE 654Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.328 0.134 0.328 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 337,506 Number of extensions: 632 Number of successful extensions: 71 Number of sequences better than 10000.0: 71 Number of HSP's gapped: 71 Number of HSP's successfully gapped: 71 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |