Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001155973 21 229 NP_055903 21 229 NP_004159 17 2528 NP_009124 17 2528 NP_663782 17 2528 NP_001118 17 2528 XP_005257995 17 2528 XP_005257994 17 2528 XP_005248388 17 2528 XP_005248386 17 2528 XP_006714136 17 2528 NP_001159491 17 2528 NP_001273 17 2528 NP_001025177 17 2528 NP_612449 17 3301 NP_001654 17 4312 NP_001019398 17 4312 NP_001019397 17 4312 NP_001019399 17 4312 NP_001650 17 4312 NP_001649 17 4312 NP_001269340 17 4312 NP_002703 17 4312 NP_001269338 17 4312 NP_001269343 17 4312 NP_001269339 17 4312 NP_001269342 17 4312 NP_001269341 17 4312 NP_001653 17 4312 XP_006719454 17 4312 XP_005268913 17 4312 NP_004295 16 5631 NP_112191 16 5631 NP_997002 16 5631 NP_001265141 16 5631 NP_001265140 16 5631 NP_059988 16 5631 NP_060675 16 5631 XP_005270251 16 5631 XP_005270250 16 5631 NP_002629 16 5631 NP_689732 16 7355 XP_005246390 16 7355 XP_005246389 16 7355 XP_006712382 16 7355 XP_005246387 16 7355 XP_005246386 16 7355 XP_005246385 16 7355 NP_001001711 16 7355 NP_001651 15 9605 NP_001157032 15 9605 NP_689977 15 9605 NP_001772 15 9605 NP_940905 15 9605 NP_001274748 15 9605 NP_001274749 15 9605 NP_001339 15 9605 NP_003239 15 9605 XP_005259566 15 9605 XP_005259565 15 9605 XP_006711360 15 9605 XP_006711359 15 9605 XP_006711358 15 9605 XP_006711357 15 9605>NP_001155973 Length = 1833 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RNVSGQDKI 9 RNVSGQD+I Sbjct: 285 RNVSGQDRI 293>NP_055903 Length = 1723 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RNVSGQDKI 9 RNVSGQD+I Sbjct: 285 RNVSGQDRI 293>NP_004159 Length = 664 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 RNVSGQDKI 9 R+V+GQD+I Sbjct: 423 RHVNGQDQI 431>NP_009124 Length = 324 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RNVSGQDKI 9 +N+SGQD + Sbjct: 215 QNISGQDMV 223>NP_663782 Length = 939 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RNVSGQDKI 9 RNV GQD + Sbjct: 881 RNVEGQDML 889>NP_001118 Length = 949 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RNVSGQDKI 9 RNV GQD + Sbjct: 888 RNVEGQDML 896>XP_005257995 Length = 951 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RNVSGQDKI 9 RNV GQD + Sbjct: 893 RNVEGQDML 901>XP_005257994 Length = 951 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RNVSGQDKI 9 RNV GQD + Sbjct: 893 RNVEGQDML 901>XP_005248388 Length = 583 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 RNVSGQDKI 9 R+V+GQD+I Sbjct: 423 RHVNGQDQI 431>XP_005248386 Length = 668 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 RNVSGQDKI 9 R+V+GQD+I Sbjct: 423 RHVNGQDQI 431>XP_006714136 Length = 347 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RNVSGQDKI 9 +N+SGQD + Sbjct: 238 QNISGQDMV 246>NP_001159491 Length = 919 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RNVSGQDKI 9 RNV GQD + Sbjct: 861 RNVEGQDML 869>NP_001273 Length = 937 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RNVSGQDKI 9 RNV GQD + Sbjct: 879 RNVEGQDML 887>NP_001025177 Length = 951 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RNVSGQDKI 9 RNV GQD + Sbjct: 893 RNVEGQDML 901>NP_612449 Length = 673 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RNVSGQDK 8 RN+SG DK Sbjct: 499 RNLSGPDK 506>NP_001654 Length = 175 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NVSGQDKI 9 +V GQDKI Sbjct: 63 DVGGQDKI 70>NP_001019398 Length = 181 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NVSGQDKI 9 +V GQDKI Sbjct: 67 DVGGQDKI 74>NP_001019397 Length = 181 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NVSGQDKI 9 +V GQDKI Sbjct: 67 DVGGQDKI 74>NP_001019399 Length = 181 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NVSGQDKI 9 +V GQDKI Sbjct: 67 DVGGQDKI 74>NP_001650 Length = 181 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NVSGQDKI 9 +V GQDKI Sbjct: 67 DVGGQDKI 74>NP_001649 Length = 181 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NVSGQDKI 9 +V GQDKI Sbjct: 67 DVGGQDKI 74>NP_001269340 Length = 237 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RNVSGQDKI 9 RN+ G DK+ Sbjct: 112 RNIEGVDKL 120>NP_002703 Length = 360 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RNVSGQDKI 9 RN+ G DK+ Sbjct: 155 RNIEGVDKL 163>NP_001269338 Length = 317 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RNVSGQDKI 9 RN+ G DK+ Sbjct: 112 RNIEGVDKL 120>NP_001269343 Length = 221 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RNVSGQDKI 9 RN+ G DK+ Sbjct: 96 RNIEGVDKL 104>NP_001269339 Length = 280 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RNVSGQDKI 9 RN+ G DK+ Sbjct: 155 RNIEGVDKL 163>NP_001269342 Length = 301 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RNVSGQDKI 9 RN+ G DK+ Sbjct: 96 RNIEGVDKL 104>NP_001269341 Length = 344 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RNVSGQDKI 9 RN+ G DK+ Sbjct: 139 RNIEGVDKL 147>NP_001653 Length = 180 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NVSGQDKI 9 +V GQDKI Sbjct: 67 DVGGQDKI 74>XP_006719454 Length = 137 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NVSGQDKI 9 +V GQDKI Sbjct: 67 DVGGQDKI 74>XP_005268913 Length = 181 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NVSGQDKI 9 +V GQDKI Sbjct: 67 DVGGQDKI 74>NP_004295 Length = 1620 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VSGQDKI 9 +SG+DKI Sbjct: 638 ISGEDKI 644>NP_112191 Length = 304 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NVSGQDKI 9 NV+GQD I Sbjct: 183 NVTGQDVI 190>NP_997002 Length = 184 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RNVSGQ 6 RNVSGQ Sbjct: 46 RNVSGQ 51>NP_001265141 Length = 184 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RNVSGQ 6 RNVSGQ Sbjct: 46 RNVSGQ 51>NP_001265140 Length = 184 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RNVSGQ 6 RNVSGQ Sbjct: 46 RNVSGQ 51>NP_059988 Length = 368 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RNVSGQD 7 RN++GQD Sbjct: 9 RNMAGQD 15>NP_060675 Length = 128 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RNVSGQ 6 RNVSGQ Sbjct: 46 RNVSGQ 51>XP_005270251 Length = 230 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NVSGQDKI 9 NV+GQD I Sbjct: 183 NVTGQDVI 190>XP_005270250 Length = 304 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NVSGQDKI 9 NV+GQD I Sbjct: 183 NVTGQDVI 190>NP_002629 Length = 117 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NVSGQDKI 9 +V GQDK+ Sbjct: 52 SVKGQDKV 59>NP_689732 Length = 987 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RNVSGQD 7 +NV GQD Sbjct: 859 KNVEGQD 865>XP_005246390 Length = 945 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RNVSGQD 7 +NV GQD Sbjct: 817 KNVEGQD 823>XP_005246389 Length = 978 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RNVSGQD 7 +NV GQD Sbjct: 850 KNVEGQD 856>XP_006712382 Length = 987 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RNVSGQD 7 +NV GQD Sbjct: 859 KNVEGQD 865>XP_005246387 Length = 987 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RNVSGQD 7 +NV GQD Sbjct: 859 KNVEGQD 865>XP_005246386 Length = 987 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RNVSGQD 7 +NV GQD Sbjct: 859 KNVEGQD 865>XP_005246385 Length = 1020 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RNVSGQD 7 +NV GQD Sbjct: 892 KNVEGQD 898>NP_001001711 Length = 396 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RNVSGQDK 8 R VSGQD+ Sbjct: 371 RMVSGQDE 378>NP_001651 Length = 180 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NVSGQDKI 9 +V GQD+I Sbjct: 67 DVGGQDRI 74>NP_001157032 Length = 471 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RNVSGQDKI 9 RN+SGQ + Sbjct: 463 RNLSGQKHV 471>NP_689977 Length = 442 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RNVSGQDKI 9 RN+SGQ + Sbjct: 434 RNLSGQKHV 442>NP_001772 Length = 199 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 NVSGQDK 8 NV+G DK Sbjct: 166 NVTGSDK 172>NP_940905 Length = 1135 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NVSGQD 7 NV+GQD Sbjct: 1123 NVTGQD 1128>NP_001274748 Length = 1111 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NVSGQD 7 NV+GQD Sbjct: 1099 NVTGQD 1104>NP_001274749 Length = 1068 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NVSGQD 7 NV+GQD Sbjct: 1056 NVTGQD 1061>NP_001339 Length = 454 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RNVSGQD 7 RNV G+D Sbjct: 281 RNVRGED 287>NP_003239 Length = 961 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RNVSGQDKI 9 RNV +DK+ Sbjct: 871 RNVGWKDKV 879>XP_005259566 Length = 454 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RNVSGQD 7 RNV G+D Sbjct: 281 RNVRGED 287>XP_005259565 Length = 454 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RNVSGQD 7 RNV G+D Sbjct: 281 RNVRGED 287>XP_006711360 Length = 699 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NVSGQD 7 NV+GQD Sbjct: 687 NVTGQD 692>XP_006711359 Length = 752 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NVSGQD 7 NV+GQD Sbjct: 740 NVTGQD 745>XP_006711358 Length = 1118 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NVSGQD 7 NV+GQD Sbjct: 1106 NVTGQD 1111>XP_006711357 Length = 1142 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NVSGQD 7 NV+GQD Sbjct: 1130 NVTGQD 1135Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.309 0.130 0.342 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 630,051 Number of extensions: 1078 Number of successful extensions: 64 Number of sequences better than 10000.0: 64 Number of HSP's gapped: 64 Number of HSP's successfully gapped: 64 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |