Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001013433 19 665 NP_060785 19 665 NP_361014 19 665 NP_071750 19 665 XP_005256148 19 665 XP_006721307 19 665 XP_005256144 19 665 XP_005256143 19 665 XP_005256142 19 665 NP_001036236 16 5631 NP_005347 16 5631 XP_005270921 16 5631 XP_005270920 16 5631 XP_005270919 16 5631 NP_056994 16 7355 XP_005264407 16 7355 XP_005264406 16 7355 XP_005264405 16 7355 NP_055880 15 9605 NP_001271165 15 9605 NP_065871 15 9605 NP_001098721 15 9605 NP_078891 15 9605 NP_055548 15 9605 NP_001171526 15 9605 NP_001271166 15 9605 NP_001171527 15 9605 NP_619648 15 9605 XP_005271520 15 9605 XP_005271519 15 9605 XP_005271518 15 9605 XP_005248691 15 9605 XP_005248689 15 9605 XP_005248654 15 9605 XP_005248653 15 9605>NP_001013433 Length = 589 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 QSLTSGME 9 QSLTSGME Sbjct: 463 QSLTSGME 470>NP_060785 Length = 627 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 QSLTSGME 9 QSLTSGME Sbjct: 501 QSLTSGME 508>NP_361014 Length = 707 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 QSLTSGME 9 QSLTSGME Sbjct: 581 QSLTSGME 588>NP_071750 Length = 486 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RQSLTSGME 9 RQSLTSG E Sbjct: 436 RQSLTSGQE 444>XP_005256148 Length = 278 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RQSLTSGME 9 RQSLTSG E Sbjct: 228 RQSLTSGQE 236>XP_006721307 Length = 370 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RQSLTSGME 9 RQSLTSG E Sbjct: 320 RQSLTSGQE 328>XP_005256144 Length = 486 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RQSLTSGME 9 RQSLTSG E Sbjct: 436 RQSLTSGQE 444>XP_005256143 Length = 486 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RQSLTSGME 9 RQSLTSG E Sbjct: 436 RQSLTSGQE 444>XP_005256142 Length = 486 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RQSLTSGME 9 RQSLTSG E Sbjct: 436 RQSLTSGQE 444>NP_001036236 Length = 509 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QSLTSGME 9 QSLT+G E Sbjct: 101 QSLTTGQE 108>NP_005347 Length = 509 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QSLTSGME 9 QSLT+G E Sbjct: 101 QSLTTGQE 108>XP_005270921 Length = 553 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QSLTSGME 9 QSLT+G E Sbjct: 145 QSLTTGQE 152>XP_005270920 Length = 567 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QSLTSGME 9 QSLT+G E Sbjct: 159 QSLTTGQE 166>XP_005270919 Length = 567 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QSLTSGME 9 QSLT+G E Sbjct: 159 QSLTTGQE 166>NP_056994 Length = 746 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QSLTSGME 9 +S+TSG+E Sbjct: 632 ESITSGVE 639>XP_005264407 Length = 587 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QSLTSGME 9 +S+TSG+E Sbjct: 473 ESITSGVE 480>XP_005264406 Length = 634 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QSLTSGME 9 +S+TSG+E Sbjct: 485 ESITSGVE 492>XP_005264405 Length = 781 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QSLTSGME 9 +S+TSG+E Sbjct: 632 ESITSGVE 639>NP_055880 Length = 1989 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RQSLTSGME 9 ++ LTSGM+ Sbjct: 1140 KKPLTSGMD 1148>NP_001271165 Length = 1539 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 QSLTSGME 9 QSL GME Sbjct: 445 QSLIEGME 452>NP_065871 Length = 1659 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RQSLTSGME 9 R+SL GME Sbjct: 394 RESLKLGME 402>NP_001098721 Length = 1539 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 QSLTSGME 9 QSL GME Sbjct: 445 QSLIEGME 452>NP_078891 Length = 854 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RQSLTSGM 8 R SLTSG+ Sbjct: 454 RLSLTSGL 461>NP_055548 Length = 1539 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 QSLTSGME 9 QSL GME Sbjct: 445 QSLIEGME 452>NP_001171526 Length = 854 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RQSLTSGM 8 R SLTSG+ Sbjct: 454 RLSLTSGL 461>NP_001271166 Length = 809 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 QSLTSGME 9 QSL GME Sbjct: 445 QSLIEGME 452>NP_001171527 Length = 812 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RQSLTSGM 8 R SLTSG+ Sbjct: 454 RLSLTSGL 461>NP_619648 Length = 523 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QSLTSGME 9 +SLT+G+E Sbjct: 297 RSLTAGLE 304>XP_005271520 Length = 1801 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RQSLTSGME 9 ++ LTSGM+ Sbjct: 952 KKPLTSGMD 960>XP_005271519 Length = 1833 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RQSLTSGME 9 ++ LTSGM+ Sbjct: 984 KKPLTSGMD 992>XP_005271518 Length = 1982 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RQSLTSGME 9 ++ LTSGM+ Sbjct: 1133 KKPLTSGMD 1141>XP_005248691 Length = 816 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 QSLTSGME 9 QSL GME Sbjct: 445 QSLIEGME 452>XP_005248689 Length = 1539 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 QSLTSGME 9 QSL GME Sbjct: 445 QSLIEGME 452>XP_005248654 Length = 607 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RQSLTSGM 8 R SLTSG+ Sbjct: 207 RLSLTSGL 214>XP_005248653 Length = 895 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RQSLTSGM 8 R SLTSG+ Sbjct: 495 RLSLTSGL 502Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.302 0.113 0.272 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 391,438 Number of extensions: 469 Number of successful extensions: 35 Number of sequences better than 10000.0: 35 Number of HSP's gapped: 35 Number of HSP's successfully gapped: 35 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |