Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_733751 20 299 XP_006716142 20 299 XP_005250088 20 299 XP_006716141 20 299 XP_005250085 20 299 XP_006716140 20 299 XP_005250084 20 299 XP_005250083 20 299 XP_005250082 20 299 NP_775899 17 3301 NP_056076 16 5631 XP_006714215 16 5631 XP_006714214 16 5631 XP_005262915 16 5631 NP_055806 16 5631 NP_803253 16 7355 NP_076435 16 7355 NP_001012998 16 7355 XP_006724710 16 7355 NP_036525 16 7355 NP_001139134 15 9605 NP_001139133 15 9605 NP_116027 15 9605 NP_004466 15 9605 NP_055872 15 9605 NP_699204 15 9605 NP_055637 15 9605 NP_112569 15 9605 NP_001265275 15 9605 NP_001140099 15 9605 NP_001140062 15 9605 XP_006724100 15 9605 XP_005258606 15 9605 XP_006723100 15 9605 XP_005258010 15 9605 XP_005258009 15 9605 XP_005258007 15 9605 XP_006719852 15 9605 XP_005266357 15 9605 XP_006719851 15 9605 XP_006719850 15 9605 XP_006719849 15 9605 XP_006719848 15 9605 XP_005266356 15 9605 XP_006719847 15 9605 XP_006719846 15 9605 XP_006719845 15 9605 XP_006719844 15 9605 XP_006719843 15 9605 XP_006719842 15 9605 XP_005266059 15 9605 XP_006714988 15 9605 XP_006714987 15 9605 XP_005263436 15 9605 XP_005263435 15 9605 XP_006714353 15 9605 XP_005271241 15 9605 NP_653289 15 9605>NP_733751 Length = 4911 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 PDVASMGM 9 PDVASMGM Sbjct: 2468 PDVASMGM 2475Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 PDVASMGM 9 PDV SMG+ Sbjct: 4119 PDVPSMGL 4126>XP_006716142 Length = 4927 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 PDVASMGM 9 PDVASMGM Sbjct: 2485 PDVASMGM 2492Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 PDVASMGM 9 PDV SMG+ Sbjct: 4135 PDVPSMGL 4142>XP_005250088 Length = 4928 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 PDVASMGM 9 PDVASMGM Sbjct: 2485 PDVASMGM 2492Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 PDVASMGM 9 PDV SMG+ Sbjct: 4136 PDVPSMGL 4143>XP_006716141 Length = 4959 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 PDVASMGM 9 PDVASMGM Sbjct: 2485 PDVASMGM 2492Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 PDVASMGM 9 PDV SMG+ Sbjct: 4167 PDVPSMGL 4174>XP_005250085 Length = 4979 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 PDVASMGM 9 PDVASMGM Sbjct: 2485 PDVASMGM 2492Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 PDVASMGM 9 PDV SMG+ Sbjct: 4191 PDVPSMGL 4198>XP_006716140 Length = 4982 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 PDVASMGM 9 PDVASMGM Sbjct: 2485 PDVASMGM 2492Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 PDVASMGM 9 PDV SMG+ Sbjct: 4190 PDVPSMGL 4197>XP_005250084 Length = 4982 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 PDVASMGM 9 PDVASMGM Sbjct: 2485 PDVASMGM 2492Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 PDVASMGM 9 PDV SMG+ Sbjct: 4190 PDVPSMGL 4197>XP_005250083 Length = 4982 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 PDVASMGM 9 PDVASMGM Sbjct: 2484 PDVASMGM 2491Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 PDVASMGM 9 PDV SMG+ Sbjct: 4190 PDVPSMGL 4197>XP_005250082 Length = 4983 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 PDVASMGM 9 PDVASMGM Sbjct: 2485 PDVASMGM 2492Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 PDVASMGM 9 PDV SMG+ Sbjct: 4191 PDVPSMGL 4198>NP_775899 Length = 4462 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RPDVASMGM 9 RP V S+GM Sbjct: 2898 RPQVKSLGM 2906>NP_056076 Length = 1498 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 PDVASMG 8 PD+AS G Sbjct: 1030 PDIASFG 1036>XP_006714215 Length = 3544 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 PDVASMGM 9 PD+ASM M Sbjct: 1901 PDLASMWM 1908>XP_006714214 Length = 3544 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 PDVASMGM 9 PD+ASM M Sbjct: 1901 PDLASMWM 1908>XP_005262915 Length = 3544 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 PDVASMGM 9 PD+ASM M Sbjct: 1901 PDLASMWM 1908>NP_055806 Length = 3526 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 PDVASMGM 9 PD+ASM M Sbjct: 1883 PDLASMWM 1890>NP_803253 Length = 97 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 PDVASMGM 9 PD+ S+G+ Sbjct: 73 PDIPSLGL 80>NP_076435 Length = 131 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 PDVASMGM 9 PD+ S+G+ Sbjct: 107 PDIPSLGL 114>NP_001012998 Length = 632 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RPDVASMGM 9 +P V+ MGM Sbjct: 513 QPSVSQMGM 521>XP_006724710 Length = 695 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RPDVASMGM 9 +P V+ MGM Sbjct: 513 QPSVSQMGM 521>NP_036525 Length = 1338 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RPDVASMGM 9 RPD S+G+ Sbjct: 1149 RPDTFSLGV 1157>NP_001139134 Length = 466 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RPDVASMG 8 RP +A+MG Sbjct: 230 RPGLATMG 237>NP_001139133 Length = 480 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RPDVASMG 8 RP +A+MG Sbjct: 230 RPGLATMG 237>NP_116027 Length = 480 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RPDVASMG 8 RP +A+MG Sbjct: 230 RPGLATMG 237>NP_004466 Length = 428 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 PDVASMGM 9 PDV MG+ Sbjct: 140 PDVGRMGI 147>NP_055872 Length = 4678 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 PDVASMG 8 PD++ MG Sbjct: 3107 PDISKMG 3113>NP_699204 Length = 450 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 PDVASMG 8 PD+ +MG Sbjct: 271 PDIVTMG 277>NP_055637 Length = 1032 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DVASMGM 9 DVAS+G+ Sbjct: 643 DVASLGL 649>NP_112569 Length = 499 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 PDVASMG 8 PD+ +MG Sbjct: 271 PDIVTMG 277>NP_001265275 Length = 409 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 PDVASMG 8 PD+ +MG Sbjct: 230 PDIVTMG 236>NP_001140099 Length = 441 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 PDVASMG 8 PD+ +MG Sbjct: 213 PDIVTMG 219>NP_001140062 Length = 493 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 PDVASMG 8 PD+ +MG Sbjct: 265 PDIVTMG 271>XP_006724100 Length = 305 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RPDVASMGM 9 RP+ SMG+ Sbjct: 277 RPNFGSMGV 285>XP_005258606 Length = 554 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RPDVASMGM 9 RP+ A +GM Sbjct: 20 RPEEARLGM 28>XP_006723100 Length = 562 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RPDVASMGM 9 RP+ A +GM Sbjct: 20 RPEEARLGM 28>XP_005258010 Length = 351 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 PDVASMGM 9 PDV MG+ Sbjct: 63 PDVGRMGI 70>XP_005258009 Length = 379 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 PDVASMGM 9 PDV MG+ Sbjct: 91 PDVGRMGI 98>XP_005258007 Length = 428 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 PDVASMGM 9 PDV MG+ Sbjct: 140 PDVGRMGI 147>XP_006719852 Length = 4752 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 PDVASMG 8 PD++ MG Sbjct: 3184 PDISKMG 3190>XP_005266357 Length = 4600 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 PDVASMG 8 PD++ MG Sbjct: 3032 PDISKMG 3038>XP_006719851 Length = 4689 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 PDVASMG 8 PD++ MG Sbjct: 3118 PDISKMG 3124>XP_006719850 Length = 4697 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 PDVASMG 8 PD++ MG Sbjct: 3126 PDISKMG 3132>XP_006719849 Length = 4703 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 PDVASMG 8 PD++ MG Sbjct: 3132 PDISKMG 3138>XP_006719848 Length = 4737 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 PDVASMG 8 PD++ MG Sbjct: 3166 PDISKMG 3172>XP_005266356 Length = 4755 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 PDVASMG 8 PD++ MG Sbjct: 3184 PDISKMG 3190>XP_006719847 Length = 4761 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 PDVASMG 8 PD++ MG Sbjct: 3190 PDISKMG 3196>XP_006719846 Length = 4763 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 PDVASMG 8 PD++ MG Sbjct: 3192 PDISKMG 3198>XP_006719845 Length = 4772 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 PDVASMG 8 PD++ MG Sbjct: 3201 PDISKMG 3207>XP_006719844 Length = 4789 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 PDVASMG 8 PD++ MG Sbjct: 3218 PDISKMG 3224>XP_006719843 Length = 4794 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 PDVASMG 8 PD++ MG Sbjct: 3226 PDISKMG 3232>XP_006719842 Length = 4797 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 PDVASMG 8 PD++ MG Sbjct: 3226 PDISKMG 3232>XP_005266059 Length = 252 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 PDVASMG 8 PD+ +MG Sbjct: 73 PDIVTMG 79>XP_006714988 Length = 408 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 PDVASMG 8 PD+ +MG Sbjct: 229 PDIVTMG 235>XP_006714987 Length = 409 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 PDVASMG 8 PD+ +MG Sbjct: 230 PDIVTMG 236>XP_005263436 Length = 1033 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DVASMGM 9 DVAS+G+ Sbjct: 644 DVASLGL 650>XP_005263435 Length = 1033 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DVASMGM 9 DVAS+G+ Sbjct: 644 DVASLGL 650>XP_006714353 Length = 459 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 PDVASMG 8 PD+ +MG Sbjct: 231 PDIVTMG 237>XP_005271241 Length = 314 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RPDVASMGM 9 RP AS+G+ Sbjct: 35 RPSAASVGV 43>NP_653289 Length = 562 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RPDVASMGM 9 RP+ A +GM Sbjct: 20 RPEEARLGM 28Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.321 0.130 0.381 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 536,302 Number of extensions: 711 Number of successful extensions: 67 Number of sequences better than 10000.0: 58 Number of HSP's gapped: 67 Number of HSP's successfully gapped: 67 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |