Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001156685 19 869 NP_000133 19 869 XP_006713936 19 869 XP_006713934 19 869 XP_006713935 17 2528 XP_006713933 17 2528 NP_060959 17 4312 XP_005245394 17 4312 XP_005245393 17 4312 XP_006711515 17 4312 XP_006711514 17 4312 XP_006711513 17 4312 NP_004230 16 5631 NP_055692 16 5631 XP_006722279 16 5631 XP_006722278 16 5631 XP_005257947 16 5631 XP_005257946 16 5631 XP_005257945 16 5631 XP_006722277 16 5631 XP_005268271 16 5631 XP_005268270 16 5631 XP_006720384 16 5631 NP_002327 16 7355 NP_653303 16 7355 NP_005286 16 7355 XP_006719141 16 7355 XP_006711251 16 7355 XP_005244985 16 7355 XP_005244984 16 7355 XP_006711250 16 7355 XP_006711249 16 7355 XP_006711248 16 7355 XP_005244983 16 7355 NP_075254 15 9605 NP_001107604 15 9605 NP_076427 15 9605 NP_001077393 15 9605 XP_006712765 15 9605 XP_006712764 15 9605 XP_005246844 15 9605 XP_006712763 15 9605 XP_006712762 15 9605 XP_006712761 15 9605 XP_005273316 15 9605 XP_006711593 15 9605 XP_005275790 15 9605>NP_001156685 Length = 808 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 RQVSLESN 8 RQVSLESN Sbjct: 423 RQVSLESN 430>NP_000133 Length = 806 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 RQVSLESN 8 RQVSLESN Sbjct: 421 RQVSLESN 428>XP_006713936 Length = 807 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 RQVSLESN 8 RQVSLESN Sbjct: 421 RQVSLESN 428>XP_006713934 Length = 809 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 RQVSLESN 8 RQVSLESN Sbjct: 423 RQVSLESN 430>XP_006713935 Length = 807 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 RQVSLESN 8 +QVSLESN Sbjct: 422 QQVSLESN 429>XP_006713933 Length = 810 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 RQVSLESN 8 +QVSLESN Sbjct: 424 QQVSLESN 431>NP_060959 Length = 2964 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RQVSLESNT 9 R+V LE NT Sbjct: 35 REVELEKNT 43>XP_005245394 Length = 1741 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RQVSLESNT 9 R+V LE NT Sbjct: 35 REVELEKNT 43>XP_005245393 Length = 2663 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RQVSLESNT 9 R+V LE NT Sbjct: 35 REVELEKNT 43>XP_006711515 Length = 2904 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RQVSLESNT 9 R+V LE NT Sbjct: 35 REVELEKNT 43>XP_006711514 Length = 2964 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RQVSLESNT 9 R+V LE NT Sbjct: 35 REVELEKNT 43>XP_006711513 Length = 2964 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RQVSLESNT 9 R+V LE NT Sbjct: 35 REVELEKNT 43>NP_004230 Length = 1979 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QVSLESNT 9 Q+SLE NT Sbjct: 702 QLSLEKNT 709>NP_055692 Length = 1942 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RQVSLESN 8 +QV LESN Sbjct: 1305 KQVDLESN 1312>XP_006722279 Length = 1578 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RQVSLESN 8 +QV LESN Sbjct: 941 KQVDLESN 948>XP_006722278 Length = 1735 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RQVSLESN 8 +QV LESN Sbjct: 1098 KQVDLESN 1105>XP_005257947 Length = 1935 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RQVSLESN 8 +QV LESN Sbjct: 1298 KQVDLESN 1305>XP_005257946 Length = 1943 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RQVSLESN 8 +QV LESN Sbjct: 1306 KQVDLESN 1313>XP_005257945 Length = 1969 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RQVSLESN 8 +QV LESN Sbjct: 1332 KQVDLESN 1339>XP_006722277 Length = 1970 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RQVSLESN 8 +QV LESN Sbjct: 1333 KQVDLESN 1340>XP_005268271 Length = 1537 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QVSLESNT 9 Q+SLE NT Sbjct: 260 QLSLEKNT 267>XP_005268270 Length = 1950 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QVSLESNT 9 Q+SLE NT Sbjct: 673 QLSLEKNT 680>XP_006720384 Length = 1978 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QVSLESNT 9 Q+SLE NT Sbjct: 701 QLSLEKNT 708>NP_002327 Length = 1613 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RQVSLESN 8 R++SLE+N Sbjct: 643 RRISLETN 650>NP_653303 Length = 559 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RQVSLESN 8 R+VSLE N Sbjct: 198 RKVSLEGN 205>NP_005286 Length = 433 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VSLESNT 9 +SLESNT Sbjct: 105 LSLESNT 111>XP_006719141 Length = 1613 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RQVSLESN 8 R++SLE+N Sbjct: 643 RRISLETN 650>XP_006711251 Length = 466 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RQVSLESN 8 R+VSLE N Sbjct: 104 RKVSLEGN 111>XP_005244985 Length = 481 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RQVSLESN 8 R+VSLE N Sbjct: 198 RKVSLEGN 205>XP_005244984 Length = 496 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RQVSLESN 8 R+VSLE N Sbjct: 198 RKVSLEGN 205>XP_006711250 Length = 525 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RQVSLESN 8 R+VSLE N Sbjct: 198 RKVSLEGN 205>XP_006711249 Length = 526 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RQVSLESN 8 R+VSLE N Sbjct: 198 RKVSLEGN 205>XP_006711248 Length = 533 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RQVSLESN 8 R+VSLE N Sbjct: 171 RKVSLEGN 178>XP_005244983 Length = 560 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RQVSLESN 8 R+VSLE N Sbjct: 198 RKVSLEGN 205>NP_075254 Length = 694 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QVSLESN 8 +VSLESN Sbjct: 310 KVSLESN 316>NP_001107604 Length = 2694 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 QVSLESN 8 QVSLE N Sbjct: 986 QVSLEKN 992>NP_076427 Length = 601 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RQVSLESNT 9 RQ++ +SNT Sbjct: 475 RQMNFKSNT 483>NP_001077393 Length = 355 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RQVSLESNT 9 RQ++ +SNT Sbjct: 229 RQMNFKSNT 237>XP_006712765 Length = 2679 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 QVSLESN 8 QVSLE N Sbjct: 958 QVSLEKN 964>XP_006712764 Length = 2697 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 QVSLESN 8 QVSLE N Sbjct: 1015 QVSLEKN 1021>XP_005246844 Length = 2707 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 QVSLESN 8 QVSLE N Sbjct: 986 QVSLEKN 992>XP_006712763 Length = 2716 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 QVSLESN 8 QVSLE N Sbjct: 1015 QVSLEKN 1021>XP_006712762 Length = 2723 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 QVSLESN 8 QVSLE N Sbjct: 1015 QVSLEKN 1021>XP_006712761 Length = 2736 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 QVSLESN 8 QVSLE N Sbjct: 1015 QVSLEKN 1021>XP_005273316 Length = 355 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RQVSLESNT 9 RQ++ +SNT Sbjct: 229 RQMNFKSNT 237>XP_006711593 Length = 601 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RQVSLESNT 9 RQ++ +SNT Sbjct: 475 RQMNFKSNT 483>XP_005275790 Length = 207 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 QVSLESNT 9 QVSL NT Sbjct: 104 QVSLSENT 111Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.294 0.107 0.242 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 319,378 Number of extensions: 451 Number of successful extensions: 47 Number of sequences better than 10000.0: 47 Number of HSP's gapped: 47 Number of HSP's successfully gapped: 47 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |