Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001155973 20 390 NP_055903 20 390 NP_001073896 17 4312 NP_001162593 17 4312 NP_002016 17 4312 NP_001162594 17 4312 NP_001162595 17 4312 NP_001162596 17 4312 NP_001164099 17 4312 XP_005263859 17 4312 NP_001157032 16 5631 NP_689977 16 5631 NP_001007227 16 5631 NP_003554 16 5631 NP_001007230 16 5631 NP_001007228 16 5631 NP_001007231 16 5631 NP_001007229 16 5631 NP_997002 16 5631 NP_001137307 16 5631 NP_006156 16 5631 NP_001265141 16 5631 NP_001265140 16 5631 NP_060675 16 5631 XP_005257781 16 5631 XP_005257780 16 5631 XP_005271626 16 5631 XP_005271625 16 5631 XP_005271624 16 5631 XP_005271623 16 5631 XP_005271622 16 5631 NP_001265381 15 9605 NP_001265380 15 9605 NP_001265382 15 9605 NP_009124 15 9605 NP_009168 15 9605 NP_001005176 15 9605 NP_001007254 15 9605 NP_663782 15 9605 NP_036260 15 9605 NP_006724 15 9605 NP_001118 15 9605 NP_001163801 15 9605 XP_005262168 15 9605 XP_005257995 15 9605 XP_005257994 15 9605 XP_006714136 15 9605 XP_005246315 15 9605 XP_006712289 15 9605 XP_005246314 15 9605 XP_005246313 15 9605 XP_005246312 15 9605 XP_005246311 15 9605 XP_005246310 15 9605 XP_006712288 15 9605 XP_006712287 15 9605 XP_005246309 15 9605 XP_006712286 15 9605 XP_006710516 15 9605 NP_001159491 15 9605 NP_001273 15 9605 NP_001025177 15 9605>NP_001155973 Length = 1833 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RNVSGQNRI 9 RNVSGQ+RI Sbjct: 285 RNVSGQDRI 293>NP_055903 Length = 1723 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RNVSGQNRI 9 RNVSGQ+RI Sbjct: 285 RNVSGQDRI 293>NP_001073896 Length = 1577 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RNVSGQNR 8 +N+SG+NR Sbjct: 1494 KNLSGKNR 1501>NP_001162593 Length = 1276 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RNVSGQN 7 RNVSG N Sbjct: 895 RNVSGNN 901>NP_002016 Length = 1311 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RNVSGQN 7 RNVSG N Sbjct: 928 RNVSGNN 934>NP_001162594 Length = 1301 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RNVSGQN 7 RNVSG N Sbjct: 918 RNVSGNN 924>NP_001162595 Length = 1276 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RNVSGQN 7 RNVSG N Sbjct: 893 RNVSGNN 899>NP_001162596 Length = 1272 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RNVSGQN 7 RNVSG N Sbjct: 889 RNVSGNN 895>NP_001164099 Length = 952 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RNVSGQN 7 RNVSG N Sbjct: 569 RNVSGNN 575>XP_005263859 Length = 1606 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RNVSGQNR 8 +N+SG+NR Sbjct: 1523 KNLSGKNR 1530>NP_001157032 Length = 471 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RNVSGQNRI 9 RN+SGQ + Sbjct: 463 RNLSGQKHV 471>NP_689977 Length = 442 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RNVSGQNRI 9 RN+SGQ + Sbjct: 434 RNLSGQKHV 442>NP_001007227 Length = 374 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NVSGQN 7 N+SGQN Sbjct: 169 NISGQN 174>NP_003554 Length = 374 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NVSGQN 7 N+SGQN Sbjct: 169 NISGQN 174>NP_001007230 Length = 374 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NVSGQN 7 N+SGQN Sbjct: 169 NISGQN 174>NP_001007228 Length = 374 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NVSGQN 7 N+SGQN Sbjct: 169 NISGQN 174>NP_001007231 Length = 374 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NVSGQN 7 N+SGQN Sbjct: 169 NISGQN 174>NP_001007229 Length = 374 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NVSGQN 7 N+SGQN Sbjct: 169 NISGQN 174>NP_997002 Length = 184 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RNVSGQ 6 RNVSGQ Sbjct: 46 RNVSGQ 51>NP_001137307 Length = 1299 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RNVSGQNRI 9 +NV+GQN I Sbjct: 911 QNVTGQNII 919>NP_006156 Length = 1324 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RNVSGQNRI 9 +NV+GQN I Sbjct: 936 QNVTGQNII 944>NP_001265141 Length = 184 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RNVSGQ 6 RNVSGQ Sbjct: 46 RNVSGQ 51>NP_001265140 Length = 184 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RNVSGQ 6 RNVSGQ Sbjct: 46 RNVSGQ 51>NP_060675 Length = 128 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RNVSGQ 6 RNVSGQ Sbjct: 46 RNVSGQ 51>XP_005257781 Length = 374 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NVSGQN 7 N+SGQN Sbjct: 169 NISGQN 174>XP_005257780 Length = 374 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NVSGQN 7 N+SGQN Sbjct: 169 NISGQN 174>XP_005271626 Length = 1294 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RNVSGQNRI 9 +NV+GQN I Sbjct: 995 QNVTGQNII 1003>XP_005271625 Length = 1311 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RNVSGQNRI 9 +NV+GQN I Sbjct: 923 QNVTGQNII 931>XP_005271624 Length = 1311 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RNVSGQNRI 9 +NV+GQN I Sbjct: 923 QNVTGQNII 931>XP_005271623 Length = 1371 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RNVSGQNRI 9 +NV+GQN I Sbjct: 983 QNVTGQNII 991>XP_005271622 Length = 1383 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RNVSGQNRI 9 +NV+GQN I Sbjct: 995 QNVTGQNII 1003>NP_001265381 Length = 807 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RNVSGQN 7 +NV GQN Sbjct: 26 QNVEGQN 32>NP_001265380 Length = 840 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RNVSGQN 7 +NV GQN Sbjct: 26 QNVEGQN 32>NP_001265382 Length = 753 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RNVSGQN 7 +NV GQN Sbjct: 26 QNVEGQN 32>NP_009124 Length = 324 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 RNVSGQNRI 9 +N+SGQ+ + Sbjct: 215 QNISGQDMV 223>NP_009168 Length = 867 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RNVSGQN 7 +NV GQN Sbjct: 26 QNVEGQN 32>NP_001005176 Length = 172 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RNVSGQN 7 +NV GQN Sbjct: 26 QNVEGQN 32>NP_001007254 Length = 604 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RNVSGQNRI 9 RNV QNR+ Sbjct: 544 RNVIYQNRL 552>NP_663782 Length = 939 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RNVSGQNRI 9 RNV GQ+ + Sbjct: 881 RNVEGQDML 889>NP_036260 Length = 919 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 VSGQNRI 9 +SG+NR+ Sbjct: 191 ISGRNRV 197>NP_006724 Length = 756 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 RNVSGQNR 8 +NV QNR Sbjct: 8 KNVQAQNR 15>NP_001118 Length = 949 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RNVSGQNRI 9 RNV GQ+ + Sbjct: 888 RNVEGQDML 896>NP_001163801 Length = 199 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 RNVSGQNR 8 +NV G NR Sbjct: 15 QNVEGNNR 22>XP_005262168 Length = 756 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 RNVSGQNR 8 +NV QNR Sbjct: 8 KNVQAQNR 15>XP_005257995 Length = 951 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RNVSGQNRI 9 RNV GQ+ + Sbjct: 893 RNVEGQDML 901>XP_005257994 Length = 951 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RNVSGQNRI 9 RNV GQ+ + Sbjct: 893 RNVEGQDML 901>XP_006714136 Length = 347 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 RNVSGQNRI 9 +N+SGQ+ + Sbjct: 238 QNISGQDMV 246>XP_005246315 Length = 675 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RNVSGQN 7 +NV GQN Sbjct: 26 QNVEGQN 32>XP_006712289 Length = 750 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RNVSGQN 7 +NV GQN Sbjct: 26 QNVEGQN 32>XP_005246314 Length = 789 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RNVSGQN 7 +NV GQN Sbjct: 26 QNVEGQN 32>XP_005246313 Length = 806 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RNVSGQN 7 +NV GQN Sbjct: 26 QNVEGQN 32>XP_005246312 Length = 817 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RNVSGQN 7 +NV GQN Sbjct: 26 QNVEGQN 32>XP_005246311 Length = 833 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RNVSGQN 7 +NV GQN Sbjct: 26 QNVEGQN 32>XP_005246310 Length = 841 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RNVSGQN 7 +NV GQN Sbjct: 26 QNVEGQN 32>XP_006712288 Length = 845 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RNVSGQN 7 +NV GQN Sbjct: 26 QNVEGQN 32>XP_006712287 Length = 847 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RNVSGQN 7 +NV GQN Sbjct: 6 QNVEGQN 12>XP_005246309 Length = 864 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RNVSGQN 7 +NV GQN Sbjct: 26 QNVEGQN 32>XP_006712286 Length = 867 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RNVSGQN 7 +NV GQN Sbjct: 26 QNVEGQN 32>XP_006710516 Length = 514 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 VSGQNRI 9 +SG+NR+ Sbjct: 191 ISGRNRV 197>NP_001159491 Length = 919 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RNVSGQNRI 9 RNV GQ+ + Sbjct: 861 RNVEGQDML 869>NP_001273 Length = 937 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RNVSGQNRI 9 RNV GQ+ + Sbjct: 879 RNVEGQDML 887>NP_001025177 Length = 951 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RNVSGQNRI 9 RNV GQ+ + Sbjct: 893 RNVEGQDML 901Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.315 0.130 0.349 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 570,801 Number of extensions: 871 Number of successful extensions: 62 Number of sequences better than 10000.0: 62 Number of HSP's gapped: 62 Number of HSP's successfully gapped: 62 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |