Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006715 19 869 NP_005913 19 869 XP_005267046 19 869 XP_005267045 19 869 NP_002499 17 2528 XP_006711834 17 2528 NP_001244163 17 3301 NP_001244166 17 3301 NP_001244159 17 3301 NP_001244160 17 3301 NP_001093392 17 3301 NP_001561 17 3301 XP_006724764 17 3301 XP_006724763 17 3301 XP_006724762 17 3301 XP_006724761 17 3301 XP_006724760 17 3301 XP_006724759 17 3301 XP_006724758 17 3301 XP_006724757 17 3301 XP_006724756 17 3301 NP_060826 17 4312 NP_001494 16 5631 NP_001276109 16 5631 NP_001276108 16 5631 NP_001276106 16 5631 XP_006722978 16 5631 XP_005249075 16 5631 XP_005275761 16 5631 NP_112186 16 5631 NP_001276107 16 5631 NP_112503 16 7355 NP_002196 16 7355 NP_000094 16 7355 NP_055827 16 7355 NP_001019554 16 7355 NP_036565 16 7355 NP_000848 16 7355 NP_055718 16 7355 NP_703143 16 7355 XP_006720469 16 7355 XP_005254248 16 7355 XP_005254247 16 7355 XP_006719739 16 7355 XP_006719738 16 7355 XP_005269272 16 7355 XP_006719560 16 7355 XP_005269075 16 7355 XP_005263016 16 7355 XP_005246485 16 7355 NP_060458 16 7355 NP_002102 15 9605 NP_542164 15 9605 NP_001438 15 9605 NP_055288 15 9605 NP_055535 15 9605 XP_006722446 15 9605 XP_006722445 15 9605 XP_006722444 15 9605 XP_006722443 15 9605 XP_005270358 15 9605 XP_006714824 15 9605>NP_006715 Length = 1558 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RPFVYKALK 9 RPFV KALK Sbjct: 527 RPFVDKALK 535>NP_005913 Length = 1608 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RPFVYKALK 9 RPFV KALK Sbjct: 527 RPFVDKALK 535>XP_005267046 Length = 1554 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RPFVYKALK 9 RPFV KALK Sbjct: 527 RPFVDKALK 535>XP_005267045 Length = 1604 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RPFVYKALK 9 RPFV KALK Sbjct: 527 RPFVDKALK 535>NP_002499 Length = 1247 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 PFVYKALK 9 PF YKAL+ Sbjct: 312 PFSYKALR 319>XP_006711834 Length = 1156 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 PFVYKALK 9 PF YKAL+ Sbjct: 312 PFSYKALR 319>NP_001244163 Length = 954 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 PFVYKALK 9 PF YK LK Sbjct: 347 PFPYKVLK 354>NP_001244166 Length = 954 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 PFVYKALK 9 PF YK LK Sbjct: 347 PFPYKVLK 354>NP_001244159 Length = 954 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 PFVYKALK 9 PF YK LK Sbjct: 347 PFPYKVLK 354>NP_001244160 Length = 1059 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 PFVYKALK 9 PF YK LK Sbjct: 373 PFPYKVLK 380>NP_001093392 Length = 1137 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 PFVYKALK 9 PF YK LK Sbjct: 451 PFPYKVLK 458>NP_001561 Length = 625 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RPFVYKALK 9 +PFV+K L+ Sbjct: 232 KPFVFKKLR 240>XP_006724764 Length = 861 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 PFVYKALK 9 PF YK LK Sbjct: 451 PFPYKVLK 458>XP_006724763 Length = 901 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 PFVYKALK 9 PF YK LK Sbjct: 451 PFPYKVLK 458>XP_006724762 Length = 903 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 PFVYKALK 9 PF YK LK Sbjct: 451 PFPYKVLK 458>XP_006724761 Length = 1033 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 PFVYKALK 9 PF YK LK Sbjct: 347 PFPYKVLK 354>XP_006724760 Length = 1033 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 PFVYKALK 9 PF YK LK Sbjct: 347 PFPYKVLK 354>XP_006724759 Length = 1033 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 PFVYKALK 9 PF YK LK Sbjct: 347 PFPYKVLK 354>XP_006724758 Length = 1058 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 PFVYKALK 9 PF YK LK Sbjct: 451 PFPYKVLK 458>XP_006724757 Length = 1080 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 PFVYKALK 9 PF YK LK Sbjct: 394 PFPYKVLK 401>XP_006724756 Length = 1124 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 PFVYKALK 9 PF YK LK Sbjct: 451 PFPYKVLK 458>NP_060826 Length = 442 Score = 16.5 bits (31), Expect = 4312 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 PFVYKAL 8 PF+Y+A+ Sbjct: 30 PFIYRAI 36>NP_001494 Length = 840 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FVYKALK 9 F+YKAL+ Sbjct: 341 FIYKALE 347>NP_001276109 Length = 479 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 PFVYKALK 9 P VYKA++ Sbjct: 414 PLVYKAIQ 421>NP_001276108 Length = 638 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 PFVYKALK 9 P VYKA++ Sbjct: 573 PLVYKAIQ 580>NP_001276106 Length = 666 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 PFVYKALK 9 P VYKA++ Sbjct: 601 PLVYKAIQ 608>XP_006722978 Length = 651 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 PFVYKALK 9 P VYKA++ Sbjct: 601 PLVYKAIQ 608>XP_005249075 Length = 677 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FVYKALK 9 F+YKAL+ Sbjct: 178 FIYKALE 184>XP_005275761 Length = 567 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RPFVYK 6 +PFVYK Sbjct: 549 QPFVYK 554>NP_112186 Length = 666 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 PFVYKALK 9 P VYKA++ Sbjct: 601 PLVYKAIQ 608>NP_001276107 Length = 666 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 PFVYKALK 9 P VYKA++ Sbjct: 601 PLVYKAIQ 608>NP_112503 Length = 503 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 RPFVYKAL 8 RPF KAL Sbjct: 145 RPFFMKAL 152>NP_002196 Length = 1049 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VYKALK 9 VYKALK Sbjct: 960 VYKALK 965>NP_000094 Length = 503 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 RPFVYKAL 8 RPF KAL Sbjct: 145 RPFFMKAL 152>NP_055827 Length = 291 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 RPFVYKAL 8 RP VYK L Sbjct: 172 RPVVYKYL 179>NP_001019554 Length = 2385 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 PFVYKA 7 PF+Y+A Sbjct: 632 PFIYRA 637>NP_036565 Length = 1304 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RPFVYKAL 8 RP+V+K L Sbjct: 568 RPYVHKIL 575>NP_000848 Length = 619 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 PFVYK 6 PFVYK Sbjct: 467 PFVYK 471>NP_055718 Length = 2363 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 PFVYKA 7 PF+Y+A Sbjct: 632 PFIYRA 637>NP_703143 Length = 337 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 PFVYKALK 9 PFVY L+ Sbjct: 291 PFVYSLLR 298>XP_006720469 Length = 401 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 RPFVYKAL 8 RPF KAL Sbjct: 43 RPFFMKAL 50>XP_005254248 Length = 503 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 RPFVYKAL 8 RPF KAL Sbjct: 145 RPFFMKAL 152>XP_005254247 Length = 503 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 RPFVYKAL 8 RPF KAL Sbjct: 145 RPFFMKAL 152>XP_006719739 Length = 2306 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 PFVYKA 7 PF+Y+A Sbjct: 575 PFIYRA 580>XP_006719738 Length = 2340 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 PFVYKA 7 PF+Y+A Sbjct: 609 PFIYRA 614>XP_005269272 Length = 2356 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 PFVYKA 7 PF+Y+A Sbjct: 632 PFIYRA 637>XP_006719560 Length = 826 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 PFVYKALK 9 P VY+AL+ Sbjct: 348 PMVYRALE 355>XP_005269075 Length = 929 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 PFVYKALK 9 P VY+AL+ Sbjct: 451 PMVYRALE 458>XP_005263016 Length = 594 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 PFVYK 6 PFVYK Sbjct: 442 PFVYK 446>XP_005246485 Length = 1158 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RPFVYKAL 8 RP+V+K L Sbjct: 422 RPYVHKIL 429>NP_060458 Length = 929 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 PFVYKALK 9 P VY+AL+ Sbjct: 451 PMVYRALE 458>NP_002102 Length = 3144 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 PFVYKALK 9 P V KALK Sbjct: 1429 PLVIKALK 1436>NP_542164 Length = 950 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VYKALK 9 +YKALK Sbjct: 231 IYKALK 236>NP_001438 Length = 4349 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RPFVYKAL 8 +PF Y+AL Sbjct: 2129 KPFDYQAL 2136>NP_055288 Length = 313 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 PFVYKAL 8 PFV+K L Sbjct: 136 PFVFKLL 142>NP_055535 Length = 1235 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RPFVYKA 7 RP+ YKA Sbjct: 210 RPYDYKA 216>XP_006722446 Length = 889 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VYKALK 9 +YKALK Sbjct: 231 IYKALK 236>XP_006722445 Length = 905 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VYKALK 9 +YKALK Sbjct: 231 IYKALK 236>XP_006722444 Length = 914 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VYKALK 9 +YKALK Sbjct: 231 IYKALK 236>XP_006722443 Length = 925 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VYKALK 9 +YKALK Sbjct: 206 IYKALK 211>XP_005270358 Length = 1204 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RPFVYKA 7 RP+ YKA Sbjct: 210 RPYDYKA 216>XP_006714824 Length = 4349 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RPFVYKAL 8 +PF Y+AL Sbjct: 2129 KPFDYQAL 2136Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.334 0.148 0.456 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 530,531 Number of extensions: 657 Number of successful extensions: 62 Number of sequences better than 10000.0: 62 Number of HSP's gapped: 62 Number of HSP's successfully gapped: 62 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |