Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005179 19 665 NP_733762 19 665 XP_006713860 19 665 XP_006713859 19 665 XP_005247910 19 665 XP_005247909 19 665 NP_037412 17 2528 XP_005273918 17 2528 NP_619542 17 3301 XP_005274600 17 3301 NP_001273560 17 4312 NP_056312 17 4312 NP_001273416 17 4312 XP_006720531 17 4312 XP_005254344 17 4312 XP_006719923 17 4312 XP_006719922 17 4312 XP_006719920 17 4312 XP_005266554 17 4312 XP_005266553 17 4312 XP_006719919 17 4312 XP_005266551 17 4312 XP_005266550 17 4312 XP_005266549 17 4312 XP_006719918 17 4312 XP_005266548 17 4312 NP_004450 16 5631 NP_872579 16 5631 XP_005257218 16 5631 XP_005257217 16 5631 XP_005257216 16 5631 XP_005257215 16 5631 XP_005257214 16 5631 XP_005257213 16 5631 XP_005257212 16 5631 XP_006721834 16 5631 XP_005257211 16 5631 XP_005257210 16 5631 XP_005257209 16 5631 XP_005257208 16 5631 XP_006721833 16 5631 XP_005257207 16 5631 XP_006712555 16 7355 XP_006712554 16 7355 XP_005263717 16 7355 XP_005263716 16 7355 XP_006712553 16 7355 NP_997246 16 7355 NP_004066 15 9605 NP_001155244 15 9605 NP_000860 15 9605 NP_998786 15 9605 NP_114106 15 9605 NP_938205 15 9605 NP_037413 15 9605 XP_005260739 15 9605 XP_005248395 15 9605 XP_005248394 15 9605>NP_005179 Length = 906 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RQNLTKLSL 9 R+NLTKLSL Sbjct: 148 RRNLTKLSL 156>NP_733762 Length = 982 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RQNLTKLSL 9 R+NLTKLSL Sbjct: 140 RRNLTKLSL 148>XP_006713860 Length = 914 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RQNLTKLSL 9 R+NLTKLSL Sbjct: 168 RRNLTKLSL 176>XP_006713859 Length = 966 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RQNLTKLSL 9 R+NLTKLSL Sbjct: 168 RRNLTKLSL 176>XP_005247910 Length = 982 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RQNLTKLSL 9 R+NLTKLSL Sbjct: 140 RRNLTKLSL 148>XP_005247909 Length = 1010 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RQNLTKLSL 9 R+NLTKLSL Sbjct: 168 RRNLTKLSL 176>NP_037412 Length = 674 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 QNLTKLSL 9 QNLT+LSL Sbjct: 248 QNLTELSL 255>XP_005273918 Length = 674 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 QNLTKLSL 9 QNLT+LSL Sbjct: 248 QNLTELSL 255>NP_619542 Length = 1041 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 QNLTKLSL 9 QNLTK++L Sbjct: 87 QNLTKINL 94>XP_005274600 Length = 1059 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 QNLTKLSL 9 QNLTK++L Sbjct: 105 QNLTKINL 112>NP_001273560 Length = 1009 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 QNLTKLSL 9 QN+TKLS+ Sbjct: 664 QNVTKLSV 671>NP_056312 Length = 555 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RQNLTKLSL 9 R+N+ KLSL Sbjct: 392 RRNIVKLSL 400>NP_001273416 Length = 494 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RQNLTKLSL 9 R+N+ KLSL Sbjct: 331 RRNIVKLSL 339>XP_006720531 Length = 415 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RQNLTKLSL 9 R+N+ KLSL Sbjct: 252 RRNIVKLSL 260>XP_005254344 Length = 556 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RQNLTKLSL 9 R+N+ KLSL Sbjct: 393 RRNIVKLSL 401>XP_006719923 Length = 734 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 QNLTKLSL 9 QN+TKLS+ Sbjct: 389 QNVTKLSV 396>XP_006719922 Length = 942 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 QNLTKLSL 9 QN+TKLS+ Sbjct: 677 QNVTKLSV 684>XP_006719920 Length = 999 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 QNLTKLSL 9 QN+TKLS+ Sbjct: 677 QNVTKLSV 684>XP_005266554 Length = 1000 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 QNLTKLSL 9 QN+TKLS+ Sbjct: 677 QNVTKLSV 684>XP_005266553 Length = 1007 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 QNLTKLSL 9 QN+TKLS+ Sbjct: 662 QNVTKLSV 669>XP_006719919 Length = 1009 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 QNLTKLSL 9 QN+TKLS+ Sbjct: 664 QNVTKLSV 671>XP_005266551 Length = 1012 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 QNLTKLSL 9 QN+TKLS+ Sbjct: 667 QNVTKLSV 674>XP_005266550 Length = 1017 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 QNLTKLSL 9 QN+TKLS+ Sbjct: 672 QNVTKLSV 679>XP_005266549 Length = 1019 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 QNLTKLSL 9 QN+TKLS+ Sbjct: 674 QNVTKLSV 681>XP_006719918 Length = 1021 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 QNLTKLSL 9 QN+TKLS+ Sbjct: 676 QNVTKLSV 683>XP_005266548 Length = 1022 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 QNLTKLSL 9 QN+TKLS+ Sbjct: 677 QNVTKLSV 684>NP_004450 Length = 2903 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RQNLTKLS 8 +QN TKLS Sbjct: 2588 KQNATKLS 2595>NP_872579 Length = 2920 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RQNLTKLS 8 +QN TKLS Sbjct: 2605 KQNATKLS 2612>XP_005257218 Length = 2957 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RQNLTKLS 8 +QN TKLS Sbjct: 2642 KQNATKLS 2649>XP_005257217 Length = 2961 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RQNLTKLS 8 +QN TKLS Sbjct: 2588 KQNATKLS 2595>XP_005257216 Length = 3015 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RQNLTKLS 8 +QN TKLS Sbjct: 2642 KQNATKLS 2649>XP_005257215 Length = 3032 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RQNLTKLS 8 +QN TKLS Sbjct: 2659 KQNATKLS 2666>XP_005257214 Length = 3094 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RQNLTKLS 8 +QN TKLS Sbjct: 2721 KQNATKLS 2728>XP_005257213 Length = 3095 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RQNLTKLS 8 +QN TKLS Sbjct: 2722 KQNATKLS 2729>XP_005257212 Length = 3095 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RQNLTKLS 8 +QN TKLS Sbjct: 2722 KQNATKLS 2729>XP_006721834 Length = 3100 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RQNLTKLS 8 +QN TKLS Sbjct: 2785 KQNATKLS 2792>XP_005257211 Length = 3100 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RQNLTKLS 8 +QN TKLS Sbjct: 2785 KQNATKLS 2792>XP_005257210 Length = 3104 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RQNLTKLS 8 +QN TKLS Sbjct: 2731 KQNATKLS 2738>XP_005257209 Length = 3148 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RQNLTKLS 8 +QN TKLS Sbjct: 2785 KQNATKLS 2792>XP_005257208 Length = 3157 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RQNLTKLS 8 +QN TKLS Sbjct: 2784 KQNATKLS 2791>XP_006721833 Length = 3158 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RQNLTKLS 8 +QN TKLS Sbjct: 2785 KQNATKLS 2792>XP_005257207 Length = 3158 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RQNLTKLS 8 +QN TKLS Sbjct: 2785 KQNATKLS 2792>XP_006712555 Length = 1786 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RQNLTKL 7 +QNLTK+ Sbjct: 630 KQNLTKI 636>XP_006712554 Length = 1885 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RQNLTKL 7 +QNLTK+ Sbjct: 729 KQNLTKI 735>XP_005263717 Length = 1953 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RQNLTKL 7 +QNLTK+ Sbjct: 797 KQNLTKI 803>XP_005263716 Length = 1953 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RQNLTKL 7 +QNLTK+ Sbjct: 797 KQNLTKI 803>XP_006712553 Length = 1953 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RQNLTKL 7 +QNLTK+ Sbjct: 797 KQNLTKI 803>NP_997246 Length = 1909 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RQNLTKL 7 +QNLTK+ Sbjct: 797 KQNLTKI 803>NP_004066 Length = 586 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NLTKLSL 9 N+TKLS+ Sbjct: 92 NITKLSI 98>NP_001155244 Length = 463 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NLTKLSL 9 N+TKLS+ Sbjct: 89 NITKLSI 95>NP_000860 Length = 484 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NLTKLSL 9 N+TKLS+ Sbjct: 110 NITKLSI 116>NP_998786 Length = 516 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NLTKLSL 9 N+TKLS+ Sbjct: 110 NITKLSI 116>NP_114106 Length = 514 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RQNLTKLSL 9 R ++TKLSL Sbjct: 34 RTSVTKLSL 42>NP_938205 Length = 649 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 NLTKLSL 9 NLT+LSL Sbjct: 226 NLTELSL 232>NP_037413 Length = 649 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 NLTKLSL 9 NLT+LSL Sbjct: 226 NLTELSL 232>XP_005260739 Length = 649 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 NLTKLSL 9 NLT+LSL Sbjct: 226 NLTELSL 232>XP_005248395 Length = 449 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RQNLTKLSL 9 R ++TKLSL Sbjct: 34 RTSVTKLSL 42>XP_005248394 Length = 513 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RQNLTKLSL 9 R ++TKLSL Sbjct: 33 RTSVTKLSL 41Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.315 0.127 0.305 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 332,511 Number of extensions: 552 Number of successful extensions: 58 Number of sequences better than 10000.0: 58 Number of HSP's gapped: 58 Number of HSP's successfully gapped: 58 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |