Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_115803 20 390 NP_001243297 18 1935 NP_689672 16 5631 NP_059984 16 5631 XP_006724893 16 5631 XP_005274763 16 5631 XP_006724892 16 5631 XP_005274762 16 5631 XP_006719241 16 5631 XP_006716240 16 5631 NP_004817 16 7355 NP_001277716 16 7355 NP_001268231 16 7355 NP_115756 16 7355 NP_733792 16 7355 NP_940918 16 7355 NP_733781 16 7355 NP_001254 16 7355 XP_005276467 16 7355 XP_006720086 16 7355 XP_006720085 16 7355 XP_006720084 16 7355 XP_006718287 16 7355 XP_006714784 16 7355 XP_005262744 16 7355 XP_005263976 16 7355 NP_006579 16 7355 NP_001068567 15 9605 NP_003717 15 9605 NP_001714 15 9605 NP_002825 15 9605 NP_001264128 15 9605 NP_054903 15 9605 NP_001264129 15 9605 NP_874358 15 9605 XP_006722869 15 9605 XP_005272548 15 9605 XP_005257813 15 9605 XP_005257814 15 9605 XP_005257812 15 9605 XP_006719590 15 9605 XP_006719589 15 9605 XP_005249383 15 9605 XP_006711831 15 9605 NP_065953 15 9605 NP_001073898 15 9605>NP_115803 Length = 1156 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RNVGIMQPT 9 RNVG MQPT Sbjct: 806 RNVGNMQPT 814>NP_001243297 Length = 102 Score = 17.7 bits (34), Expect = 1935 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RNVGIMQP 8 RN+G++QP Sbjct: 30 RNLGLLQP 37>NP_689672 Length = 402 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RNVGIMQP 8 RN+G +QP Sbjct: 331 RNLGSLQP 338>NP_059984 Length = 1871 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 VGIMQP 8 VG+MQP Sbjct: 696 VGVMQP 701>XP_006724893 Length = 1719 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 VGIMQP 8 VG+MQP Sbjct: 696 VGVMQP 701>XP_005274763 Length = 1789 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 VGIMQP 8 VG+MQP Sbjct: 614 VGVMQP 619>XP_006724892 Length = 1841 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 VGIMQP 8 VG+MQP Sbjct: 696 VGVMQP 701>XP_005274762 Length = 1853 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 VGIMQP 8 VG+MQP Sbjct: 696 VGVMQP 701>XP_006719241 Length = 344 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RNVGIMQPT 9 RN GI+ P+ Sbjct: 51 RNAGILAPS 59>XP_006716240 Length = 213 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RNVGIMQP 8 RN+G +QP Sbjct: 15 RNLGSLQP 22>NP_004817 Length = 775 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GIMQPT 9 GI+QPT Sbjct: 586 GILQPT 591>NP_001277716 Length = 773 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GIMQPT 9 GI+QPT Sbjct: 584 GILQPT 589>NP_001268231 Length = 811 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RNVGIM 6 RN+GIM Sbjct: 103 RNIGIM 108>NP_115756 Length = 779 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RNVGIM 6 RN+GIM Sbjct: 71 RNIGIM 76>NP_733792 Length = 732 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RNVGIM 6 RN+GIM Sbjct: 71 RNIGIM 76>NP_940918 Length = 607 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NVGIMQPT 9 +VGI+ PT Sbjct: 515 HVGILSPT 522>NP_733781 Length = 513 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RNVGIM 6 RN+GIM Sbjct: 71 RNIGIM 76>NP_001254 Length = 461 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GIMQPT 9 GI+QPT Sbjct: 453 GILQPT 458>XP_005276467 Length = 97 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 NVGIMQP 8 N+G++QP Sbjct: 91 NLGLLQP 97>XP_006720086 Length = 703 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 NVGIMQP 8 N+G++QP Sbjct: 691 NLGLLQP 697>XP_006720085 Length = 704 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 NVGIMQP 8 N+G++QP Sbjct: 692 NLGLLQP 698>XP_006720084 Length = 730 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 NVGIMQP 8 N+G++QP Sbjct: 718 NLGLLQP 724>XP_006718287 Length = 545 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NVGIMQPT 9 +VGI+ PT Sbjct: 453 HVGILSPT 460>XP_006714784 Length = 734 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RNVGIM 6 RN+GIM Sbjct: 71 RNIGIM 76>XP_005262744 Length = 421 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GIMQPT 9 GI+QPT Sbjct: 413 GILQPT 418>XP_005263976 Length = 227 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GIMQPT 9 GI+QPT Sbjct: 24 GILQPT 29>NP_006579 Length = 302 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GIMQPT 9 GI+QPT Sbjct: 24 GILQPT 29>NP_001068567 Length = 358 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NVGIMQPT 9 +VGI +PT Sbjct: 255 SVGIKEPT 262>NP_003717 Length = 359 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NVGIMQPT 9 +VGI +PT Sbjct: 255 SVGIKEPT 262>NP_001714 Length = 2649 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 RNVGIMQPT 9 RN G + PT Sbjct: 1898 RNTGHLHPT 1906>NP_002825 Length = 593 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NVGIMQ 7 NVG+MQ Sbjct: 582 NVGLMQ 587>NP_001264128 Length = 76 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 NVGIMQPT 9 N+G+ PT Sbjct: 29 NMGVFDPT 36>NP_054903 Length = 139 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 NVGIMQPT 9 N+G+ PT Sbjct: 92 NMGVFDPT 99>NP_001264129 Length = 137 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 NVGIMQPT 9 N+G+ PT Sbjct: 92 NMGVFDPT 99>NP_874358 Length = 631 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VGIMQPT 9 VGI++PT Sbjct: 240 VGIVKPT 246>XP_006722869 Length = 1260 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 NVGIMQPT 9 N+G+ +PT Sbjct: 1073 NLGVKRPT 1080>XP_005272548 Length = 1265 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 NVGIMQPT 9 N+G+ +PT Sbjct: 1078 NLGVKRPT 1085>XP_005257813 Length = 265 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NVGIMQPT 9 +VGI +PT Sbjct: 161 SVGIKEPT 168>XP_005257814 Length = 265 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NVGIMQPT 9 +VGI +PT Sbjct: 161 SVGIKEPT 168>XP_005257812 Length = 341 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NVGIMQPT 9 +VGI +PT Sbjct: 255 SVGIKEPT 262>XP_006719590 Length = 559 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NVGIMQ 7 NVG+MQ Sbjct: 548 NVGLMQ 553>XP_006719589 Length = 597 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NVGIMQ 7 NVG+MQ Sbjct: 586 NVGLMQ 591>XP_005249383 Length = 3186 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 RNVGIMQPT 9 RN G + PT Sbjct: 2435 RNTGHLHPT 2443>XP_006711831 Length = 76 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 NVGIMQPT 9 N+G+ PT Sbjct: 29 NMGVFDPT 36>NP_065953 Length = 1249 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 NVGIMQPT 9 N+G+ +PT Sbjct: 1062 NLGVKRPT 1069>NP_001073898 Length = 1276 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 NVGIMQPT 9 N+G+ +PT Sbjct: 1089 NLGVKRPT 1096Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.321 0.136 0.402 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 619,951 Number of extensions: 1033 Number of successful extensions: 46 Number of sequences better than 10000.0: 46 Number of HSP's gapped: 46 Number of HSP's successfully gapped: 46 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |