Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_055973 17 3301 NP_001243805 17 3301 NP_694856 17 3301 NP_001243806 17 3301 XP_006716811 17 3301 XP_006716810 17 3301 XP_005251476 17 3301 XP_005251475 17 3301 XP_005251473 17 3301 XP_005251474 17 3301 XP_005251472 17 3301 XP_005251471 17 3301 XP_005251470 17 3301 XP_006716809 17 3301 XP_006716808 17 3301 XP_006716807 17 3301 XP_006716806 17 3301 XP_005251468 17 3301 XP_005251467 17 3301 NP_002408 17 4312 NP_001139438 17 4312 XP_006717927 17 4312 NP_000929 17 4312 NP_000157 16 5631 NP_001091111 16 5631 NP_055871 16 5631 NP_001188412 16 7355 NP_001419 16 7355 NP_055752 16 7355 NP_001230124 16 7355 NP_079410 16 7355 NP_689763 16 7355 XP_005256233 16 7355 XP_005256232 16 7355 XP_005256231 16 7355 XP_005256229 16 7355 XP_005256228 16 7355 XP_005256227 16 7355 XP_006721346 16 7355 XP_005256226 16 7355 XP_006721345 16 7355 XP_006721344 16 7355 XP_006721343 16 7355 XP_005256225 16 7355 XP_006717783 16 7355 XP_006717782 16 7355 XP_006714820 16 7355 XP_005268437 16 7355 XP_006710496 16 7355 NP_003360 15 9605 NP_071351 15 9605 XP_006718738 15 9605 XP_006718737 15 9605 XP_006718736 15 9605 XP_005274266 15 9605 XP_005252603 15 9605>NP_055973 Length = 1352 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QKTAIGKV 9 QKT++GK+ Sbjct: 891 QKTSLGKI 898>NP_001243805 Length = 1352 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QKTAIGKV 9 QKT++GK+ Sbjct: 891 QKTSLGKI 898>NP_694856 Length = 1194 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QKTAIGKV 9 QKT++GK+ Sbjct: 733 QKTSLGKI 740>NP_001243806 Length = 1352 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QKTAIGKV 9 QKT++GK+ Sbjct: 891 QKTSLGKI 898>XP_006716811 Length = 1120 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QKTAIGKV 9 QKT++GK+ Sbjct: 891 QKTSLGKI 898>XP_006716810 Length = 1206 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QKTAIGKV 9 QKT++GK+ Sbjct: 733 QKTSLGKI 740>XP_005251476 Length = 1206 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QKTAIGKV 9 QKT++GK+ Sbjct: 733 QKTSLGKI 740>XP_005251475 Length = 1206 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QKTAIGKV 9 QKT++GK+ Sbjct: 733 QKTSLGKI 740>XP_005251473 Length = 1206 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QKTAIGKV 9 QKT++GK+ Sbjct: 733 QKTSLGKI 740>XP_005251474 Length = 1206 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QKTAIGKV 9 QKT++GK+ Sbjct: 733 QKTSLGKI 740>XP_005251472 Length = 1206 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QKTAIGKV 9 QKT++GK+ Sbjct: 733 QKTSLGKI 740>XP_005251471 Length = 1206 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QKTAIGKV 9 QKT++GK+ Sbjct: 733 QKTSLGKI 740>XP_005251470 Length = 1284 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QKTAIGKV 9 QKT++GK+ Sbjct: 891 QKTSLGKI 898>XP_006716809 Length = 1334 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QKTAIGKV 9 QKT++GK+ Sbjct: 891 QKTSLGKI 898>XP_006716808 Length = 1346 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QKTAIGKV 9 QKT++GK+ Sbjct: 891 QKTSLGKI 898>XP_006716807 Length = 1352 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QKTAIGKV 9 QKT++GK+ Sbjct: 891 QKTSLGKI 898>XP_006716806 Length = 1364 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QKTAIGKV 9 QKT++GK+ Sbjct: 891 QKTSLGKI 898>XP_005251468 Length = 1364 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QKTAIGKV 9 QKT++GK+ Sbjct: 891 QKTSLGKI 898>XP_005251467 Length = 1364 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QKTAIGKV 9 QKT++GK+ Sbjct: 891 QKTSLGKI 898>NP_002408 Length = 3256 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RQKTAIGKV 9 R KT++GKV Sbjct: 1632 RLKTSLGKV 1640>NP_001139438 Length = 2896 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RQKTAIGKV 9 R KT++GKV Sbjct: 1272 RLKTSLGKV 1280>XP_006717927 Length = 2406 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RQKTAIGKV 9 R KT++GKV Sbjct: 782 RLKTSLGKV 790>NP_000929 Length = 1174 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QKTAIGKV 9 QKT IGK+ Sbjct: 145 QKTFIGKI 152>NP_000157 Length = 283 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RQKTAIGKV 9 R TAIG+V Sbjct: 15 RHSTAIGRV 23>NP_001091111 Length = 283 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RQKTAIGKV 9 R TAIG+V Sbjct: 15 RHSTAIGRV 23>NP_055871 Length = 758 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RQKTAIGK 8 ++KTA+GK Sbjct: 262 KKKTALGK 269>NP_001188412 Length = 341 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 KTAIGK 8 KTAIGK Sbjct: 135 KTAIGK 140>NP_001419 Length = 434 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 KTAIGK 8 KTAIGK Sbjct: 228 KTAIGK 233>NP_055752 Length = 1132 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RQKTAIGKV 9 RQK +GK+ Sbjct: 69 RQKALVGKL 77>NP_001230124 Length = 219 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RQKTAIGKV 9 RQK +GK+ Sbjct: 69 RQKALVGKL 77>NP_079410 Length = 2881 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RQKTAIGKV 9 ++KT IGK+ Sbjct: 589 KEKTKIGKL 597>NP_689763 Length = 729 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RQKTAIGK 8 R+K+A+GK Sbjct: 704 RRKSALGK 711>XP_005256233 Length = 2391 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RQKTAIGKV 9 ++KT IGK+ Sbjct: 82 KEKTKIGKL 90>XP_005256232 Length = 2424 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RQKTAIGKV 9 ++KT IGK+ Sbjct: 115 KEKTKIGKL 123>XP_005256231 Length = 2573 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RQKTAIGKV 9 ++KT IGK+ Sbjct: 589 KEKTKIGKL 597>XP_005256229 Length = 2881 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RQKTAIGKV 9 ++KT IGK+ Sbjct: 589 KEKTKIGKL 597>XP_005256228 Length = 2882 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RQKTAIGKV 9 ++KT IGK+ Sbjct: 589 KEKTKIGKL 597>XP_005256227 Length = 2897 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RQKTAIGKV 9 ++KT IGK+ Sbjct: 589 KEKTKIGKL 597>XP_006721346 Length = 2898 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RQKTAIGKV 9 ++KT IGK+ Sbjct: 589 KEKTKIGKL 597>XP_005256226 Length = 2898 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RQKTAIGKV 9 ++KT IGK+ Sbjct: 589 KEKTKIGKL 597>XP_006721345 Length = 2898 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RQKTAIGKV 9 ++KT IGK+ Sbjct: 589 KEKTKIGKL 597>XP_006721344 Length = 2898 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RQKTAIGKV 9 ++KT IGK+ Sbjct: 589 KEKTKIGKL 597>XP_006721343 Length = 2898 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RQKTAIGKV 9 ++KT IGK+ Sbjct: 589 KEKTKIGKL 597>XP_005256225 Length = 2898 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RQKTAIGKV 9 ++KT IGK+ Sbjct: 589 KEKTKIGKL 597>XP_006717783 Length = 641 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RQKTAIGKV 9 RQK +GK+ Sbjct: 69 RQKALVGKL 77>XP_006717782 Length = 1089 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RQKTAIGKV 9 RQK +GK+ Sbjct: 69 RQKALVGKL 77>XP_006714820 Length = 729 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RQKTAIGK 8 R+K+A+GK Sbjct: 704 RRKSALGK 711>XP_005268437 Length = 735 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RQKTAIGK 8 R+K+A+GK Sbjct: 710 RRKSALGK 717>XP_006710496 Length = 434 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 KTAIGK 8 KTAIGK Sbjct: 228 KTAIGK 233>NP_003360 Length = 699 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RQKTAIGK 8 RQK A+G+ Sbjct: 253 RQKKALGR 260>NP_071351 Length = 2752 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QKTAIGKV 9 +KT +GKV Sbjct: 2253 RKTVLGKV 2260>XP_006718738 Length = 447 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RQKTAIGK 8 RQK A+G+ Sbjct: 253 RQKKALGR 260>XP_006718737 Length = 458 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RQKTAIGK 8 RQK A+G+ Sbjct: 253 RQKKALGR 260>XP_006718736 Length = 481 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RQKTAIGK 8 RQK A+G+ Sbjct: 253 RQKKALGR 260>XP_005274266 Length = 552 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RQKTAIGK 8 RQK A+G+ Sbjct: 106 RQKKALGR 113>XP_005252603 Length = 1457 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 QKTAIGK 8 +KTA+GK Sbjct: 1440 KKTALGK 1446Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.316 0.128 0.326 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 452,122 Number of extensions: 776 Number of successful extensions: 56 Number of sequences better than 10000.0: 56 Number of HSP's gapped: 56 Number of HSP's successfully gapped: 56 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |